RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 ADAM20O43506 726 aa17.49■□□□□ 0.39
LSM6-207ENST00000515311 OR2H2O95918 312 aa17.49■□□□□ 0.39
LSM6-207ENST00000515311 RPS2P15880 293 aaKnown RBP17.49■□□□□ 0.39
LSM6-207ENST00000515311 USF1P22415 310 aaPredicted RBP17.49■□□□□ 0.39
LSM6-207ENST00000515311 LMO1P25800 156 aa17.49■□□□□ 0.39
LSM6-207ENST00000515311 CEBPDP49716 269 aaPredicted RBP17.49■□□□□ 0.39
LSM6-207ENST00000515311 EFNB2P52799 333 aa17.49■□□□□ 0.39
LSM6-207ENST00000515311 PLA2G7Q13093 441 aa17.49■□□□□ 0.39
LSM6-207ENST00000515311 TAF9Q16594 264 aa17.49■□□□□ 0.39
LSM6-207ENST00000515311 LYPD2Q6UXB3 125 aa17.49■□□□□ 0.39
LSM6-207ENST00000515311 NLRC3Q7RTR2 1065 aa17.49■□□□□ 0.39
LSM6-207ENST00000515311 WFDC11Q8NEX6 87 aa17.49■□□□□ 0.39
LSM6-207ENST00000515311 OR5H6Q8NGV6 325 aa17.49■□□□□ 0.39
LSM6-207ENST00000515311 CLDND2Q8NHS1 167 aa17.49■□□□□ 0.39
LSM6-207ENST00000515311 NEIL1Q96FI4 390 aaPredicted RBP17.49■□□□□ 0.39
LSM6-207ENST00000515311 DCUN1D5Q9BTE7 237 aa17.49■□□□□ 0.39
LSM6-207ENST00000515311 NARFLQ9H6Q4 476 aa17.49■□□□□ 0.39
LSM6-207ENST00000515311 SPACA1Q9HBV2 294 aa17.49■□□□□ 0.39
LSM6-207ENST00000515311 A0A096LNT2 108 aa17.48■□□□□ 0.39
LSM6-207ENST00000515311 METTL21EPA6NDL7 271 aa17.48■□□□□ 0.39
LSM6-207ENST00000515311 OR7C1O76099 320 aaPredicted RBP17.48■□□□□ 0.39
LSM6-207ENST00000515311 IGHV2-5P01817 119 aa17.48■□□□□ 0.39
LSM6-207ENST00000515311 WNT2P09544 360 aa17.48■□□□□ 0.39
LSM6-207ENST00000515311 COL10A1Q03692 680 aa17.48■□□□□ 0.39
LSM6-207ENST00000515311 UBE2NLQ5JXB2 153 aa17.48■□□□□ 0.39
LSM6-207ENST00000515311 OR8B3Q8NGG8 313 aa17.48■□□□□ 0.39
LSM6-207ENST00000515311 RAB39BQ96DA2 213 aa17.48■□□□□ 0.39
LSM6-207ENST00000515311 SLC25A38Q96DW6 304 aa17.48■□□□□ 0.39
LSM6-207ENST00000515311 CMTM3Q96MX0 182 aa17.48■□□□□ 0.39
LSM6-207ENST00000515311 OR8B2Q96RD0 313 aa17.48■□□□□ 0.39
LSM6-207ENST00000515311 NXF2Q9GZY0 626 aaKnown RBP17.48■□□□□ 0.39
LSM6-207ENST00000515311 FAM234AQ9H0X4 552 aa17.48■□□□□ 0.39
LSM6-207ENST00000515311 RHBDL2Q9NX52 303 aa17.48■□□□□ 0.39
LSM6-207ENST00000515311 RCC2Q9P258 522 aaKnown RBP17.48■□□□□ 0.39
LSM6-207ENST00000515311 MAB21L2Q9Y586 359 aa17.48■□□□□ 0.39
LSM6-207ENST00000515311 A0A075B6Q4 140 aa17.47■□□□□ 0.39
LSM6-207ENST00000515311 ZNF737O75373 536 aa17.47■□□□□ 0.39
LSM6-207ENST00000515311 SCGNO76038 276 aa17.47■□□□□ 0.39
LSM6-207ENST00000515311 TFF1P04155 84 aa17.47■□□□□ 0.39
LSM6-207ENST00000515311 HEXAP06865 529 aa17.47■□□□□ 0.39
LSM6-207ENST00000515311 ZNF44P15621 663 aa17.47■□□□□ 0.39
LSM6-207ENST00000515311 GABRR1P24046 479 aa17.47■□□□□ 0.39
LSM6-207ENST00000515311 LMO4P61968 165 aa17.47■□□□□ 0.39
LSM6-207ENST00000515311 SCN1BQ07699 218 aa17.47■□□□□ 0.39
LSM6-207ENST00000515311 LOXL1Q08397 574 aaPredicted RBP17.47■□□□□ 0.39
LSM6-207ENST00000515311 FAM216BQ8N7L0 139 aa17.47■□□□□ 0.39
LSM6-207ENST00000515311 SAMD12Q8N8I0 201 aa17.47■□□□□ 0.39
LSM6-207ENST00000515311 OR56B1Q8NGI3 324 aa17.47■□□□□ 0.39
LSM6-207ENST00000515311 NICN1Q9BSH3 213 aa17.47■□□□□ 0.39
LSM6-207ENST00000515311 REG4Q9BYZ8 158 aa17.47■□□□□ 0.39
LSM6-207ENST00000515311 ABCG5Q9H222 651 aa17.47■□□□□ 0.39
LSM6-207ENST00000515311 COMMD3Q9UBI1 195 aa17.47■□□□□ 0.39
LSM6-207ENST00000515311 CTSZQ9UBR2 303 aa17.47■□□□□ 0.39
LSM6-207ENST00000515311 METRNQ9UJH8 293 aa17.47■□□□□ 0.39
LSM6-207ENST00000515311 A3GALT2U3KPV4 340 aa17.47■□□□□ 0.39
LSM6-207ENST00000515311 A0A0A6YYD4 124 aa17.46■□□□□ 0.39
LSM6-207ENST00000515311 TRAV24A0A0B4J272 114 aa17.46■□□□□ 0.39
LSM6-207ENST00000515311 K7N7A8 449 aa17.46■□□□□ 0.39
LSM6-207ENST00000515311 SIRPB1O00241 398 aa17.46■□□□□ 0.39
LSM6-207ENST00000515311 SLC33A1O00400 549 aaPredicted RBP17.46■□□□□ 0.39
LSM6-207ENST00000515311 PITPNBP48739 271 aa17.46■□□□□ 0.39
LSM6-207ENST00000515311 SIGIRRQ6IA17 410 aa17.46■□□□□ 0.39
LSM6-207ENST00000515311 BIVMQ86UB2 503 aa17.46■□□□□ 0.39
LSM6-207ENST00000515311 ZNRF1Q8ND25 227 aa17.46■□□□□ 0.39
LSM6-207ENST00000515311 MCFD2Q8NI22 146 aa17.46■□□□□ 0.39
LSM6-207ENST00000515311 RAB40AQ8WXH6 277 aa17.46■□□□□ 0.39
LSM6-207ENST00000515311 ATG5Q9H1Y0 275 aa17.46■□□□□ 0.39
LSM6-207ENST00000515311 ZNF581Q9P0T4 197 aa17.46■□□□□ 0.39
LSM6-207ENST00000515311 ITGB1BP2Q9UKP3 347 aa17.46■□□□□ 0.39
LSM6-207ENST00000515311 TEX15Q9BXT5 2789 aa17.46■□□□□ 0.39
LSM6-207ENST00000515311 OTOGQ6ZRI0 2925 aa17.46■□□□□ 0.39
LSM6-207ENST00000515311 CREBBPQ92793 2442 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 A0A0A6YYH2 397 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 A0A1B0GW55 424 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 TMEM82A0PJX8 343 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 A6NJ64 397 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 FOXI3A8MTJ6 420 aaPredicted RBP17.45■□□□□ 0.38
LSM6-207ENST00000515311 RNF223E7ERA6 249 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 NDUFB3O43676 98 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 PDCD6O75340 191 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 APOA1P02647 267 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 TK1P04183 234 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 GLAP06280 429 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 DUX4L2P0CJ85 424 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 DUX4L3P0CJ86 424 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 DUX4L4P0CJ87 422 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 DUX4L5P0CJ88 424 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 DUX4L6P0CJ89 424 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 DUX4L7P0CJ90 424 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 FUT3P21217 361 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 VEGFCP49767 419 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 NPY4RP50391 375 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 PDCD1Q15116 288 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 LRRC10Q5BKY1 277 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 RAB12Q6IQ22 244 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 DUX4L9Q6RFH8 374 aaPredicted RBP17.45■□□□□ 0.38
LSM6-207ENST00000515311 ZNF841Q6ZN19 808 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 C17orf107Q6ZR85 190 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 OR8H2Q8N162 312 aa17.45■□□□□ 0.38
LSM6-207ENST00000515311 ASCC1Q8N9N2 400 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms