RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 CST6Q15828 149 aa0.94□□□□□ -2.26
SMC4-227ENST00000497984 TNXAQ16473 311 aa0.94□□□□□ -2.26
SMC4-227ENST00000497984 BCL2A1Q16548 175 aa0.94□□□□□ -2.26
SMC4-227ENST00000497984 NDUFAF6Q330K2 333 aa0.94□□□□□ -2.26
SMC4-227ENST00000497984 TTMPQ5BVD1 217 aa0.94□□□□□ -2.26
SMC4-227ENST00000497984 DUPD1Q68J44 220 aa0.94□□□□□ -2.26
SMC4-227ENST00000497984 LINC00596Q86U02 117 aa0.94□□□□□ -2.26
SMC4-227ENST00000497984 HS3ST5Q8IZT8 346 aa0.94□□□□□ -2.26
SMC4-227ENST00000497984 CNPY4Q8N129 248 aa0.94□□□□□ -2.26
SMC4-227ENST00000497984 OR5T3Q8NGG3 340 aa0.94□□□□□ -2.26
SMC4-227ENST00000497984 C2orf15Q8WU43 125 aaKnown RBP0.94□□□□□ -2.26
SMC4-227ENST00000497984 CENPNQ96H22 339 aaPredicted RBP0.94□□□□□ -2.26
SMC4-227ENST00000497984 RILPQ96NA2 401 aa0.94□□□□□ -2.26
SMC4-227ENST00000497984 YPEL4Q96NS1 127 aa0.94□□□□□ -2.26
SMC4-227ENST00000497984 ANP32EQ9BTT0 268 aa0.94□□□□□ -2.26
SMC4-227ENST00000497984 LRRC19Q9H756 370 aa0.94□□□□□ -2.26
SMC4-227ENST00000497984 DDX18Q9NVP1 670 aaKnown RBP0.94□□□□□ -2.26
SMC4-227ENST00000497984 PSME2Q9UL46 239 aa0.94□□□□□ -2.26
SMC4-227ENST00000497984 U3KQK5 164 aa0.94□□□□□ -2.26
SMC4-227ENST00000497984 KMT2EQ8IZD2 1858 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 ANKRD20A5PA0PJZ0 165 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 OR2AT4A6NND4 320 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 GYG2O15488 501 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 COX7A2P2O60397 106 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 GMDSO60547 372 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 ALOX12BO75342 701 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 ETHE1O95571 254 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 RLN2P04090 185 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 TPM2P07951 284 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 LIPCP11150 499 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 TAS2R60P59551 318 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 PSMC5P62195 406 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 TAL2Q16559 108 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 CLEC12AQ5QGZ9 265 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 NELFCDQ8IXH7 590 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 GAPTQ8N292 157 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 OR51L1Q8NGJ5 315 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 RNASE11Q8TAA1 199 aaKnown RBP0.93□□□□□ -2.26
SMC4-227ENST00000497984 C22orf15Q8WYQ4 148 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 MAL2Q969L2 176 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 QKIQ96PU8 341 aaKnown RBP eCLIP0.93□□□□□ -2.267e-7■■■■■ 232.7
SMC4-227ENST00000497984 ZNF436Q9C0F3 470 aaPredicted RBP0.93□□□□□ -2.26
SMC4-227ENST00000497984 SLC38A1Q9H2H9 487 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 FBXO44Q9H4M3 255 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 C12orf4Q9NQ89 552 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 CHRAC1Q9NRG0 131 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 OR5V1Q9UGF6 321 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 ANXA10Q9UJ72 324 aa0.93□□□□□ -2.26
SMC4-227ENST00000497984 TRAV8-7A0A075B6U6 113 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 TVP23AA6NH52 213 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 K7EN84 100 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 TCAPO15273 167 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 PDYNP01213 254 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 CTLA4P16410 223 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 ZNF22P17026 224 aaPredicted RBP0.92□□□□□ -2.26
SMC4-227ENST00000497984 M6PRP20645 277 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 MSR1P21757 451 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 CNTFRP26992 372 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 HTR2CP28335 458 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 COILP38432 576 aaPredicted RBP0.92□□□□□ -2.26
SMC4-227ENST00000497984 CEACAM16Q2WEN9 425 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 Q499Y3 187 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 SPIN4Q56A73 249 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 IDNKQ5T6J7 187 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 SYT6Q5T7P8 510 aaPredicted RBP0.92□□□□□ -2.26
SMC4-227ENST00000497984 C16orf87Q6PH81 154 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 ZNF773Q6PK81 442 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 DPPA2Q7Z7J5 298 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 GALNT10Q86SR1 603 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 LINC00523Q86TU6 105 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 CA13Q8N1Q1 262 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 OR2M3Q8NG83 312 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 OR4A15Q8NGL6 344 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 OR2V1Q8NHB1 315 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 OR2M4Q96R27 311 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 TXNDC17Q9BRA2 123 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 TTTY12Q9BZ98 90 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 FLVCR2Q9UPI3 526 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 AP3M1Q9Y2T2 418 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 DOCK6Q96HP0 2047 aa0.92□□□□□ -2.26
SMC4-227ENST00000497984 NOS1P29475 1434 aa0.91□□□□□ -2.26
SMC4-227ENST00000497984 A0A1B0GXF2 115 aa0.91□□□□□ -2.26
SMC4-227ENST00000497984 SLC5A10A0PJK1 596 aa0.91□□□□□ -2.26
SMC4-227ENST00000497984 A6NED7 52 aa0.91□□□□□ -2.26
SMC4-227ENST00000497984 CD300LBA8K4G0 201 aa0.91□□□□□ -2.26
SMC4-227ENST00000497984 SEC14L6B5MCN3 397 aa0.91□□□□□ -2.26
SMC4-227ENST00000497984 UPK2O00526 184 aa0.91□□□□□ -2.26
SMC4-227ENST00000497984 CRTAPO75718 401 aaPredicted RBP0.91□□□□□ -2.26
SMC4-227ENST00000497984 GTF2F2P13984 249 aa0.91□□□□□ -2.26
SMC4-227ENST00000497984 ELK4P28324 431 aa0.91□□□□□ -2.26
SMC4-227ENST00000497984 PSG4Q00888 419 aa0.91□□□□□ -2.26
SMC4-227ENST00000497984 GPR176Q14439 515 aa0.91□□□□□ -2.26
SMC4-227ENST00000497984 GLYATQ6IB77 296 aa0.91□□□□□ -2.26
SMC4-227ENST00000497984 TPGS1Q6ZTW0 290 aa0.91□□□□□ -2.26
SMC4-227ENST00000497984 MARCH3Q86UD3 253 aa0.91□□□□□ -2.26
SMC4-227ENST00000497984 MSRB3Q8IXL7 192 aa0.91□□□□□ -2.26
SMC4-227ENST00000497984 ARHGAP18Q8N392 663 aa0.91□□□□□ -2.26
SMC4-227ENST00000497984 ATPAF2Q8N5M1 289 aa0.91□□□□□ -2.26
SMC4-227ENST00000497984 CCL17Q92583 94 aa0.91□□□□□ -2.26
SMC4-227ENST00000497984 FMC1Q96HJ9 113 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms