RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 SNRNP35Q16560 246 aaKnown RBP4.14□□□□□ -1.75
NIPBL-204ENST00000504430 ATP6AP1LQ52LC2 224 aa4.14□□□□□ -1.75
NIPBL-204ENST00000504430 RSBN1Q5VWQ0 802 aaPredicted RBP4.14□□□□□ -1.75
NIPBL-204ENST00000504430 SAMD12Q8N8I0 201 aa4.14□□□□□ -1.75
NIPBL-204ENST00000504430 NABP1Q96AH0 204 aa4.14□□□□□ -1.75
NIPBL-204ENST00000504430 PIK3IP1Q96FE7 263 aa4.14□□□□□ -1.75
NIPBL-204ENST00000504430 ISG20L2Q9H9L3 353 aaKnown RBP4.14□□□□□ -1.75
NIPBL-204ENST00000504430 PRNDQ9UKY0 176 aa4.14□□□□□ -1.75
NIPBL-204ENST00000504430 TRAV8-4A0A0B4J246 113 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 ARL6IP5O75915 188 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 YIF1AO95070 293 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 IL3P08700 152 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 IGHV4-38-2P0DP08 117 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 OR1E2P47887 323 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 TBPL1P62380 186 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 C11orf72Q8NBR9 251 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 TPT1P8Q9HAU6 139 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 EDA2RQ9HAV5 297 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 NIT2Q9NQR4 276 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 CALYQ9NYX4 217 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 RBM12B-AS1Q9P1G2 102 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 POU2F3Q9UKI9 436 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 SPEF2Q9C093 1822 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 GMNCA6NCL1 334 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 TNFSF12O43508 249 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 NUDT14O95848 222 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 SMIM6P0DI80 62 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 CPMP14384 443 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 TCN2P20062 427 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 CTBP2P56545 445 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 RIPPLY3P57055 190 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 HIST3H3Q16695 136 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 OR52E4Q8NGH9 312 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 OR10G4Q8NGN3 311 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 ZNRF2Q8NHG8 242 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 NEIL3Q8TAT5 605 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 GPR119Q8TDV5 335 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 CCDC115Q96NT0 180 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 SPRR3Q9UBC9 169 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 RAB22AQ9UL26 194 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 MYRFQ9Y2G1 1151 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 RNF114Q9Y508 228 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 V9GY05 133 aa4.13□□□□□ -1.75
NIPBL-204ENST00000504430 CHD2O14647 1828 aaKnown RBP4.13□□□□□ -1.75
NIPBL-204ENST00000504430 IGHV3-20A0A0C4DH32 117 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 A0A1W2PRG6 482 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 CCSMST1Q4G0I0 132 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 ELP2Q6IA86 826 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 NANOGP8Q6NSW7 305 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 CBR4Q8N4T8 237 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 DNAJC30Q96LL9 226 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 C9orf85Q96MD7 179 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 LINC01587Q99440 93 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 TMPRSS5Q9H3S3 457 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 NANOGQ9H9S0 305 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 RBM22Q9NW64 420 aaKnown RBP eCLIP4.12□□□□□ -1.75
NIPBL-204ENST00000504430 USP6P35125 1406 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 RGS5O15539 181 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 ALPLP05186 524 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 ATP5G1P05496 136 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 MUC1P15941 1255 aaPredicted RBP4.12□□□□□ -1.75
NIPBL-204ENST00000504430 CD34P28906 385 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 RPL29P47914 159 aaKnown RBP4.12□□□□□ -1.75
NIPBL-204ENST00000504430 CDC42P60953 191 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 SRSF4Q08170 494 aaKnown RBP4.12□□□□□ -1.75
NIPBL-204ENST00000504430 RGNQ15493 299 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 TCTEX1D4Q5JR98 221 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 UBE2UQ5VVX9 321 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 DGAT2L6Q6ZPD8 337 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 Q6ZRP5 223 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 CYGBQ8WWM9 190 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 GALMQ96C23 342 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 SUCNR1Q9BXA5 334 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 ZNF331Q9NQX6 463 aaPredicted RBP4.12□□□□□ -1.75
NIPBL-204ENST00000504430 PIK3C2GO75747 1445 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 CLDN25C9JDP6 229 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 E9PLD3 99 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 C6orf47O95873 294 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 IGLV2-14P01704 120 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 CELA2AP08217 269 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 CA5AP35218 305 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 FAM162BQ5T6X4 162 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 LCN12Q6JVE5 192 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 FAM183BPQ6ZVS7 135 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 DOCK6Q96HP0 2047 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 FCRL1Q96LA6 429 aa4.12□□□□□ -1.75
NIPBL-204ENST00000504430 MEIKINA0A087WXM9 373 aa4.11□□□□□ -1.75
NIPBL-204ENST00000504430 IGHV1OR21-1A0A087WYE8 117 aa4.11□□□□□ -1.75
NIPBL-204ENST00000504430 MSGN1A6NI15 193 aa4.11□□□□□ -1.75
NIPBL-204ENST00000504430 REM1O75628 298 aa4.11□□□□□ -1.75
NIPBL-204ENST00000504430 SULT1C4O75897 302 aa4.11□□□□□ -1.75
NIPBL-204ENST00000504430 THY1P04216 161 aa4.11□□□□□ -1.75
NIPBL-204ENST00000504430 OR8U8P0C7N1 319 aa4.11□□□□□ -1.75
NIPBL-204ENST00000504430 EMX1Q04741 257 aaPredicted RBP4.11□□□□□ -1.75
NIPBL-204ENST00000504430 OR8G1Q15617 311 aa4.11□□□□□ -1.75
NIPBL-204ENST00000504430 OR4D11Q8NGI4 311 aa4.11□□□□□ -1.75
NIPBL-204ENST00000504430 OR13A1Q8NGR1 328 aa4.11□□□□□ -1.75
NIPBL-204ENST00000504430 OR2K2Q8NGT1 345 aa4.11□□□□□ -1.75
NIPBL-204ENST00000504430 PRSS3P2Q8NHM4 247 aa4.11□□□□□ -1.75
NIPBL-204ENST00000504430 FAM151AQ8WW52 585 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms