RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 SRRM5B3KS81 715 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 H3BS24 57 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 CSTBP04080 98 aaKnown RBP4.5□□□□□ -1.69
PROM1-211ENST00000511153 ZNF44P15621 663 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 USF1P22415 310 aaPredicted RBP4.5□□□□□ -1.69
PROM1-211ENST00000511153 ZFP36P26651 326 aaKnown RBP4.5□□□□□ -1.69
PROM1-211ENST00000511153 HTR2CP28335 458 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 COL10A1Q03692 680 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 IL24Q13007 206 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 ATXN7L3Q14CW9 347 aaPredicted RBP4.5□□□□□ -1.69
PROM1-211ENST00000511153 TRAM1Q15629 374 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 CTF1Q16619 201 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 DGUOKQ16854 277 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 LTC4SQ16873 150 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 MICBQ29980 383 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 RNASE12Q5GAN4 147 aaKnown RBP4.5□□□□□ -1.69
PROM1-211ENST00000511153 GLT8D1Q68CQ7 371 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 CD200R1LQ6Q8B3 271 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 BIVMQ86UB2 503 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 PDZD9Q8IXQ8 264 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 C1orf87Q8N0U7 546 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 FAM58AQ8N1B3 248 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 PNLDC1Q8NA58 520 aaKnown RBP4.5□□□□□ -1.69
PROM1-211ENST00000511153 ITFG2Q969R8 447 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 C10orf35Q96D05 121 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 GAFA1Q96PS6 74 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 NRIP2Q9BQI9 281 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 DCTN5Q9BTE1 182 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 BARHL1Q9BZE3 327 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 TLNRD1Q9H1K6 362 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 PPA2Q9H2U2 334 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 ZNF665Q9H7R5 613 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 ZMAT3Q9HA38 289 aaKnown RBP4.5□□□□□ -1.69
PROM1-211ENST00000511153 ABCB9Q9NP78 766 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 GFOD1Q9NXC2 390 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 POLDIP2Q9Y2S7 368 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 CEPT1Q9Y6K0 416 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 OTOGQ6ZRI0 2925 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 TLN2Q9Y4G6 2542 aa4.5□□□□□ -1.69
PROM1-211ENST00000511153 A0A0A6YYD4 124 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 TRAV38-1A0A0B4J264 116 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 TMEM272A0A1B0GTI8 110 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 TMEM82A0PJX8 343 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 FAM172BPA6NC97 362 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 NKX6-3A6NJ46 265 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 VWC2LB2RUY7 222 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 DVL1O14640 695 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 PDCD5O14737 125 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 GEMIN2O14893 280 aaKnown RBP4.49□□□□□ -1.69
PROM1-211ENST00000511153 DEGS1O15121 323 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 SOCS1O15524 211 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 NOL3O60936 208 aaKnown RBP4.49□□□□□ -1.69
PROM1-211ENST00000511153 OR7C1O76099 320 aaPredicted RBP4.49□□□□□ -1.69
PROM1-211ENST00000511153 KDM4BO94953 1096 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 OR2H2O95918 312 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 HAND1O96004 215 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 LHBP01229 141 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 ALDOBP05062 364 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 PAX1P15863 534 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 MGMTP16455 207 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 MPZP25189 248 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 PRDX2P32119 198 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 MDH2P40926 338 aaKnown RBP4.49□□□□□ -1.69
PROM1-211ENST00000511153 EDDM3BP56851 147 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 TMEM33P57088 247 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 LMO4P61968 165 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 UNC119Q13432 240 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 SMIM21Q3B7S5 101 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 C2orf76Q3KRA6 126 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 MOGAT2Q3SYC2 334 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 ZNF404Q494X3 552 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 FAM76BQ5HYJ3 339 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 SHEQ5VZ18 495 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 OLFML2AQ68BL7 652 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 STUMQ69YW2 141 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 FAM53AQ6NSI3 398 aaPredicted RBP4.49□□□□□ -1.69
PROM1-211ENST00000511153 SFXN4Q6P4A7 337 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 LRRC28Q86X40 367 aaPredicted RBP4.49□□□□□ -1.69
PROM1-211ENST00000511153 ANKRD13BQ86YJ7 626 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 LRRC75A-AS1Q8N1F1 130 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 MFSD4AQ8N468 514 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 CHST4Q8NCG5 386 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 OR4S1Q8NGB4 309 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 OR51T1Q8NGJ9 327 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 LGALS14Q8TCE9 139 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 Q8TCH9 128 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 NEK7Q8TDX7 302 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 CCDC107Q8WV48 283 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 SLC25A28Q96A46 364 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 FAM3DQ96BQ1 224 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 C12orf43Q96C57 262 aaKnown RBP4.49□□□□□ -1.69
PROM1-211ENST00000511153 ISOC1Q96CN7 298 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 PKIBQ9C010 78 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 DCSTAMPQ9H295 470 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 HMG20AQ9NP66 347 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 MMP26Q9NRE1 261 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 COMMD3Q9UBI1 195 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 OR5V1Q9UGF6 321 aa4.49□□□□□ -1.69
PROM1-211ENST00000511153 ELF5Q9UKW6 265 aaPredicted RBP4.49□□□□□ -1.69
PROM1-211ENST00000511153 ST3GAL6Q9Y274 331 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms