RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 MFGE8Q08431 387 aaPredicted RBP3.2□□□□□ -1.9
CAST-242ENST00000515063 FOXF1Q12946 379 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 IL11RAQ14626 422 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 MELKQ14680 651 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 EXT1Q16394 746 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 ZNF528Q3MIS6 628 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 KRTCAP3Q53RY4 240 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 RNASE10Q5GAN6 216 aaKnown RBP3.2□□□□□ -1.9
CAST-242ENST00000515063 VAX1Q5SQQ9 334 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 C10orf128Q5T292 105 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 C1orf189Q5VU69 101 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 OR5M10Q6IEU7 315 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 LCN10Q6JVE6 187 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 OPN5Q6U736 354 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 TMPPEQ6ZT21 453 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 LANCL3Q6ZV70 420 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 UTS2BQ765I0 119 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 GALNTL5Q7Z4T8 443 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 LYG2Q86SG7 212 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 BIVMQ86UB2 503 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 NAA40Q86UY6 237 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 COMMD7Q86VX2 200 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 PDZD9Q8IXQ8 264 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 STPG2Q8N412 459 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 BPIFB2Q8N4F0 458 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 FAM89BQ8N5H3 189 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 ARRDC1Q8N5I2 433 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 KCNRGQ8N5I3 272 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 NOXO1Q8NFA2 376 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 TMEM185AQ8NFB2 350 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 OR2M3Q8NG83 312 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 OR56B1Q8NGI3 324 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 OR51S1Q8NGJ8 323 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 OR5M9Q8NGP3 310 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 OR2AJ1Q8NGZ0 328 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 KCNG3Q8TAE7 436 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 M1APQ8TC57 530 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 SSC4DQ8WTU2 575 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 MITD1Q8WV92 249 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 TNFAIP8L1Q8WVP5 186 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 RBPMSQ93062 196 aaKnown RBP3.2□□□□□ -1.9
CAST-242ENST00000515063 SLAMF6Q96DU3 332 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 SPACA9Q96E40 222 aaPredicted RBP3.2□□□□□ -1.9
CAST-242ENST00000515063 PHYHIPLQ96FC7 376 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 ARL5BQ96KC2 179 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 KLHDC3Q9BQ90 382 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 URM1Q9BTM9 101 aaKnown RBP3.2□□□□□ -1.9
CAST-242ENST00000515063 DEFB126Q9BYW3 111 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 REG4Q9BYZ8 158 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 ULBP3Q9BZM4 244 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 OR11A1Q9GZK7 315 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 PBOV1Q9GZY1 135 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 PPA2Q9H2U2 334 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 PTGES2Q9H7Z7 377 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 CA10Q9NS85 328 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 KLRF1Q9NZS2 232 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 COMMD9Q9P000 198 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 B3GAT1Q9P2W7 334 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 CTSFQ9UBX1 484 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 OR2W1Q9Y3N9 320 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 PHF3Q92576 2039 aaKnown RBP3.2□□□□□ -1.9
CAST-242ENST00000515063 BRWD1Q9NSI6 2320 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 KIAA1549Q9HCM3 1950 aa3.2□□□□□ -1.9
CAST-242ENST00000515063 CACNA1EQ15878 2313 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 IGLV5-45A0A087WSX0 123 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 A0A087WV48 116 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 TRBV6-7A0A0A0MS04 114 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 IGKV1D-43A0A0B4J1Z2 117 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 TRBV11-1A0A0K0K1C0 115 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 KANTRA0A1W2PQU2 76 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 LNP1A1A4G5 178 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 RNF222A6NCQ9 220 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 MFSD2BA6NFX1 497 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 GJE1A6NN92 205 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 ZNF726A6NNF4 738 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 CYSRT1A8MQ03 144 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 A8MXK9 166 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 D6RAR5 112 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 GOSR2O14653 212 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 EFNA2O43921 213 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 SDC3O75056 442 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 MPZL1O95297 269 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 DUS4LO95620 317 aaKnown RBP3.19□□□□□ -1.9
CAST-242ENST00000515063 HPP00738 406 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 GP1BAP07359 652 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 NMBP08949 121 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 PTHLHP12272 177 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 ZNF35P13682 527 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 MMP9P14780 707 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 ZNF17P17021 662 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 ZNF43P17038 809 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 BCKDHBP21953 392 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 CD34P28906 385 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 TIMP3P35625 211 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 ZNF93P35789 620 aaPredicted RBP3.19□□□□□ -1.9
CAST-242ENST00000515063 PMELP40967 661 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 RPS27P42677 84 aaKnown RBP3.19□□□□□ -1.9
CAST-242ENST00000515063 GUCA1AP43080 201 aaPredicted RBP3.19□□□□□ -1.9
CAST-242ENST00000515063 BIDP55957 195 aa3.19□□□□□ -1.9
CAST-242ENST00000515063 DSCR4P56555 118 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms