RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 ZDHHC16Q969W1 377 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 ANAPC16Q96DE5 110 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 TRAF4Q9BUZ4 470 aaPredicted RBP9.37□□□□□ -0.91
NEK1-206ENST00000510533 CXXC4Q9H2H0 198 aa9.37□□□□□ -0.91
NEK1-206ENST00000510533 A0A1B0GTQ1 180 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 A0A1W2PQD3 144 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 DRD3P35462 400 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 HYAL1Q12794 435 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 IRF3Q14653 427 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 SSPNQ14714 243 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 TSPO2Q5TGU0 170 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 TGIF2LXQ8IUE1 241 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 GSX1Q9H4S2 264 aaPredicted RBP9.36□□□□□ -0.91
NEK1-206ENST00000510533 TMEM167BQ9NRX6 74 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 DOK5Q9P104 306 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 CAMPP49913 170 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 PPP1CAP62136 330 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 ZNF784Q8NCA9 323 aaPredicted RBP9.36□□□□□ -0.91
NEK1-206ENST00000510533 PTP4A1Q93096 173 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 TM4SF19Q96DZ7 209 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 RNF2Q99496 336 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 HSD17B10Q99714 261 aaKnown RBP9.36□□□□□ -0.91
NEK1-206ENST00000510533 GPR87Q9BY21 358 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 FAM60AQ9NP50 221 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 PLA2G10O15496 165 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 LSM6P62312 80 aaKnown RBP9.36□□□□□ -0.91
NEK1-206ENST00000510533 TNFAIP6P98066 277 aaPredicted RBP9.36□□□□□ -0.91
NEK1-206ENST00000510533 KLF9Q13886 244 aaPredicted RBP9.36□□□□□ -0.91
NEK1-206ENST00000510533 CEBPEQ15744 281 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 CD226Q15762 336 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 NCMAPQ5T1S8 102 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 VWA1Q6PCB0 445 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 DEFB123Q8N688 67 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 OR4S2Q8NH73 311 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 NUBPLQ8TB37 319 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 C10orf35Q96D05 121 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 ADTRPQ96IZ2 230 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 SLC7A10Q9NS82 523 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 BET1LQ9NYM9 111 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 OR6C3Q9NZP0 311 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 ITGB4P16144 1822 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 UBE2L3P68036 154 aaKnown RBP9.36□□□□□ -0.91
NEK1-206ENST00000510533 PSG6Q00889 435 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 SLC26A10Q8NG04 563 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 PRSS50Q9UI38 385 aa9.36□□□□□ -0.91
NEK1-206ENST00000510533 CHST1O43916 411 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 CRISP2P16562 243 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 VDAC1P21796 283 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 MNX1P50219 401 aaPredicted RBP9.35□□□□□ -0.91
NEK1-206ENST00000510533 RAC3P60763 192 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 ZNF260Q3ZCT1 412 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 LGALSLQ3ZCW2 172 aaPredicted RBP9.35□□□□□ -0.91
NEK1-206ENST00000510533 CBLN2Q8IUK8 224 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 ISOC2Q96AB3 205 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 OR10C1Q96KK4 312 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 VSTM2LQ96N03 204 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 CCL27Q9Y4X3 112 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 TRPM3Q9HCF6 1732 aaPredicted RBP9.35□□□□□ -0.91
NEK1-206ENST00000510533 RREB1Q92766 1687 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 B4DEV8 164 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 LYZL6O75951 148 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 CD160O95971 181 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 TTRP02766 147 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 CELA2BP08218 269 aaPredicted RBP9.35□□□□□ -0.91
NEK1-206ENST00000510533 COL9A1P20849 921 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 KLF3P57682 345 aaPredicted RBP9.35□□□□□ -0.91
NEK1-206ENST00000510533 COL19A1Q14993 1142 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 HFEQ30201 348 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 C1QL3Q5VWW1 255 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 OR10G8Q8NGN5 311 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 RPP25Q9BUL9 199 aaKnown RBP9.35□□□□□ -0.91
NEK1-206ENST00000510533 TECRQ9NZ01 308 aaKnown RBP9.35□□□□□ -0.91
NEK1-206ENST00000510533 ZMAT5Q9UDW3 170 aaKnown RBP9.35□□□□□ -0.91
NEK1-206ENST00000510533 LIPT2A6NK58 231 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 OR4C45A6NMZ5 311 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 IGF2P01344 180 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 PRRX1P54821 245 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 R3HDM4Q96D70 268 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 MSL2Q9HCI7 577 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 THYN1Q9P016 225 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 LINC00862A6NCI5 91 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 CDRT15L2A8MXV6 281 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 C11orf94C9JXX5 98 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 NTN1O95631 604 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 FAM87AP0C7U9 286 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 ZNF250P15622 560 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 ORM2P19652 201 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 PRSS12P56730 875 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 NEU3Q9UQ49 428 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 AMDHD2Q9Y303 409 aa9.35□□□□□ -0.91
NEK1-206ENST00000510533 C3orf80F5H4A9 247 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 F5H697 171 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 M0R143 59 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 MT-CO3P00414 261 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 DAOP14920 347 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 ISXQ2M1V0 245 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 COX19Q49B96 90 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 TMEM92Q6UXU6 159 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 CCL17Q92583 94 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 SF3B5Q9BWJ5 86 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms