RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 STARD4Q96DR4 205 aa3.68□□□□□ -1.82
HERC4-213ENST00000506515 ZMYND19Q96E35 227 aaPredicted RBP3.68□□□□□ -1.82
HERC4-213ENST00000506515 ZFP3Q96NJ6 502 aa3.68□□□□□ -1.82
HERC4-213ENST00000506515 RNF157Q96PX1 679 aa3.68□□□□□ -1.82
HERC4-213ENST00000506515 PCBD2Q9H0N5 130 aa3.68□□□□□ -1.82
HERC4-213ENST00000506515 EXO5Q9H790 373 aa3.68□□□□□ -1.82
HERC4-213ENST00000506515 UVRAGQ9P2Y5 699 aa3.68□□□□□ -1.82
HERC4-213ENST00000506515 CTSFQ9UBX1 484 aa3.68□□□□□ -1.82
HERC4-213ENST00000506515 LGALS13Q9UHV8 139 aa3.68□□□□□ -1.82
HERC4-213ENST00000506515 HEY1Q9Y5J3 304 aa3.68□□□□□ -1.82
HERC4-213ENST00000506515 TET2Q6N021 2002 aaPredicted RBP3.68□□□□□ -1.82
HERC4-213ENST00000506515 CPAMD8Q8IZJ3 1885 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 KCNE1BA0A087WTH5 132 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 IGHV3-66A0A0C4DH42 116 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 PSMD12O00232 456 aaPredicted RBP3.67□□□□□ -1.82
HERC4-213ENST00000506515 NUPL2O15504 423 aaKnown RBP3.67□□□□□ -1.82
HERC4-213ENST00000506515 ENTPD5O75356 428 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 NSA2O95478 260 aaKnown RBP3.67□□□□□ -1.82
HERC4-213ENST00000506515 EPPINO95925 133 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 PIRTP0C851 137 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 ZNF823P16415 610 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 KDELR1P24390 212 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 OTX1P32242 354 aaPredicted RBP3.67□□□□□ -1.82
HERC4-213ENST00000506515 RPA3P35244 121 aaPredicted RBP3.67□□□□□ -1.82
HERC4-213ENST00000506515 CX3CR1P49238 355 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 MNAT1P51948 309 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 RND2P52198 227 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 OR4D2P58180 307 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 EIF3EP60228 445 aaKnown RBP3.67□□□□□ -1.82
HERC4-213ENST00000506515 PRDX1Q06830 199 aaKnown RBP3.67□□□□□ -1.82
HERC4-213ENST00000506515 DEFB110Q30KQ9 67 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 C1orf185Q5T7R7 199 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 NCBP2-AS2Q69YL0 99 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 LUZP2Q86TE4 346 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 LINC00523Q86TU6 105 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 LRRC6Q86X45 466 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 CYP4Z2PQ8N1L4 340 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 FAM86B1Q8N7N1 296 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 CYB561D1Q8N8Q1 229 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 OR4K2Q8NGD2 314 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 OR5AR1Q8NGP9 310 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 OR10J6PQ8NGY7 276 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 OR51Q1Q8NH59 317 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 SGMS2Q8NHU3 365 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 PEX13Q92968 403 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 PEBP4Q96S96 227 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 SLC25A2Q9BXI2 301 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 XKR8Q9H6D3 395 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 GEMIN7Q9H840 131 aaKnown RBP3.67□□□□□ -1.82
HERC4-213ENST00000506515 PLEKHF2Q9H8W4 249 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 PATZ1Q9HBE1 687 aaKnown RBP3.67□□□□□ -1.82
HERC4-213ENST00000506515 ANKHQ9HCJ1 492 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 MRPS30Q9NP92 439 aaKnown RBP3.67□□□□□ -1.82
HERC4-213ENST00000506515 ISYNA1Q9NPH2 558 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.67□□□□□ -1.82
HERC4-213ENST00000506515 TMED5Q9Y3A6 229 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 ZNF407Q9C0G0 2248 aa3.67□□□□□ -1.82
HERC4-213ENST00000506515 TRGV5A0A0B4J1U4 118 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 IGHV3-74A0A0B4J1X5 117 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 SLC5A10A0PJK1 596 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 H0YGG7 62 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 MFSD11O43934 449 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 IGKV3-11P04433 115 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 OR5H8P0DN80 308 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 MYL2P10916 166 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 GPX4P36969 197 aaPredicted RBP3.66□□□□□ -1.82
HERC4-213ENST00000506515 CSNK1A1P48729 337 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 TTPAP49638 278 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 ZNF138P52744 262 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 MLF1P58340 268 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 STXBP1P61764 594 aaKnown RBP3.66□□□□□ -1.82
HERC4-213ENST00000506515 RPS15AP62244 130 aaKnown RBP3.66□□□□□ -1.82
HERC4-213ENST00000506515 RAP1AP62834 184 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 LIPEQ05469 1076 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 MERTKQ12866 999 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 ERCC8Q13216 396 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 SLAQ13239 276 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 RCAN2Q14206 197 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 RGNQ15493 299 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 ZNF691Q5VV52 312 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 OPN5Q6U736 354 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 MBOAT1Q6ZNC8 495 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 EIF3MQ7L2H7 374 aaKnown RBP3.66□□□□□ -1.82
HERC4-213ENST00000506515 SSX8Q7RTT4 187 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 SKA2Q8WVK7 121 aaPredicted RBP3.66□□□□□ -1.82
HERC4-213ENST00000506515 NRGNQ92686 78 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 NAP1L5Q96NT1 182 aaPredicted RBP3.66□□□□□ -1.82
HERC4-213ENST00000506515 OR2A5Q96R48 311 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 SMR3AQ99954 134 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 CHAC1Q9BUX1 264 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 BEX2Q9BXY8 128 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 BOKQ9UMX3 212 aaPredicted RBP3.66□□□□□ -1.82
HERC4-213ENST00000506515 SLC22A7Q9Y694 548 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 ABCA1O95477 2261 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 DSCAMO60469 2012 aa3.66□□□□□ -1.82
HERC4-213ENST00000506515 NDUFAB1O14561 156 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 CHST1O43916 411 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 FKBP6O75344 327 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 MED6O75586 246 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 PROSCO94903 275 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms