RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 DUSP1P28562 367 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 CEBPDP49716 269 aaPredicted RBP8.73□□□□□ -1.01
TPM3-217ENST00000504663 SNU13P55769 128 aaKnown RBP8.73□□□□□ -1.01
TPM3-217ENST00000504663 SSBP1Q04837 148 aaKnown RBP8.73□□□□□ -1.01
TPM3-217ENST00000504663 SCN1BQ07699 218 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 FAM189A2Q15884 450 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 RGS21Q2M5E4 152 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 FAM209AQ5JX71 171 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 TRIQKQ629K1 86 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 MEX3BQ6ZN04 569 aaKnown RBP8.73□□□□□ -1.01
TPM3-217ENST00000504663 NRARPQ7Z6K4 114 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 LINC00596Q86U02 117 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 GLCCI1Q86VQ1 547 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 Q8IYB0 196 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 GAPTQ8N292 157 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 MUC15Q8N387 334 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 GVQW1Q8N7I0 195 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 POC5Q8NA72 575 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 CHST4Q8NCG5 386 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 OR4D10Q8NGI6 311 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 LRRC29Q8WV35 223 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 FCAMRQ8WWV6 532 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 FBXW5Q969U6 566 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 NEDD4LQ96PU5 975 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 DIRC2Q96SL1 478 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 PGPEP1Q9NXJ5 209 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 NKIRAS2Q9NYR9 191 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 CACNG2Q9Y698 323 aa8.73□□□□□ -1.01
TPM3-217ENST00000504663 A6NLC8 198 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 SERPINE3A8MV23 424 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 PRSS44E7EML9 344 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 SLC33A1O00400 549 aaPredicted RBP8.72□□□□□ -1.01
TPM3-217ENST00000504663 HS3ST1O14792 307 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 LYRM1O43325 122 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 FCN3O75636 299 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 OR7C1O76099 320 aaPredicted RBP8.72□□□□□ -1.01
TPM3-217ENST00000504663 OR2H2O95918 312 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 NAPSAO96009 420 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 CYB5AP00167 134 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 HPXP02790 462 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 ZNF735P0CB33 412 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 FUT3P21217 361 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 LMO1P25800 156 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 PPOXP50336 477 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 SELENOVP59797 346 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 MZT1Q08AG7 82 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 DYRK1AQ13627 763 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 TESK1Q15569 626 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 C4orf46Q504U0 113 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 PLA1AQ53H76 456 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 NKAPLQ5M9Q1 402 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 FAM201AQ5SY85 155 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 TRAPPC6BQ86SZ2 158 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 CD177Q8N6Q3 437 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 PLPPR1Q8TBJ4 325 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 FAAP24Q9BTP7 215 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 TRAF4Q9BUZ4 470 aaPredicted RBP8.72□□□□□ -1.01
TPM3-217ENST00000504663 SEBOXQ9HB31 216 aaPredicted RBP8.72□□□□□ -1.01
TPM3-217ENST00000504663 HRASLSQ9HDD0 168 aa8.72□□□□□ -1.01
TPM3-217ENST00000504663 ZNF107Q9UII5 783 aaPredicted RBP8.72□□□□□ -1.01
TPM3-217ENST00000504663 LRBAP50851 2863 aa8.71□□□□□ -1.01
TPM3-217ENST00000504663 IGKV1D-17A0A075B6S4 117 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 LINC00854A0A1B0GVQ3 168 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 TMEM82A0PJX8 343 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 TNFRSF13BO14836 293 aaPredicted RBP8.71□□□□□ -1.02
TPM3-217ENST00000504663 PSPNO60542 156 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 ZNF737O75373 536 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 NXPH2O95156 264 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 KNG1P01042 644 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 SLC6A1P30531 599 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 CD80P33681 288 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 CCL8P80075 99 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 IKZF1Q13422 519 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 SPIN3Q5JUX0 258 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 SHEQ5VZ18 495 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 TEX36Q5VZQ5 186 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 STUMQ69YW2 141 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 OR52W1Q6IF63 320 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 FAAP20Q6NZ36 180 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 ZNF880Q6PDB4 577 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 C20orf204Q6ZNR8 217 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 HOGA1Q86XE5 327 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 TOMM5Q8N4H5 51 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 TMEM229BQ8NBD8 167 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 SUMF2Q8NBJ7 301 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 OR4S1Q8NGB4 309 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 OR4C16Q8NGL9 310 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 ERGIC1Q969X5 290 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 MRGPRFQ96AM1 343 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 FN3KRPQ9HA64 309 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 PCDHB16Q9NRJ7 776 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 DSCAML1Q8TD84 2053 aa8.71□□□□□ -1.02
TPM3-217ENST00000504663 SPTAN1Q13813 2472 aaKnown RBP8.71□□□□□ -1.02
TPM3-217ENST00000504663 FBN2P35556 2912 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 TRBV6-6A0A0A6YYG2 114 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 A0A0B4J293 547 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 A0A1B0GW55 424 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 UBE2QL1A1L167 161 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 SIRPB1O00241 398 aa8.7□□□□□ -1.02
TPM3-217ENST00000504663 FBXO24O75426 580 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms