RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 SNX22Q96L94 193 aa11.34□□□□□ -0.59
PDLIM7-211ENST00000504318 CCDC90BQ9GZT6 254 aa11.34□□□□□ -0.59
PDLIM7-211ENST00000504318 ERVK13-1Q9NX77 482 aa11.34□□□□□ -0.59
PDLIM7-211ENST00000504318 RPL36Q9Y3U8 105 aaKnown RBP11.34□□□□□ -0.59
PDLIM7-211ENST00000504318 PRKDCP78527 4128 aaKnown RBP11.34□□□□□ -0.59
PDLIM7-211ENST00000504318 VGLL3A8MV65 326 aa11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 H3BUX3 64 aa11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 J3QLW9 94 aa11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 ZNF701M0R085 212 aaPredicted RBP11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 CHST1O43916 411 aa11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 NOL3O60936 208 aaKnown RBP11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 ALX3O95076 343 aa11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 HAND1O96004 215 aa11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 HTR1AP08908 422 aa11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 LIMS3P0CW19 117 aa11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 LIMS4P0CW20 117 aa11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 ZNF19P17023 458 aa11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 OR3A1P47881 315 aa11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 ZP1P60852 638 aa11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 PDZK1IP1Q13113 114 aa11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 NEDD8Q15843 81 aa11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 ZNF529Q6P280 563 aa11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 ZNF782Q6ZMW2 699 aaPredicted RBP11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 AHSA2Q719I0 299 aa11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 LHFPL3Q86UP9 236 aa11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 OR4S1Q8NGB4 309 aa11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 RGP1Q92546 391 aaPredicted RBP11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 SPSB1Q96BD6 273 aa11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 OPALINQ96PE5 141 aa11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 SSX3Q99909 188 aa11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 ALG8Q9BVK2 526 aa11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 JAM3Q9BX67 310 aa11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 AMBNQ9NP70 447 aa11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 FKBP14Q9NWM8 211 aa11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 PAK1IP1Q9NWT1 392 aaPredicted RBP11.33□□□□□ -0.6
PDLIM7-211ENST00000504318 MEX3AA1L020 520 aaKnown RBP11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 CCDC160A6NGH7 325 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 KDM4BO94953 1096 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 INMTO95050 263 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 ZFPL1O95159 310 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 CDK1P06493 297 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 ZNF728P0DKX0 622 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 IGHV1-8P0DP01 117 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 LMO1P25800 156 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 DUSP1P28562 367 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 TGFBR2P37173 567 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 ATP1B3P54709 279 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 ACTA2P62736 377 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 ACTG2P63267 376 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 RAB40BQ12829 278 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 SMN1Q16637 294 aaKnown RBP11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 LRRC75BQ2VPJ9 315 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 ZNF626Q68DY1 528 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 DHRS7BQ6IAN0 325 aaPredicted RBP11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 SLC35E4Q6ICL7 350 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 CCBE1Q6UXH8 406 aaPredicted RBP11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 LHFPL2Q6ZUX7 228 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 Q8IYB0 196 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 FAM58AQ8N1B3 248 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 STX19Q8N4C7 294 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 TPRX1Q8N7U7 411 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 ASCC1Q8N9N2 400 aaKnown RBP11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 OR11H6Q8NGC7 330 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 OR52I1Q8NGK6 324 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 EMG1Q92979 244 aaKnown RBP11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 SPACA5Q96QH8 159 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 COMMD4Q9H0A8 199 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 HEXA-AS1Q9H8Q6 139 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 HMG20AQ9NP66 347 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 FBLN5Q9UBX5 448 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 HHLA2Q9UM44 414 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 NOTCH1P46531 2555 aa11.32□□□□□ -0.6
PDLIM7-211ENST00000504318 MMP23AO75900 390 aa11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 PAHP00439 452 aa11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 SERPINA3P01011 423 aa11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 CALCBP10092 127 aa11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 PRKACBP22694 351 aa11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 COX7A1P24310 79 aa11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 ERP29P30040 261 aaKnown RBP11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 POU3F4P49335 361 aa11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 EFNB2P52799 333 aa11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 MTCP1P56278 107 aa11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 MEF2CQ06413 473 aaPredicted RBP11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 TBCEQ15813 527 aaPredicted RBP11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 SPIN3Q5JUX0 258 aa11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 FOXB2Q5VYV0 432 aa11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 XAF1Q6GPH4 301 aa11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 Q6P435 159 aa11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 BRICD5Q6PL45 260 aa11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 PARP16Q8N5Y8 322 aa11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 OR13C9Q8NGT0 318 aa11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 GGHQ92820 318 aa11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 MUL1Q969V5 352 aa11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 RFT1Q96AA3 541 aa11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 CHST6Q9GZX3 395 aa11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 RBM38Q9H0Z9 239 aaKnown RBP11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 INPP5EQ9NRR6 644 aa11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 LINC00312Q9Y6C7 94 aa11.31□□□□□ -0.6
PDLIM7-211ENST00000504318 A0A1W2PPH5 198 aa11.3□□□□□ -0.6
PDLIM7-211ENST00000504318 CDK5R1Q15078 307 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms