RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 TMEM9Q9P0T7 183 aa3.29□□□□□ -1.88
LINC01088-203ENST00000507476 VPS29Q9UBQ0 182 aa3.29□□□□□ -1.88
LINC01088-203ENST00000507476 GLS2Q9UI32 602 aa3.29□□□□□ -1.88
LINC01088-203ENST00000507476 RAB26Q9ULW5 256 aa3.29□□□□□ -1.88
LINC01088-203ENST00000507476 SNAPC4Q5SXM2 1469 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 ZNF705GA8MUZ8 300 aaPredicted RBP3.28□□□□□ -1.88
LINC01088-203ENST00000507476 H3BP45 60 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 ARL6IP5O75915 188 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 IGKV5-2P06315 115 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 TDGF1P13385 188 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 PRTN3P24158 256 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 CCR7P32248 378 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 CD70P32970 193 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 PRSS3P35030 304 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 PMELP40967 661 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 LGALS7P47929 136 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 TDGF1P3P51864 188 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 RPL23P62829 140 aaKnown RBP3.28□□□□□ -1.88
LINC01088-203ENST00000507476 SLC35A2P78381 396 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 GTF2BQ00403 316 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 ERCC8Q13216 396 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 TAF1AQ15573 450 aaPredicted RBP3.28□□□□□ -1.88
LINC01088-203ENST00000507476 SLC9A3R2Q15599 337 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 HIST3H3Q16695 136 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 C4orf26Q17RF5 130 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 ZNF658BQ4V348 819 aaPredicted RBP3.28□□□□□ -1.88
LINC01088-203ENST00000507476 TMEM255AQ5JRV8 349 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 UBE2NLQ5JXB2 153 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 CASC10Q5T4H9 136 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 TMEM236Q5W0B7 351 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 KCTD16Q68DU8 428 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 ASB13Q8WXK3 278 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 RAD51AP1Q96B01 352 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 PPCDCQ96CD2 204 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 FAM19A4Q96LR4 140 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 ZIM3Q96PE6 472 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 TMEM243Q9BU79 118 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 MROQ9BYG7 248 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 VNN3Q9NY84 501 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 FBXO5Q9UKT4 447 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 NEUROG3Q9Y4Z2 214 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 INSIG2Q9Y5U4 225 aa3.28□□□□□ -1.88
LINC01088-203ENST00000507476 F11RQ9Y624 299 aaKnown RBP3.28□□□□□ -1.88
LINC01088-203ENST00000507476 EIF3AQ14152 1382 aaKnown RBP3.27□□□□□ -1.89
LINC01088-203ENST00000507476 TNRQ92752 1358 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 IGHV3-74A0A0B4J1X5 117 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 A0A0U1RQV1 116 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 NDUFC2-KCTD14E9PQ53 114 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 M0R1X1 148 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 CNIH1O95406 144 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 IGKV1D-16P01601 117 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 TRBV12-3P01733 135 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 ME2P23368 584 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 UBE2AP49459 152 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 RPL19P84098 196 aaKnown RBP3.27□□□□□ -1.89
LINC01088-203ENST00000507476 C1DQ13901 141 aaKnown RBP3.27□□□□□ -1.89
LINC01088-203ENST00000507476 FAM53BQ14153 422 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 IRF4Q15306 451 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 C1orf195Q5TG92 126 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 TRIQKQ629K1 86 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 DNAJC24Q6P3W2 148 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 FBXW12Q6X9E4 464 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 OLIG3Q7RTU3 272 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 RIMKLAQ8IXN7 391 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 TBC1D19Q8N5T2 526 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 ZNF525Q8N782 197 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 GATD1Q8NB37 220 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 OR1M1Q8NGA1 313 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 OR4M2Q8NGB6 313 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 OR4C13Q8NGP0 309 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 OR1J4Q8NGS1 313 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 C7orf33Q8WU49 177 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 TWIST2Q8WVJ9 160 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 GTSF1Q8WW33 167 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 DYDC1Q8WWB3 177 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 RDH5Q92781 318 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 RNF185Q96GF1 192 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 PRRT1Q99946 306 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 PAXXQ9BUH6 204 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 ZNF702PQ9H963 129 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 C8orf4Q9NR00 106 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 PARVAQ9NVD7 372 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 RBFOX1Q9NWB1 397 aaKnown RBP3.27□□□□□ -1.89
LINC01088-203ENST00000507476 GLTPQ9NZD2 209 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 POLR1DQ9Y2S0 133 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 MMACHCQ9Y4U1 282 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 ADAMTSL3P82987 1691 aa3.27□□□□□ -1.89
LINC01088-203ENST00000507476 CFAP65Q6ZU64 1925 aaKnown RBP3.27□□□□□ -1.89
LINC01088-203ENST00000507476 DENND4AQ7Z401 1863 aa3.26□□□□□ -1.89
LINC01088-203ENST00000507476 ZBED9Q6R2W3 1325 aa3.26□□□□□ -1.89
LINC01088-203ENST00000507476 ZNF608Q9ULD9 1512 aaPredicted RBP3.26□□□□□ -1.89
LINC01088-203ENST00000507476 PGPA6NDG6 321 aa3.26□□□□□ -1.89
LINC01088-203ENST00000507476 TMEM238C9JI98 176 aa3.26□□□□□ -1.89
LINC01088-203ENST00000507476 KPNA3O00505 521 aaPredicted RBP3.26□□□□□ -1.89
LINC01088-203ENST00000507476 MFNGO00587 321 aa3.26□□□□□ -1.89
LINC01088-203ENST00000507476 SUPT3HO75486 399 aa3.26□□□□□ -1.89
LINC01088-203ENST00000507476 SUPT7LO94864 414 aa3.26□□□□□ -1.89
LINC01088-203ENST00000507476 OR2A4O95047 310 aa3.26□□□□□ -1.89
LINC01088-203ENST00000507476 CTSLP07711 333 aa3.26□□□□□ -1.89
LINC01088-203ENST00000507476 SCGB1C2P0DMR2 95 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms