RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 LPCAT4Q643R3 524 aa6.9□□□□□ -1.3
PABPC1-213ENST00000519848 C18orf65Q6ZTR6 163 aa6.9□□□□□ -1.3
PABPC1-213ENST00000519848 GID4Q8IVV7 300 aa6.9□□□□□ -1.3
PABPC1-213ENST00000519848 OR51A2Q8NGJ7 313 aa6.9□□□□□ -1.3
PABPC1-213ENST00000519848 OR4C13Q8NGP0 309 aa6.9□□□□□ -1.3
PABPC1-213ENST00000519848 OR13C9Q8NGT0 318 aa6.9□□□□□ -1.3
PABPC1-213ENST00000519848 APH1BQ8WW43 257 aa6.9□□□□□ -1.3
PABPC1-213ENST00000519848 EMG1Q92979 244 aaKnown RBP6.9□□□□□ -1.3
PABPC1-213ENST00000519848 LEAP2Q969E1 77 aa6.9□□□□□ -1.3
PABPC1-213ENST00000519848 FAM234AQ9H0X4 552 aa6.9□□□□□ -1.3
PABPC1-213ENST00000519848 AURKAIP1Q9NWT8 199 aaPredicted RBP6.9□□□□□ -1.3
PABPC1-213ENST00000519848 WARS2Q9UGM6 360 aaKnown RBP6.9□□□□□ -1.3
PABPC1-213ENST00000519848 GNG8Q9UK08 70 aa6.9□□□□□ -1.3
PABPC1-213ENST00000519848 POLDIP2Q9Y2S7 368 aa6.9□□□□□ -1.3
PABPC1-213ENST00000519848 AP4S1Q9Y587 144 aa6.9□□□□□ -1.3
PABPC1-213ENST00000519848 TMEM14AQ9Y6G1 99 aa6.9□□□□□ -1.3
PABPC1-213ENST00000519848 TRAV39A0A0B4J263 110 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 TRBV2A0A0J9YWF9 115 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 A0A1W2PRX2 142 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 MAGEA13PA6NCF6 341 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 BTBD17A6NE02 478 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 OR2H2O95918 312 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 IGLV1-47P01700 117 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 IGHV3-7P01780 117 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 KRT8P05787 483 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 OR2T7P0C7T2 308 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 CGB3P0DN86 165 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 CGB7P0DN87 165 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 PRKACAP17612 351 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 ATF1P18846 271 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 KPNB1Q14974 876 aaKnown RBP6.89□□□□□ -1.31
PABPC1-213ENST00000519848 ZNF146Q15072 292 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 GRK1Q15835 563 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 ETV3LQ6ZN32 361 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 EGFL6Q8IUX8 553 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 PLPPR1Q8TBJ4 325 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 PHF21AQ96BD5 680 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 FGGYQ96C11 551 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 LGALS12Q96DT0 336 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 C4orf36Q96KX1 117 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 ZNF714Q96N38 554 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 SLC29A1Q99808 456 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 HMG20AQ9NP66 347 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 ING3Q9NXR8 418 aa6.89□□□□□ -1.31
PABPC1-213ENST00000519848 CAB39Q9Y376 341 aaPredicted RBP6.89□□□□□ -1.31
PABPC1-213ENST00000519848 SIRT4Q9Y6E7 314 aaPredicted RBP6.89□□□□□ -1.31
PABPC1-213ENST00000519848 KMT2CQ8NEZ4 4911 aaKnown RBP6.89□□□□□ -1.31
PABPC1-213ENST00000519848 LY6LH3BQJ8 138 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 SLC33A1O00400 549 aaPredicted RBP6.88□□□□□ -1.31
PABPC1-213ENST00000519848 DYNC1I1O14576 645 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 FBXO24O75426 580 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 SULT1C4O75897 302 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 KDM4BO94953 1096 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 ZFPL1O95159 310 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 LALBAP00709 142 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 FASP25445 335 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 GTF2A1P52655 376 aaPredicted RBP6.88□□□□□ -1.31
PABPC1-213ENST00000519848 P2RX3P56373 397 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 KRTAP10-11P60412 298 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 AESQ08117 197 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 PDZK1IP1Q13113 114 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 DYNC1I2Q13409 638 aaKnown RBP6.88□□□□□ -1.31
PABPC1-213ENST00000519848 BLMHQ13867 455 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 ATXN7L3Q14CW9 347 aaPredicted RBP6.88□□□□□ -1.31
PABPC1-213ENST00000519848 CNN3Q15417 329 aaKnown RBP6.88□□□□□ -1.31
PABPC1-213ENST00000519848 SMN1Q16637 294 aaKnown RBP6.88□□□□□ -1.31
PABPC1-213ENST00000519848 C1orf146Q5VVC0 180 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 FDX2Q6P4F2 183 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 C5orf24Q7Z6I8 188 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 ENTHD1Q8IYW4 607 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 FAM58AQ8N1B3 248 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 OR8J1Q8NGP2 316 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 OR13C5Q8NGS8 318 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 OR2T6Q8NHC8 308 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 RNFT2Q96EX2 444 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 HRASLS5Q96KN8 279 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 SNX22Q96L94 193 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 MNTQ99583 582 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 PDCD1LG2Q9BQ51 273 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 NPFFR1Q9GZQ6 430 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 COMMD4Q9H0A8 199 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 TMEM133Q9H2Q1 129 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 HEXA-AS1Q9H8Q6 139 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 AMBNQ9NP70 447 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 HHLA2Q9UM44 414 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 GSTK1Q9Y2Q3 226 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 TBL2Q9Y4P3 447 aaKnown RBP6.88□□□□□ -1.31
PABPC1-213ENST00000519848 LINC00312Q9Y6C7 94 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 SESN1Q9Y6P5 492 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 RYR3Q15413 4870 aa6.88□□□□□ -1.31
PABPC1-213ENST00000519848 COL7A1Q02388 2944 aa6.87□□□□□ -1.31
PABPC1-213ENST00000519848 TRAV24A0A0B4J272 114 aa6.87□□□□□ -1.31
PABPC1-213ENST00000519848 A0A1W2PPI3 338 aa6.87□□□□□ -1.31
PABPC1-213ENST00000519848 K7EIL1 84 aa6.87□□□□□ -1.31
PABPC1-213ENST00000519848 GABRPO00591 440 aa6.87□□□□□ -1.31
PABPC1-213ENST00000519848 HSPB6O14558 160 aa6.87□□□□□ -1.31
PABPC1-213ENST00000519848 SLC16A6O15403 523 aa6.87□□□□□ -1.31
PABPC1-213ENST00000519848 RBP4P02753 201 aa6.87□□□□□ -1.31
PABPC1-213ENST00000519848 CHRM2P08172 466 aa6.87□□□□□ -1.31
PABPC1-213ENST00000519848 DBTP11182 482 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms