RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 VCANP13611 3396 aa14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 GEMIN2O14893 280 aaKnown RBP14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 IL18BPO95998 194 aa14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 IGHG1P01857 330 aa14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 OMGP23515 440 aa14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 CTSSP25774 331 aa14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 HOXA6P31267 233 aa14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 TLE4Q04727 773 aa14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 SMAD4Q13485 552 aaKnown RBP14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 C1orf61Q13536 156 aa14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 KCNMB1Q16558 191 aa14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 DPPA3Q6W0C5 159 aa14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 DTX1Q86Y01 620 aa14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 OR1N1Q8NGS0 311 aa14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 COPS7AQ9UBW8 275 aa14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 DOCK8Q8NF50 2099 aa14.86□□□□□ -0.03
SQSTM1-211ENST00000506690 TDRD6O60522 2096 aaKnown RBP14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 NKX2-6A6NCS4 301 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 C2orf72A6NCS6 295 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 DHRS3O75911 302 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 FAHP16930 419 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 EPHA1P21709 976 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 NKX2-1P43699 371 aaPredicted RBP14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 UCP3P55916 312 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 ZFP36L1Q07352 338 aaKnown RBP14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 CDCP2Q5VXM1 449 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 ODF3L1Q8IXM7 274 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 PGAM5Q96HS1 289 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 MRGPRX1Q96LB2 322 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 TP53RKQ96S44 253 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 PPP1R14DQ9NXH3 145 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 HS3ST3A1Q9Y663 406 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 THADAQ6YHU6 1953 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 TRAV1-1A0A0B4J248 108 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 H3BML4 177 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 KLF8O95600 359 aaPredicted RBP14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 ONECUT2O95948 504 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 CTSEP14091 401 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 PNLIPP16233 465 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 CAPZBP47756 277 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 CASP6P55212 293 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 PARM1Q6UWI2 310 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 OR4X1Q8NH49 305 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 PIGTQ969N2 578 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 MOB3AQ96BX8 217 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 DDA1Q9BW61 102 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 VDAC3Q9Y277 283 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 REV3LO60673 3130 aa14.85□□□□□ -0.03
SQSTM1-211ENST00000506690 B4DGG1 531 aa14.84□□□□□ -0.03
SQSTM1-211ENST00000506690 OPN1MWP04001 364 aa14.84□□□□□ -0.03
SQSTM1-211ENST00000506690 OPN1MW2P0DN77 364 aa14.84□□□□□ -0.03
SQSTM1-211ENST00000506690 OPN1MW3P0DN78 364 aa14.84□□□□□ -0.03
SQSTM1-211ENST00000506690 RUNX1Q01196 453 aa14.84□□□□□ -0.03
SQSTM1-211ENST00000506690 P4HA3Q7Z4N8 544 aa14.84□□□□□ -0.03
SQSTM1-211ENST00000506690 CPEB2Q7Z5Q1 589 aaKnown RBP14.84□□□□□ -0.03
SQSTM1-211ENST00000506690 UEVLDQ8IX04 471 aa14.84□□□□□ -0.03
SQSTM1-211ENST00000506690 CMTM1Q8IZ96 169 aa14.84□□□□□ -0.03
SQSTM1-211ENST00000506690 RPP25Q9BUL9 199 aaKnown RBP14.84□□□□□ -0.03
SQSTM1-211ENST00000506690 ZNF581Q9P0T4 197 aa14.84□□□□□ -0.03
SQSTM1-211ENST00000506690 A0A0U1RQV5 110 aa14.84□□□□□ -0.03
SQSTM1-211ENST00000506690 EREGO14944 169 aa14.84□□□□□ -0.03
SQSTM1-211ENST00000506690 SEC16AO15027 2179 aa14.84□□□□□ -0.03
SQSTM1-211ENST00000506690 FOSL2P15408 326 aa14.84□□□□□ -0.03
SQSTM1-211ENST00000506690 DYNLT3P51808 116 aa14.84□□□□□ -0.03
SQSTM1-211ENST00000506690 HYAL1Q12794 435 aa14.84□□□□□ -0.03
SQSTM1-211ENST00000506690 COA6Q5JTJ3 125 aaKnown RBP14.84□□□□□ -0.03
SQSTM1-211ENST00000506690 MEX3BQ6ZN04 569 aaKnown RBP14.84□□□□□ -0.03
SQSTM1-211ENST00000506690 CCDC71LQ8N9Z2 235 aa14.84□□□□□ -0.03
SQSTM1-211ENST00000506690 DNASE2BQ8WZ79 361 aa14.84□□□□□ -0.03
SQSTM1-211ENST00000506690 POM121Q96HA1 1249 aa14.84□□□□□ -0.03
SQSTM1-211ENST00000506690 CABLES2Q9BTV7 478 aa14.84□□□□□ -0.03
SQSTM1-211ENST00000506690 SOHLH2Q9NX45 425 aa14.84□□□□□ -0.03
SQSTM1-211ENST00000506690 OR14J1Q9UGF5 321 aa14.84□□□□□ -0.03
SQSTM1-211ENST00000506690 VSTM2BA6NLU5 285 aa14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 TRDCB7Z8K6 153 aa14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 EFNA2O43921 213 aa14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 COX5BP10606 129 aa14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 APLNRP35414 380 aa14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 RAB11AP62491 216 aa14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 RELQ04864 619 aaPredicted RBP14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 SLC10A1Q14973 349 aa14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 NSDHLQ15738 373 aa14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 Q6ZSR3 168 aa14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 ZNF100Q8IYN0 542 aa14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 OR1P1Q8NH06 330 aa14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 SDF2L1Q9HCN8 221 aa14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 SHANK1Q9Y566 2161 aa14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 NCOA6Q14686 2063 aaPredicted RBP14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 KNL1Q8NG31 2342 aa14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 IGHV5-51A0A0C4DH38 117 aa14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 TRAF3IP2O43734 574 aaPredicted RBP14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 SSSCA1O60232 199 aa14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 CYTIPO60759 359 aa14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 GCGP01275 180 aa14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 TNFRSF9Q07011 255 aa14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 C17orf67Q0P5P2 114 aa14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 SUMF1Q8NBK3 374 aa14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 OR10A7Q8NGE5 316 aa14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 ABHD14BQ96IU4 210 aa14.83□□□□□ -0.04
SQSTM1-211ENST00000506690 CISD1Q9NZ45 108 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms