RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 RNF5Q99942 180 aa2.81□□□□□ -1.96
SKP1-208ENST00000521216 C11orf70Q9BRQ4 267 aa2.81□□□□□ -1.96
SKP1-208ENST00000521216 DDA1Q9BW61 102 aa2.81□□□□□ -1.96
SKP1-208ENST00000521216 PARD6GQ9BYG4 376 aaPredicted RBP2.81□□□□□ -1.96
SKP1-208ENST00000521216 MIXL1Q9H2W2 232 aa2.81□□□□□ -1.96
SKP1-208ENST00000521216 RGCCQ9H4X1 137 aa2.81□□□□□ -1.96
SKP1-208ENST00000521216 ASB7Q9H672 318 aa2.81□□□□□ -1.96
SKP1-208ENST00000521216 KIR3DX1Q9H7L2 352 aa2.81□□□□□ -1.96
SKP1-208ENST00000521216 EFCAB1Q9HAE3 211 aa2.81□□□□□ -1.96
SKP1-208ENST00000521216 ZNF302Q9NR11 478 aa2.81□□□□□ -1.96
SKP1-208ENST00000521216 FBXO6Q9NRD1 293 aaPredicted RBP2.81□□□□□ -1.96
SKP1-208ENST00000521216 CHRAC1Q9NRG0 131 aa2.81□□□□□ -1.96
SKP1-208ENST00000521216 MCUBQ9NWR8 336 aa2.81□□□□□ -1.96
SKP1-208ENST00000521216 DUX4Q9UBX2 424 aa2.81□□□□□ -1.96
SKP1-208ENST00000521216 TSSC4Q9Y5U2 329 aaPredicted RBP2.81□□□□□ -1.96
SKP1-208ENST00000521216 PLCH2O75038 1416 aa2.81□□□□□ -1.96
SKP1-208ENST00000521216 TOP2BQ02880 1626 aa2.81□□□□□ -1.96
SKP1-208ENST00000521216 RNF17Q9BXT8 1623 aaKnown RBP2.81□□□□□ -1.96
SKP1-208ENST00000521216 LRRIQ1Q96JM4 1722 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 BIVM-ERCC5R4GMW8 1640 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 SYNJ1O43426 1573 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 CUX1P39880 1505 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 SYCP2Q9BX26 1530 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 MED14O60244 1454 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 SNAPC4Q5SXM2 1469 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 NEO1Q92859 1461 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 COL1A2P08123 1366 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 IGLV3-12A0A075B6K2 115 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 A0A0G2JMP0 313 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 ZNF850A8MQ14 1090 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 SUPT3HB4E1H0 165 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 I3L521 148 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 M0QYV0 167 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 PSMD12O00232 456 aaPredicted RBP2.8□□□□□ -1.96
SKP1-208ENST00000521216 PRMT5O14744 637 aaPredicted RBP2.8□□□□□ -1.96
SKP1-208ENST00000521216 RGS5O15539 181 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 DLEU1O43261 78 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 SCN2BO60939 215 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 DNAJB6O75190 326 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 TDP2O95551 362 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 ARG1P05089 322 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 DCNP07585 359 aaKnown RBP2.8□□□□□ -1.96
SKP1-208ENST00000521216 ERGP11308 486 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 SCGB1A1P11684 91 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 IL7P13232 177 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 CCL2P13500 99 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 SRMP19623 302 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 LCN1P31025 176 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 RPS5P46782 204 aaKnown RBP2.8□□□□□ -1.96
SKP1-208ENST00000521216 KCNJ3P48549 501 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 RGS8P57771 180 aaPredicted RBP2.8□□□□□ -1.96
SKP1-208ENST00000521216 RAB10P61026 200 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 RBX1P62877 108 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 SEMG2Q02383 582 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 SP4Q02446 784 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 INCA1Q0VD86 236 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 PSG3Q16557 428 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 BSXQ3C1V8 233 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 TCEAL5Q5H9L2 206 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 CLLU1Q5K131 121 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 CARD17Q5XLA6 110 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 MED27Q6P2C8 311 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 DCUN1D2Q6PH85 259 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 FAM151BQ6UXP7 276 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 CYHR1Q6ZMK1 362 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 GALNT10Q86SR1 603 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 ANGPTL5Q86XS5 388 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 ZBTB8OSQ8IWT0 167 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 C4orf33Q8N1A6 199 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 GTPBP8Q8N3Z3 284 aaPredicted RBP2.8□□□□□ -1.96
SKP1-208ENST00000521216 COX18Q8N8Q8 333 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 OR51A7Q8NH64 312 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 LINC01560Q8TB33 94 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 NUBPLQ8TB37 319 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 APH1BQ8WW43 257 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 AP3S1Q92572 193 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 SLC38A4Q969I6 547 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 MCUR1Q96AQ8 359 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 ISOC1Q96CN7 298 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 C14orf144Q96I85 54 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 EBNA1BP2Q99848 306 aaKnown RBP2.8□□□□□ -1.96
SKP1-208ENST00000521216 C20orf24Q9BUV8 137 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 TMEM109Q9BVC6 243 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 OR52D1Q9H346 318 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 AUNIPQ9H7T9 357 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 CCNB1IP1Q9NPC3 277 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 NIT2Q9NQR4 276 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 IMP3Q9NV31 184 aaKnown RBP2.8□□□□□ -1.96
SKP1-208ENST00000521216 MRPL22Q9NWU5 206 aaKnown RBP2.8□□□□□ -1.96
SKP1-208ENST00000521216 PTTG3PQ9NZH4 202 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 COPZ2Q9P299 210 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 SCP2D1Q9UJQ7 156 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 OR52A1Q9UKL2 312 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 TCHHQ07283 1943 aa2.8□□□□□ -1.96
SKP1-208ENST00000521216 TUBGCP6Q96RT7 1819 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 SPEF2Q9C093 1822 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 CEP152O94986 1710 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 SUPT6HQ7KZ85 1726 aaKnown RBP2.79□□□□□ -1.96
SKP1-208ENST00000521216 HECW1Q76N89 1606 aa2.79□□□□□ -1.96
SKP1-208ENST00000521216 EFCAB5A4FU69 1503 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms