RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 GNB2P62879 340 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 DGCR6Q14129 220 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 QPRTQ15274 297 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 KRTAP27-1Q3LI81 207 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 SAXO2Q658L1 398 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 SNX20Q7Z614 316 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 HS3ST5Q8IZT8 346 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 CYP4Z2PQ8N1L4 340 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 FAM86B1Q8N7N1 296 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 C8orf31Q8N9H6 132 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 OR8J3Q8NGG0 315 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 OR5K2Q8NHB8 316 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 APH1BQ8WW43 257 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 HGDQ93099 445 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 MSANTD3Q96H12 275 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 JSRP1Q96MG2 331 aaPredicted RBP5.15□□□□□ -1.59
LSM1-202ENST00000520286 FOPNLQ96NB1 174 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 TAPBPLQ9BX59 468 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 MFSD1Q9H3U5 465 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 ZC4H2Q9NQZ6 224 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 MMP26Q9NRE1 261 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 MYEF2Q9P2K5 600 aaKnown RBP5.15□□□□□ -1.59
LSM1-202ENST00000520286 RAB23Q9ULC3 237 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 HSPB11Q9Y547 144 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 ASB4Q9Y574 426 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 ALG5Q9Y673 324 aa5.15□□□□□ -1.59
LSM1-202ENST00000520286 CITO14578 2027 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 BAHCC1Q9P281 2608 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 TET1Q8NFU7 2136 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 CIB4A0PJX0 185 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 EFCAB10A6NFE3 127 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 LYRM9A8MSI8 78 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 PEX7O00628 323 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 SCAMP2O15127 329 aaKnown RBP5.14□□□□□ -1.59
LSM1-202ENST00000520286 UTS2O95399 124 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 CNR1P21554 472 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 MSR1P21757 451 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 RPS3P23396 243 aaKnown RBP eCLIP5.14□□□□□ -1.59
LSM1-202ENST00000520286 RGS6P49758 472 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 DAOAP59103 153 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 SNRPD2P62316 118 aaKnown RBP5.14□□□□□ -1.59
LSM1-202ENST00000520286 HOXC5Q00444 222 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 NDPQ00604 133 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 DAZ2Q13117 558 aaKnown RBP5.14□□□□□ -1.59
LSM1-202ENST00000520286 PAFAH1B3Q15102 231 aaKnown RBP5.14□□□□□ -1.59
LSM1-202ENST00000520286 PON2Q15165 354 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 GUCA2BQ16661 112 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 COA6Q5JTJ3 125 aaKnown RBP5.14□□□□□ -1.59
LSM1-202ENST00000520286 ZNF678Q5SXM1 525 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 KRTAP5-3Q6L8H2 238 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 MBOAT1Q6ZNC8 495 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 LINC00173Q6ZV60 143 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 CYP4Z1Q86W10 505 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 ZNF584Q8IVC4 421 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 BBS7Q8IWZ6 715 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 ZNF567Q8N184 647 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.14□□□□□ -1.59
LSM1-202ENST00000520286 NPBQ8NG41 125 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 PPTC7Q8NI37 304 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 NUBPLQ8TB37 319 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 ENKURQ8TC29 256 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 SGTBQ96EQ0 304 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 PHYHIPLQ96FC7 376 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 Q96MT0 163 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 COL21A1Q96P44 957 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 CSPG4P5Q96PW8 444 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 MARVELD1Q9BSK0 173 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 BEX2Q9BXY8 128 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 PRRG3Q9BZD7 231 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 OR51E2Q9H255 320 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 PIGUQ9H490 435 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 DAZ3Q9NR90 486 aaKnown RBP5.14□□□□□ -1.59
LSM1-202ENST00000520286 CTPS2Q9NRF8 586 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 SLC25A37Q9NYZ2 338 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 STOX2Q9P2F5 926 aaPredicted RBP5.14□□□□□ -1.59
LSM1-202ENST00000520286 ORC6Q9Y5N6 252 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 DNAJC15Q9Y5T4 150 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 COL4A4P53420 1690 aaPredicted RBP5.14□□□□□ -1.59
LSM1-202ENST00000520286 SCN2AQ99250 2005 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 TRIOO75962 3097 aa5.14□□□□□ -1.59
LSM1-202ENST00000520286 PDCD11Q14690 1871 aaKnown RBP5.13□□□□□ -1.59
LSM1-202ENST00000520286 TRIP11Q15643 1979 aa5.13□□□□□ -1.59
LSM1-202ENST00000520286 TPRP12270 2363 aaKnown RBP5.13□□□□□ -1.59
LSM1-202ENST00000520286 A0A1B0GW55 424 aa5.13□□□□□ -1.59
LSM1-202ENST00000520286 C7orf66A4D0T2 115 aa5.13□□□□□ -1.59
LSM1-202ENST00000520286 TMEM150BA6NC51 233 aa5.13□□□□□ -1.59
LSM1-202ENST00000520286 KRBOX1C9JBD0 128 aa5.13□□□□□ -1.59
LSM1-202ENST00000520286 F8W036 122 aa5.13□□□□□ -1.59
LSM1-202ENST00000520286 XKRYO14609 159 aa5.13□□□□□ -1.59
LSM1-202ENST00000520286 AZIN1O14977 448 aa5.13□□□□□ -1.59
LSM1-202ENST00000520286 RGS5O15539 181 aa5.13□□□□□ -1.59
LSM1-202ENST00000520286 GATCO43716 136 aaKnown RBP5.13□□□□□ -1.59
LSM1-202ENST00000520286 TRAF3IP2O43734 574 aaPredicted RBP5.13□□□□□ -1.59
LSM1-202ENST00000520286 MFSD11O43934 449 aa5.13□□□□□ -1.59
LSM1-202ENST00000520286 GMDSO60547 372 aa5.13□□□□□ -1.59
LSM1-202ENST00000520286 INSP01308 110 aa5.13□□□□□ -1.59
LSM1-202ENST00000520286 IFNA7P01567 189 aa5.13□□□□□ -1.59
LSM1-202ENST00000520286 IGLV1-47P01700 117 aa5.13□□□□□ -1.59
LSM1-202ENST00000520286 HLA-HP01893 362 aa5.13□□□□□ -1.59
LSM1-202ENST00000520286 APOC1P02654 83 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms