RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 EFNB2P52799 333 aa17.84■□□□□ 0.45
PACRGL-220ENST00000508952 RAB40BQ12829 278 aa17.84■□□□□ 0.45
PACRGL-220ENST00000508952 HIST2H2BDQ6DRA6 164 aa17.84■□□□□ 0.45
PACRGL-220ENST00000508952 TRAPPC6BQ86SZ2 158 aa17.84■□□□□ 0.45
PACRGL-220ENST00000508952 FOXRED1Q96CU9 486 aaPredicted RBP17.84■□□□□ 0.45
PACRGL-220ENST00000508952 MYCBPQ99417 103 aaPredicted RBP17.84■□□□□ 0.45
PACRGL-220ENST00000508952 NKX3-1Q99801 234 aaPredicted RBP17.84■□□□□ 0.45
PACRGL-220ENST00000508952 PDCD1LG2Q9BQ51 273 aa17.84■□□□□ 0.45
PACRGL-220ENST00000508952 INPP5EQ9NRR6 644 aa17.84■□□□□ 0.45
PACRGL-220ENST00000508952 SESN1Q9Y6P5 492 aa17.84■□□□□ 0.45
PACRGL-220ENST00000508952 KIAA2026Q5HYC2 2103 aa17.83■□□□□ 0.45
PACRGL-220ENST00000508952 SH2D1BO14796 132 aa17.83■□□□□ 0.44
PACRGL-220ENST00000508952 KDM4BO94953 1096 aa17.83■□□□□ 0.44
PACRGL-220ENST00000508952 HCKP08631 526 aa17.83■□□□□ 0.44
PACRGL-220ENST00000508952 JUNBP17275 347 aaPredicted RBP17.83■□□□□ 0.44
PACRGL-220ENST00000508952 P2RX3P56373 397 aa17.83■□□□□ 0.44
PACRGL-220ENST00000508952 SMN1Q16637 294 aaKnown RBP17.83■□□□□ 0.44
PACRGL-220ENST00000508952 LIAT1Q6ZQX7 453 aa17.83■□□□□ 0.44
PACRGL-220ENST00000508952 OR5AK2Q8NH90 309 aa17.83■□□□□ 0.44
PACRGL-220ENST00000508952 OR2T6Q8NHC8 308 aa17.83■□□□□ 0.44
PACRGL-220ENST00000508952 MALSU1Q96EH3 234 aa17.83■□□□□ 0.44
PACRGL-220ENST00000508952 RANBP3Q9H6Z4 567 aaPredicted RBP17.83■□□□□ 0.44
PACRGL-220ENST00000508952 ABCB10Q9NRK6 738 aa17.83■□□□□ 0.44
PACRGL-220ENST00000508952 FOXJ3Q9UPW0 622 aa17.83■□□□□ 0.44
PACRGL-220ENST00000508952 TMEM212A6NML5 194 aa17.82■□□□□ 0.44
PACRGL-220ENST00000508952 MMP23AO75900 390 aa17.82■□□□□ 0.44
PACRGL-220ENST00000508952 BAG2O95816 211 aa17.82■□□□□ 0.44
PACRGL-220ENST00000508952 ERP29P30040 261 aaKnown RBP17.82■□□□□ 0.44
PACRGL-220ENST00000508952 GBX2P52951 348 aaPredicted RBP17.82■□□□□ 0.44
PACRGL-220ENST00000508952 SCN1BQ07699 218 aa17.82■□□□□ 0.44
PACRGL-220ENST00000508952 CCBE1Q6UXH8 406 aaPredicted RBP17.82■□□□□ 0.44
PACRGL-220ENST00000508952 TMEM219Q86XT9 240 aa17.82■□□□□ 0.44
PACRGL-220ENST00000508952 TSEN15Q8WW01 171 aaKnown RBP17.82■□□□□ 0.44
PACRGL-220ENST00000508952 NPFFR1Q9GZQ6 430 aa17.82■□□□□ 0.44
PACRGL-220ENST00000508952 COMMD4Q9H0A8 199 aa17.82■□□□□ 0.44
PACRGL-220ENST00000508952 TMEM133Q9H2Q1 129 aa17.82■□□□□ 0.44
PACRGL-220ENST00000508952 DHDHQ9UQ10 334 aa17.82■□□□□ 0.44
PACRGL-220ENST00000508952 TCF19Q9Y242 345 aa17.82■□□□□ 0.44
PACRGL-220ENST00000508952 RPL36Q9Y3U8 105 aaKnown RBP17.82■□□□□ 0.44
PACRGL-220ENST00000508952 HILPDAQ9Y5L2 63 aa17.82■□□□□ 0.44
PACRGL-220ENST00000508952 IGHV2-26A0A0B4J1V2 119 aa17.81■□□□□ 0.44
PACRGL-220ENST00000508952 SULT1B1O43704 296 aa17.81■□□□□ 0.44
PACRGL-220ENST00000508952 LIMS3P0CW19 117 aa17.81■□□□□ 0.44
PACRGL-220ENST00000508952 LIMS4P0CW20 117 aa17.81■□□□□ 0.44
PACRGL-220ENST00000508952 GTF2A1P52655 376 aaPredicted RBP17.81■□□□□ 0.44
PACRGL-220ENST00000508952 IL18R1Q13478 541 aa17.81■□□□□ 0.44
PACRGL-220ENST00000508952 KISS1Q15726 138 aa17.81■□□□□ 0.44
PACRGL-220ENST00000508952 PRAMEF5Q5TYX0 476 aa17.81■□□□□ 0.44
PACRGL-220ENST00000508952 LPCAT4Q643R3 524 aa17.81■□□□□ 0.44
PACRGL-220ENST00000508952 SERPINA12Q8IW75 414 aa17.81■□□□□ 0.44
PACRGL-220ENST00000508952 SAXO1Q8IYX7 474 aa17.81■□□□□ 0.44
PACRGL-220ENST00000508952 KLHDC1Q8N7A1 406 aa17.81■□□□□ 0.44
PACRGL-220ENST00000508952 C11orf44Q8N8P7 122 aa17.81■□□□□ 0.44
PACRGL-220ENST00000508952 OR5D14Q8NGL3 314 aa17.81■□□□□ 0.44
PACRGL-220ENST00000508952 FAM110DQ8TAY7 271 aaPredicted RBP17.81■□□□□ 0.44
PACRGL-220ENST00000508952 RPS4Y2Q8TD47 263 aa17.81■□□□□ 0.44
PACRGL-220ENST00000508952 MRPS18AQ9NVS2 196 aaKnown RBP17.81■□□□□ 0.44
PACRGL-220ENST00000508952 PCDHGB5Q9Y5G0 923 aa17.81■□□□□ 0.44
PACRGL-220ENST00000508952 A6NDX4 124 aa17.8■□□□□ 0.44
PACRGL-220ENST00000508952 WBP4O75554 376 aaKnown RBP17.8■□□□□ 0.44
PACRGL-220ENST00000508952 CCDC159P0C7I6 412 aa17.8■□□□□ 0.44
PACRGL-220ENST00000508952 TMEM225BP0DP42 221 aa17.8■□□□□ 0.44
PACRGL-220ENST00000508952 ZNF44P15621 663 aa17.8■□□□□ 0.44
PACRGL-220ENST00000508952 GLIPR1P48060 266 aa17.8■□□□□ 0.44
PACRGL-220ENST00000508952 ZP1P60852 638 aa17.8■□□□□ 0.44
PACRGL-220ENST00000508952 AESQ08117 197 aa17.8■□□□□ 0.44
PACRGL-220ENST00000508952 MRPL28Q13084 256 aaKnown RBP17.8■□□□□ 0.44
PACRGL-220ENST00000508952 HABP2Q14520 560 aaPredicted RBP17.8■□□□□ 0.44
PACRGL-220ENST00000508952 HERPUD1Q15011 391 aa17.8■□□□□ 0.44
PACRGL-220ENST00000508952 C2orf68Q2NKX9 166 aa17.8■□□□□ 0.44
PACRGL-220ENST00000508952 KLHL22Q53GT1 634 aa17.8■□□□□ 0.44
PACRGL-220ENST00000508952 Q6P435 159 aa17.8■□□□□ 0.44
PACRGL-220ENST00000508952 BAIAP2L2Q6UXY1 529 aa17.8■□□□□ 0.44
PACRGL-220ENST00000508952 Q6ZTK2 550 aa17.8■□□□□ 0.44
PACRGL-220ENST00000508952 PARP16Q8N5Y8 322 aa17.8■□□□□ 0.44
PACRGL-220ENST00000508952 NDNFQ8TB73 568 aa17.8■□□□□ 0.44
PACRGL-220ENST00000508952 CLEC7AQ9BXN2 247 aa17.8■□□□□ 0.44
PACRGL-220ENST00000508952 ZNF702PQ9H963 129 aa17.8■□□□□ 0.44
PACRGL-220ENST00000508952 ING3Q9NXR8 418 aa17.8■□□□□ 0.44
PACRGL-220ENST00000508952 SMPD3Q9NY59 655 aaPredicted RBP17.8■□□□□ 0.44
PACRGL-220ENST00000508952 UBE2J1Q9Y385 318 aaPredicted RBP17.8■□□□□ 0.44
PACRGL-220ENST00000508952 TGP01266 2768 aa17.79■□□□□ 0.44
PACRGL-220ENST00000508952 TRGV10A0A0A0MS01 117 aa17.79■□□□□ 0.44
PACRGL-220ENST00000508952 VSIG10L2P0DP72 767 aa17.79■□□□□ 0.44
PACRGL-220ENST00000508952 ZNF555Q8NEP9 628 aa17.79■□□□□ 0.44
PACRGL-220ENST00000508952 RGP1Q92546 391 aaPredicted RBP17.79■□□□□ 0.44
PACRGL-220ENST00000508952 A0A0G2JK05 382 aa17.78■□□□□ 0.44
PACRGL-220ENST00000508952 FAM172BPA6NC97 362 aa17.78■□□□□ 0.44
PACRGL-220ENST00000508952 F2RL2O00254 374 aa17.78■□□□□ 0.44
PACRGL-220ENST00000508952 ALX3O95076 343 aa17.78■□□□□ 0.44
PACRGL-220ENST00000508952 CLIC3O95833 236 aa17.78■□□□□ 0.44
PACRGL-220ENST00000508952 CSF1P09603 554 aa17.78■□□□□ 0.44
PACRGL-220ENST00000508952 LMO1P25800 156 aa17.78■□□□□ 0.44
PACRGL-220ENST00000508952 SOX2P48431 317 aa17.78■□□□□ 0.44
PACRGL-220ENST00000508952 SLC34A1Q06495 639 aa17.78■□□□□ 0.44
PACRGL-220ENST00000508952 CDK5R1Q15078 307 aa17.78■□□□□ 0.44
PACRGL-220ENST00000508952 PDLIM3Q53GG5 364 aaPredicted RBP17.78■□□□□ 0.44
PACRGL-220ENST00000508952 MINOS1Q5TGZ0 78 aa17.78■□□□□ 0.44
PACRGL-220ENST00000508952 ZNF691Q5VV52 312 aa17.78■□□□□ 0.44
PACRGL-220ENST00000508952 XAF1Q6GPH4 301 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms