RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 WDR25Q64LD2 544 aaPredicted RBP9.89□□□□□ -0.83
CUX1-210ENST00000497815 Q6P435 159 aa9.89□□□□□ -0.83
CUX1-210ENST00000497815 ZNF841Q6ZN19 808 aa9.89□□□□□ -0.83
CUX1-210ENST00000497815 USP43Q70EL4 1123 aa9.89□□□□□ -0.83
CUX1-210ENST00000497815 ZNF561Q8N587 486 aa9.89□□□□□ -0.83
CUX1-210ENST00000497815 OR51T1Q8NGJ9 327 aa9.89□□□□□ -0.83
CUX1-210ENST00000497815 KCNG3Q8TAE7 436 aa9.89□□□□□ -0.83
CUX1-210ENST00000497815 RAB2BQ8WUD1 216 aa9.89□□□□□ -0.83
CUX1-210ENST00000497815 H1FXQ92522 213 aaKnown RBP9.89□□□□□ -0.83
CUX1-210ENST00000497815 ISOC1Q96CN7 298 aa9.89□□□□□ -0.83
CUX1-210ENST00000497815 MSI2Q96DH6 328 aaKnown RBP9.89□□□□□ -0.83
CUX1-210ENST00000497815 SMR3AQ99954 134 aa9.89□□□□□ -0.83
CUX1-210ENST00000497815 TMUB1Q9BVT8 246 aa9.89□□□□□ -0.83
CUX1-210ENST00000497815 TMEM59Q9BXS4 323 aa9.89□□□□□ -0.83
CUX1-210ENST00000497815 CHST6Q9GZX3 395 aa9.89□□□□□ -0.83
CUX1-210ENST00000497815 DCSTAMPQ9H295 470 aa9.89□□□□□ -0.83
CUX1-210ENST00000497815 KAAG1Q9UBP8 84 aa9.89□□□□□ -0.83
CUX1-210ENST00000497815 SLC25A10Q9UBX3 287 aaPredicted RBP9.89□□□□□ -0.83
CUX1-210ENST00000497815 CEPT1Q9Y6K0 416 aa9.89□□□□□ -0.83
CUX1-210ENST00000497815 TEX15Q9BXT5 2789 aa9.88□□□□□ -0.83
CUX1-210ENST00000497815 TMEM272A0A1B0GTI8 110 aa9.88□□□□□ -0.83
CUX1-210ENST00000497815 TMEM14DPA8MWL7 114 aa9.88□□□□□ -0.83
CUX1-210ENST00000497815 H3BMQ9 156 aa9.88□□□□□ -0.83
CUX1-210ENST00000497815 PSPNO60542 156 aa9.88□□□□□ -0.83
CUX1-210ENST00000497815 PAHP00439 452 aa9.88□□□□□ -0.83
CUX1-210ENST00000497815 GZMKP49863 264 aa9.88□□□□□ -0.83
CUX1-210ENST00000497815 RPS27AP62979 156 aaKnown RBP9.88□□□□□ -0.83
CUX1-210ENST00000497815 QRFPP83859 136 aa9.88□□□□□ -0.83
CUX1-210ENST00000497815 EDDM3AQ14507 147 aa9.88□□□□□ -0.83
CUX1-210ENST00000497815 IL13RA2Q14627 380 aa9.88□□□□□ -0.83
CUX1-210ENST00000497815 ATAD3CQ5T2N8 411 aa9.88□□□□□ -0.83
CUX1-210ENST00000497815 BRICD5Q6PL45 260 aa9.88□□□□□ -0.83
CUX1-210ENST00000497815 C17orf107Q6ZR85 190 aa9.88□□□□□ -0.83
CUX1-210ENST00000497815 OR2W3Q7Z3T1 314 aa9.88□□□□□ -0.83
CUX1-210ENST00000497815 LINC01356Q8N9X3 169 aa9.88□□□□□ -0.83
CUX1-210ENST00000497815 LGALS14Q8TCE9 139 aa9.88□□□□□ -0.83
CUX1-210ENST00000497815 SLC25A46Q96AG3 418 aa9.88□□□□□ -0.83
CUX1-210ENST00000497815 MRPS24Q96EL2 167 aaKnown RBP9.88□□□□□ -0.83
CUX1-210ENST00000497815 Q96M66 194 aa9.88□□□□□ -0.83
CUX1-210ENST00000497815 NICN1Q9BSH3 213 aa9.88□□□□□ -0.83
CUX1-210ENST00000497815 PPA2Q9H2U2 334 aa9.88□□□□□ -0.83
CUX1-210ENST00000497815 ING3Q9NXR8 418 aa9.88□□□□□ -0.83
CUX1-210ENST00000497815 OR5V1Q9UGF6 321 aa9.88□□□□□ -0.83
CUX1-210ENST00000497815 KIAA1324LA8MWY0 1029 aaPredicted RBP9.87□□□□□ -0.83
CUX1-210ENST00000497815 B4DSR2 109 aa9.87□□□□□ -0.83
CUX1-210ENST00000497815 SLC33A1O00400 549 aaPredicted RBP9.87□□□□□ -0.83
CUX1-210ENST00000497815 ZNF737O75373 536 aa9.87□□□□□ -0.83
CUX1-210ENST00000497815 FOXH1O75593 365 aa9.87□□□□□ -0.83
CUX1-210ENST00000497815 TGFAP01135 160 aa9.87□□□□□ -0.83
CUX1-210ENST00000497815 TK1P04183 234 aa9.87□□□□□ -0.83
CUX1-210ENST00000497815 MSMBP08118 114 aa9.87□□□□□ -0.83
CUX1-210ENST00000497815 CFPP27918 469 aa9.87□□□□□ -0.83
CUX1-210ENST00000497815 RANBP1P43487 201 aa9.87□□□□□ -0.83
CUX1-210ENST00000497815 OR3A1P47881 315 aa9.87□□□□□ -0.83
CUX1-210ENST00000497815 NPY4RP50391 375 aa9.87□□□□□ -0.83
CUX1-210ENST00000497815 EFNB2P52799 333 aa9.87□□□□□ -0.83
CUX1-210ENST00000497815 GRK1Q15835 563 aa9.87□□□□□ -0.83
CUX1-210ENST00000497815 PAN3Q58A45 887 aaKnown RBP9.87□□□□□ -0.83
CUX1-210ENST00000497815 NHLRC3Q5JS37 347 aa9.87□□□□□ -0.83
CUX1-210ENST00000497815 CYB5R2Q6BCY4 276 aa9.87□□□□□ -0.83
CUX1-210ENST00000497815 BTN2A1Q7KYR7 527 aa9.87□□□□□ -0.83
CUX1-210ENST00000497815 CROCCP3Q8IVE0 287 aa9.87□□□□□ -0.83
CUX1-210ENST00000497815 BPIFB2Q8N4F0 458 aa9.87□□□□□ -0.83
CUX1-210ENST00000497815 OR4S1Q8NGB4 309 aa9.87□□□□□ -0.83
CUX1-210ENST00000497815 OR4M1Q8NGD0 313 aa9.87□□□□□ -0.83
CUX1-210ENST00000497815 BARHL1Q9BZE3 327 aa9.87□□□□□ -0.83
CUX1-210ENST00000497815 LPAR5Q9H1C0 372 aa9.87□□□□□ -0.83
CUX1-210ENST00000497815 AKAP9Q99996 3911 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 MYO9AB2RTY4 2548 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 LOC105371242A0A075B767 164 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 A0A0A6YYD4 124 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 TRAV24A0A0B4J272 114 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 MEX3AA1L020 520 aaKnown RBP9.86□□□□□ -0.83
CUX1-210ENST00000497815 C22orf46C9J442 243 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 K7N7A8 449 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 LDLRAD4O15165 306 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 CPT2P23786 658 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 VEGFCP49767 419 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 EDDM3BP56851 147 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 ATXN7L3Q14CW9 347 aaPredicted RBP9.86□□□□□ -0.83
CUX1-210ENST00000497815 MPV17LQ2QL34 196 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 NKAPLQ5M9Q1 402 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 GDPD3Q7L5L3 318 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 LINC00596Q86U02 117 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 OR8H2Q8N162 312 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 TPRX1Q8N7U7 411 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 SUMF2Q8NBJ7 301 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 CHST4Q8NCG5 386 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 OR5H6Q8NGV6 325 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 PPP1R35Q8TAP8 253 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 NEK7Q8TDX7 302 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 C1orf159Q96HA4 380 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 CYYR1Q96J86 154 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 SNX22Q96L94 193 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 BCL7BQ9BQE9 202 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 URM1Q9BTM9 101 aaKnown RBP9.86□□□□□ -0.83
CUX1-210ENST00000497815 DPCDQ9BVM2 203 aaPredicted RBP9.86□□□□□ -0.83
CUX1-210ENST00000497815 SHARPINQ9H0F6 387 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 FAM234AQ9H0X4 552 aa9.86□□□□□ -0.83
CUX1-210ENST00000497815 RBM38Q9H0Z9 239 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms