RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 ING4Q9UNL4 249 aa14.97□□□□□ -0.01
NPHP4-210ENST00000506941 FBN1P35555 2871 aaKnown RBP14.97□□□□□ -0.01
NPHP4-210ENST00000506941 IGHV3OR16-10A0A075B7F0 116 aa14.96□□□□□ -0.01
NPHP4-210ENST00000506941 TRBV23-1A0A0A0MS06 115 aa14.96□□□□□ -0.01
NPHP4-210ENST00000506941 A0A1W2PP11 408 aa14.96□□□□□ -0.01
NPHP4-210ENST00000506941 SH2D1BO14796 132 aa14.96□□□□□ -0.01
NPHP4-210ENST00000506941 TOX4O94842 621 aa14.96□□□□□ -0.01
NPHP4-210ENST00000506941 HTR3BO95264 441 aa14.96□□□□□ -0.01
NPHP4-210ENST00000506941 OR3A1P47881 315 aa14.96□□□□□ -0.01
NPHP4-210ENST00000506941 PDCD1Q15116 288 aa14.96□□□□□ -0.01
NPHP4-210ENST00000506941 PIGYQ3MUY2 71 aa14.96□□□□□ -0.01
NPHP4-210ENST00000506941 OR8H2Q8N162 312 aa14.96□□□□□ -0.01
NPHP4-210ENST00000506941 Q8N7P7 452 aa14.96□□□□□ -0.01
NPHP4-210ENST00000506941 OR4M1Q8NGD0 313 aa14.96□□□□□ -0.01
NPHP4-210ENST00000506941 OR51T1Q8NGJ9 327 aa14.96□□□□□ -0.01
NPHP4-210ENST00000506941 SNX22Q96L94 193 aa14.96□□□□□ -0.01
NPHP4-210ENST00000506941 NR1H4Q96RI1 486 aaPredicted RBP14.96□□□□□ -0.01
NPHP4-210ENST00000506941 METTL9Q9H1A3 318 aa14.96□□□□□ -0.01
NPHP4-210ENST00000506941 ZNF581Q9P0T4 197 aa14.96□□□□□ -0.01
NPHP4-210ENST00000506941 MRPS28Q9Y2Q9 187 aaKnown RBP14.96□□□□□ -0.01
NPHP4-210ENST00000506941 ATRQ13535 2644 aa14.96□□□□□ -0.02
NPHP4-210ENST00000506941 TRAV40A0A0B4J280 105 aa14.95□□□□□ -0.02
NPHP4-210ENST00000506941 A0A1W2PQ09 198 aa14.95□□□□□ -0.02
NPHP4-210ENST00000506941 CCRL2O00421 344 aa14.95□□□□□ -0.02
NPHP4-210ENST00000506941 SERPINA2P20848 420 aa14.95□□□□□ -0.02
NPHP4-210ENST00000506941 EPHA1P21709 976 aa14.95□□□□□ -0.02
NPHP4-210ENST00000506941 GABRR1P24046 479 aa14.95□□□□□ -0.02
NPHP4-210ENST00000506941 BMXP51813 675 aa14.95□□□□□ -0.02
NPHP4-210ENST00000506941 DLX1P56177 255 aa14.95□□□□□ -0.02
NPHP4-210ENST00000506941 RPL31P62899 125 aaKnown RBP14.95□□□□□ -0.02
NPHP4-210ENST00000506941 SLC22A6Q4U2R8 563 aa14.95□□□□□ -0.02
NPHP4-210ENST00000506941 METTL11BQ5VVY1 283 aa14.95□□□□□ -0.02
NPHP4-210ENST00000506941 CD200R1LQ6Q8B3 271 aa14.95□□□□□ -0.02
NPHP4-210ENST00000506941 FAM185AQ8N0U4 392 aa14.95□□□□□ -0.02
NPHP4-210ENST00000506941 KIR3DL3Q8N743 410 aa14.95□□□□□ -0.02
NPHP4-210ENST00000506941 OR4S1Q8NGB4 309 aa14.95□□□□□ -0.02
NPHP4-210ENST00000506941 DMRTB1Q96MA1 342 aa14.95□□□□□ -0.02
NPHP4-210ENST00000506941 GFI1Q99684 422 aa14.95□□□□□ -0.02
NPHP4-210ENST00000506941 GLS2Q9UI32 602 aa14.95□□□□□ -0.02
NPHP4-210ENST00000506941 KPTNQ9Y664 436 aa14.95□□□□□ -0.02
NPHP4-210ENST00000506941 MEGF11A6BM72 1044 aa14.94□□□□□ -0.02
NPHP4-210ENST00000506941 SLC33A1O00400 549 aaPredicted RBP14.94□□□□□ -0.02
NPHP4-210ENST00000506941 TNFAIP8O95379 198 aa14.94□□□□□ -0.02
NPHP4-210ENST00000506941 LMO1P25800 156 aa14.94□□□□□ -0.02
NPHP4-210ENST00000506941 CALRP27797 417 aaKnown RBP14.94□□□□□ -0.02
NPHP4-210ENST00000506941 SCN1BQ07699 218 aa14.94□□□□□ -0.02
NPHP4-210ENST00000506941 GRK1Q15835 563 aa14.94□□□□□ -0.02
NPHP4-210ENST00000506941 NEDD8Q15843 81 aa14.94□□□□□ -0.02
NPHP4-210ENST00000506941 TMEM200BQ69YZ2 307 aa14.94□□□□□ -0.02
NPHP4-210ENST00000506941 AWAT2Q6E213 333 aa14.94□□□□□ -0.02
NPHP4-210ENST00000506941 GLIPR1L1Q6UWM5 242 aa14.94□□□□□ -0.02
NPHP4-210ENST00000506941 VMO1Q7Z5L0 202 aa14.94□□□□□ -0.02
NPHP4-210ENST00000506941 UQCC2Q9BRT2 126 aa14.94□□□□□ -0.02
NPHP4-210ENST00000506941 ZNF69Q9UC07 566 aa14.94□□□□□ -0.02
NPHP4-210ENST00000506941 NUP50Q9UKX7 468 aa14.94□□□□□ -0.02
NPHP4-210ENST00000506941 A0A0G2JK05 382 aa14.93□□□□□ -0.02
NPHP4-210ENST00000506941 MEX3AA1L020 520 aaKnown RBP14.93□□□□□ -0.02
NPHP4-210ENST00000506941 ARL6IP5O75915 188 aa14.93□□□□□ -0.02
NPHP4-210ENST00000506941 CD37P11049 281 aa14.93□□□□□ -0.02
NPHP4-210ENST00000506941 ZNF44P15621 663 aa14.93□□□□□ -0.02
NPHP4-210ENST00000506941 EDDM3BP56851 147 aa14.93□□□□□ -0.02
NPHP4-210ENST00000506941 RBM11P57052 281 aaKnown RBP14.93□□□□□ -0.02
NPHP4-210ENST00000506941 PRB3Q04118 309 aaPredicted RBP14.93□□□□□ -0.02
NPHP4-210ENST00000506941 EDDM3AQ14507 147 aa14.93□□□□□ -0.02
NPHP4-210ENST00000506941 ZNF273Q14593 569 aa14.93□□□□□ -0.02
NPHP4-210ENST00000506941 IL13RA2Q14627 380 aa14.93□□□□□ -0.02
NPHP4-210ENST00000506941 NHLRC3Q5JS37 347 aa14.93□□□□□ -0.02
NPHP4-210ENST00000506941 SYT6Q5T7P8 510 aaPredicted RBP14.93□□□□□ -0.02
NPHP4-210ENST00000506941 GDPD3Q7L5L3 318 aa14.93□□□□□ -0.02
NPHP4-210ENST00000506941 TCF23Q7RTU1 214 aa14.93□□□□□ -0.02
NPHP4-210ENST00000506941 OSR2Q8N2R0 312 aa14.93□□□□□ -0.02
NPHP4-210ENST00000506941 TPRX1Q8N7U7 411 aa14.93□□□□□ -0.02
NPHP4-210ENST00000506941 OR5D13Q8NGL4 314 aa14.93□□□□□ -0.02
NPHP4-210ENST00000506941 TBC1D15Q8TC07 691 aa14.93□□□□□ -0.02
NPHP4-210ENST00000506941 C22orf15Q8WYQ4 148 aa14.93□□□□□ -0.02
NPHP4-210ENST00000506941 S100A13Q99584 98 aa14.93□□□□□ -0.02
NPHP4-210ENST00000506941 PPA2Q9H2U2 334 aa14.93□□□□□ -0.02
NPHP4-210ENST00000506941 ST3GAL6Q9Y274 331 aa14.93□□□□□ -0.02
NPHP4-210ENST00000506941 SOX21Q9Y651 276 aaPredicted RBP14.93□□□□□ -0.02
NPHP4-210ENST00000506941 TRAV24A0A0B4J272 114 aa14.92□□□□□ -0.02
NPHP4-210ENST00000506941 CENPVL3A0A0U1RRI6 287 aa14.92□□□□□ -0.02
NPHP4-210ENST00000506941 TRDV1A0A1B0GX56 115 aa14.92□□□□□ -0.02
NPHP4-210ENST00000506941 SHISA3A0PJX4 238 aa14.92□□□□□ -0.02
NPHP4-210ENST00000506941 M0R1W7 72 aa14.92□□□□□ -0.02
NPHP4-210ENST00000506941 DEGS1O15121 323 aa14.92□□□□□ -0.02
NPHP4-210ENST00000506941 CSTBP04080 98 aaKnown RBP14.92□□□□□ -0.02
NPHP4-210ENST00000506941 CCL3L1P16619 93 aa14.92□□□□□ -0.02
NPHP4-210ENST00000506941 TUSC1Q2TAM9 212 aa14.92□□□□□ -0.02
NPHP4-210ENST00000506941 C1orf100Q5SVJ3 147 aa14.92□□□□□ -0.02
NPHP4-210ENST00000506941 CMTM4Q8IZR5 234 aa14.92□□□□□ -0.02
NPHP4-210ENST00000506941 BCL6BQ8N143 479 aaPredicted RBP14.92□□□□□ -0.02
NPHP4-210ENST00000506941 CHST4Q8NCG5 386 aa14.92□□□□□ -0.02
NPHP4-210ENST00000506941 TMEM104Q8NE00 496 aa14.92□□□□□ -0.02
NPHP4-210ENST00000506941 TSPAN14Q8NG11 270 aa14.92□□□□□ -0.02
NPHP4-210ENST00000506941 SLC6A7Q99884 636 aa14.92□□□□□ -0.02
NPHP4-210ENST00000506941 SLITRK2Q9H156 845 aa14.92□□□□□ -0.02
NPHP4-210ENST00000506941 ZNF696Q9H7X3 374 aa14.92□□□□□ -0.02
NPHP4-210ENST00000506941 SIRT7Q9NRC8 400 aa14.92□□□□□ -0.02
NPHP4-210ENST00000506941 MGST3O14880 152 aa14.91□□□□□ -0.02
NPHP4-210ENST00000506941 GEMIN2O14893 280 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms