RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 PSPNO60542 156 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 ARL6IP5O75915 188 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 HTR3BO95264 441 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 ECDO95905 644 aaPredicted RBP4.72□□□□□ -1.65
USP46-206ENST00000506707 HAND1O96004 215 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 TK1P04183 234 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 TFAP2AP05549 437 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 CHRM2P08172 466 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 SMIM18P0DKX4 95 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 CD36P16671 472 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 PRKACAP17612 351 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 GATA3P23771 443 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 CALRP27797 417 aaKnown RBP4.72□□□□□ -1.65
USP46-206ENST00000506707 MTNR1BP49286 362 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 FGF12P61328 243 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 QRFPP83859 136 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 COL10A1Q03692 680 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 PDCD1Q15116 288 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 RSU1Q15404 277 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 CR1LQ2VPA4 569 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 C11orf91Q3C1V1 193 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 LRRC10Q5BKY1 277 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 SPIN3Q5JUX0 258 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 FAM120AOSQ5T036 256 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 DCAF12L2Q5VW00 463 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 CD276Q5ZPR3 534 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 GLT8D1Q68CQ7 371 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 C22orf42Q6IC83 251 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 Q6P435 159 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 GLIPR1L1Q6UWM5 242 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 GLCCI1Q86VQ1 547 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 NR2C2APQ86WQ0 139 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 OSR2Q8N2R0 312 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 JAGN1Q8N5M9 183 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 NKAIN3Q8N8D7 197 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 PNLDC1Q8NA58 520 aaKnown RBP4.72□□□□□ -1.65
USP46-206ENST00000506707 TBC1D15Q8TC07 691 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 SLC25A28Q96A46 364 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 FOXRED1Q96CU9 486 aaPredicted RBP4.72□□□□□ -1.65
USP46-206ENST00000506707 YIPF6Q96EC8 236 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 CPNE2Q96FN4 548 aaPredicted RBP4.72□□□□□ -1.65
USP46-206ENST00000506707 NUDT16L1Q9BRJ7 211 aaKnown RBP4.72□□□□□ -1.65
USP46-206ENST00000506707 DCTN5Q9BTE1 182 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 KRTAP4-5Q9BYR2 181 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 METTL9Q9H1A3 318 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 ZNF581Q9P0T4 197 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 SLC25A10Q9UBX3 287 aaPredicted RBP4.72□□□□□ -1.65
USP46-206ENST00000506707 OR14J1Q9UGF5 321 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 OPN4Q9UHM6 478 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 RPUSD1Q9UJJ7 312 aaKnown RBP4.72□□□□□ -1.65
USP46-206ENST00000506707 KCNS2Q9ULS6 477 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 STUB1Q9UNE7 303 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 GSTK1Q9Y2Q3 226 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 AK6Q9Y3D8 172 aaKnown RBP4.72□□□□□ -1.65
USP46-206ENST00000506707 TANC2Q9HCD6 1990 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 CR1P17927 2039 aa4.72□□□□□ -1.65
USP46-206ENST00000506707 TRAV24A0A0B4J272 114 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 A0A0G2JMP0 313 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 A0A0X1KG70 313 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 NKX6-3A6NJ46 265 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 J3QLI3 93 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 DEGS1O15121 323 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 ZNF780AO75290 641 aaPredicted RBP4.71□□□□□ -1.66
USP46-206ENST00000506707 CRLF1O75462 422 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 OR2H2O95918 312 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 CSTBP04080 98 aaKnown RBP4.71□□□□□ -1.66
USP46-206ENST00000506707 LIPFP07098 398 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 PPIAL4GP0DN37 164 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 GTF2F2P13984 249 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 MMP9P14780 707 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 NDUFB7P17568 137 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 GADD45AP24522 165 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 ALDH3B2P48448 385 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 PSMD7P51665 324 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 BMXP51813 675 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 SNU13P55769 128 aaKnown RBP4.71□□□□□ -1.66
USP46-206ENST00000506707 OR10A3P58181 314 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 SCN1BQ07699 218 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 GPR176Q14439 515 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 PIGYQ3MUY2 71 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 SLC22A6Q4U2R8 563 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 NHLRC3Q5JS37 347 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 TMEM200BQ69YZ2 307 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 METAP1DQ6UB28 335 aaPredicted RBP4.71□□□□□ -1.66
USP46-206ENST00000506707 C11orf42Q8N5U0 333 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 TMEM104Q8NE00 496 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 TMEM185AQ8NFB2 350 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 OR4S1Q8NGB4 309 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 OR4M2Q8NGB6 313 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 OR5D13Q8NGL4 314 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 C8orf46Q8TAG6 207 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 ST8SIA4Q92187 359 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 MRPS24Q96EL2 167 aaKnown RBP4.71□□□□□ -1.66
USP46-206ENST00000506707 SNX22Q96L94 193 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 DMRTB1Q96MA1 342 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 S100A13Q99584 98 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 CHCHD6Q9BRQ6 235 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 CENPOQ9BU64 300 aa4.71□□□□□ -1.66
USP46-206ENST00000506707 FAM192AQ9GZU8 254 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms