RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 DBTP11182 482 aaKnown RBP12.2□□□□□ -0.46
NEK4-206ENST00000496822 JUNBP17275 347 aaPredicted RBP12.2□□□□□ -0.46
NEK4-206ENST00000496822 PRKACBP22694 351 aa12.2□□□□□ -0.46
NEK4-206ENST00000496822 GABRR1P24046 479 aa12.2□□□□□ -0.46
NEK4-206ENST00000496822 RAB13P51153 203 aa12.2□□□□□ -0.46
NEK4-206ENST00000496822 CCR9P51686 369 aa12.2□□□□□ -0.46
NEK4-206ENST00000496822 EFNB2P52799 333 aa12.2□□□□□ -0.46
NEK4-206ENST00000496822 LGALS4P56470 323 aa12.2□□□□□ -0.46
NEK4-206ENST00000496822 RAB40BQ12829 278 aa12.2□□□□□ -0.46
NEK4-206ENST00000496822 ZNF146Q15072 292 aa12.2□□□□□ -0.46
NEK4-206ENST00000496822 GRK1Q15835 563 aa12.2□□□□□ -0.46
NEK4-206ENST00000496822 RBM48Q5RL73 367 aaKnown RBP12.2□□□□□ -0.46
NEK4-206ENST00000496822 C6orf141Q5SZD1 244 aa12.2□□□□□ -0.46
NEK4-206ENST00000496822 ZNF626Q68DY1 528 aa12.2□□□□□ -0.46
NEK4-206ENST00000496822 LHFPL2Q6ZUX7 228 aa12.2□□□□□ -0.46
NEK4-206ENST00000496822 LHFPL3Q86UP9 236 aa12.2□□□□□ -0.46
NEK4-206ENST00000496822 Q8IYB0 196 aa12.2□□□□□ -0.46
NEK4-206ENST00000496822 OR5D18Q8NGL1 313 aa12.2□□□□□ -0.46
NEK4-206ENST00000496822 OR13C3Q8NGS6 347 aa12.2□□□□□ -0.46
NEK4-206ENST00000496822 APH1BQ8WW43 257 aa12.2□□□□□ -0.46
NEK4-206ENST00000496822 MRPL48Q96GC5 212 aaKnown RBP12.2□□□□□ -0.46
NEK4-206ENST00000496822 ZNF714Q96N38 554 aa12.2□□□□□ -0.46
NEK4-206ENST00000496822 OPALINQ96PE5 141 aa12.2□□□□□ -0.46
NEK4-206ENST00000496822 ALG8Q9BVK2 526 aa12.2□□□□□ -0.46
NEK4-206ENST00000496822 ISG20L2Q9H9L3 353 aaKnown RBP12.2□□□□□ -0.46
NEK4-206ENST00000496822 AMBNQ9NP70 447 aa12.2□□□□□ -0.46
NEK4-206ENST00000496822 PLCXD1Q9NUJ7 323 aa12.2□□□□□ -0.46
NEK4-206ENST00000496822 HHLA2Q9UM44 414 aa12.2□□□□□ -0.46
NEK4-206ENST00000496822 E9PI62 339 aa12.19□□□□□ -0.46
NEK4-206ENST00000496822 SIRPB1O00241 398 aa12.19□□□□□ -0.46
NEK4-206ENST00000496822 FADS2O95864 444 aaKnown RBP12.19□□□□□ -0.46
NEK4-206ENST00000496822 OR3A1P47881 315 aa12.19□□□□□ -0.46
NEK4-206ENST00000496822 ACTA2P62736 377 aa12.19□□□□□ -0.46
NEK4-206ENST00000496822 ACTG2P63267 376 aa12.19□□□□□ -0.46
NEK4-206ENST00000496822 MEF2CQ06413 473 aaPredicted RBP12.19□□□□□ -0.46
NEK4-206ENST00000496822 PDZK1IP1Q13113 114 aa12.19□□□□□ -0.46
NEK4-206ENST00000496822 ALKBH1Q13686 389 aaKnown RBP12.19□□□□□ -0.46
NEK4-206ENST00000496822 GALEQ14376 348 aa12.19□□□□□ -0.46
NEK4-206ENST00000496822 CCBE1Q6UXH8 406 aaPredicted RBP12.19□□□□□ -0.46
NEK4-206ENST00000496822 ZNF676Q8N7Q3 588 aa12.19□□□□□ -0.46
NEK4-206ENST00000496822 BPIFB6Q8NFQ5 453 aa12.19□□□□□ -0.46
NEK4-206ENST00000496822 OR11H6Q8NGC7 330 aa12.19□□□□□ -0.46
NEK4-206ENST00000496822 OR4C13Q8NGP0 309 aa12.19□□□□□ -0.46
NEK4-206ENST00000496822 OR13D1Q8NGV5 346 aa12.19□□□□□ -0.46
NEK4-206ENST00000496822 SPSB1Q96BD6 273 aa12.19□□□□□ -0.46
NEK4-206ENST00000496822 ZNF649Q9BS31 505 aa12.19□□□□□ -0.46
NEK4-206ENST00000496822 YTHDF1Q9BYJ9 559 aaKnown RBP12.19□□□□□ -0.46
NEK4-206ENST00000496822 SEBOXQ9HB31 216 aaPredicted RBP12.19□□□□□ -0.46
NEK4-206ENST00000496822 HMG20AQ9NP66 347 aa12.19□□□□□ -0.46
NEK4-206ENST00000496822 CNOT2Q9NZN8 540 aaKnown RBP12.19□□□□□ -0.46
NEK4-206ENST00000496822 FOXJ3Q9UPW0 622 aa12.19□□□□□ -0.46
NEK4-206ENST00000496822 GSTK1Q9Y2Q3 226 aa12.19□□□□□ -0.46
NEK4-206ENST00000496822 LINC00312Q9Y6C7 94 aa12.19□□□□□ -0.46
NEK4-206ENST00000496822 hADV38S2A0JD32 116 aa12.18□□□□□ -0.46
NEK4-206ENST00000496822 VGLL3A8MV65 326 aa12.18□□□□□ -0.46
NEK4-206ENST00000496822 MMP23AO75900 390 aa12.18□□□□□ -0.46
NEK4-206ENST00000496822 CYB5AP00167 134 aa12.18□□□□□ -0.46
NEK4-206ENST00000496822 MT-ND2P03891 347 aa12.18□□□□□ -0.46
NEK4-206ENST00000496822 KIR2DS4P43632 304 aa12.18□□□□□ -0.46
NEK4-206ENST00000496822 DYNC1I2Q13409 638 aaKnown RBP12.18□□□□□ -0.46
NEK4-206ENST00000496822 FAM189A2Q15884 450 aa12.18□□□□□ -0.46
NEK4-206ENST00000496822 SSX2Q16385 188 aa12.18□□□□□ -0.46
NEK4-206ENST00000496822 PDLIM3Q53GG5 364 aaPredicted RBP12.18□□□□□ -0.46
NEK4-206ENST00000496822 SPIN3Q5JUX0 258 aa12.18□□□□□ -0.46
NEK4-206ENST00000496822 BAIAP2L2Q6UXY1 529 aa12.18□□□□□ -0.46
NEK4-206ENST00000496822 TMEM219Q86XT9 240 aa12.18□□□□□ -0.46
NEK4-206ENST00000496822 KLHDC1Q8N7A1 406 aa12.18□□□□□ -0.46
NEK4-206ENST00000496822 C11orf44Q8N8P7 122 aa12.18□□□□□ -0.46
NEK4-206ENST00000496822 FAM110DQ8TAY7 271 aaPredicted RBP12.18□□□□□ -0.46
NEK4-206ENST00000496822 FOXRED1Q96CU9 486 aaPredicted RBP12.18□□□□□ -0.46
NEK4-206ENST00000496822 NKX3-1Q99801 234 aaPredicted RBP12.18□□□□□ -0.46
NEK4-206ENST00000496822 RANBP3Q9H6Z4 567 aaPredicted RBP12.18□□□□□ -0.46
NEK4-206ENST00000496822 TCF19Q9Y242 345 aa12.18□□□□□ -0.46
NEK4-206ENST00000496822 TBL2Q9Y4P3 447 aaKnown RBP12.18□□□□□ -0.46
NEK4-206ENST00000496822 NOTCH1P46531 2555 aa12.17□□□□□ -0.46
NEK4-206ENST00000496822 IGHV2-26A0A0B4J1V2 119 aa12.17□□□□□ -0.46
NEK4-206ENST00000496822 MGST3O14880 152 aa12.17□□□□□ -0.46
NEK4-206ENST00000496822 KDM4BO94953 1096 aa12.17□□□□□ -0.46
NEK4-206ENST00000496822 ZFPL1O95159 310 aa12.17□□□□□ -0.46
NEK4-206ENST00000496822 OR2H2O95918 312 aa12.17□□□□□ -0.46
NEK4-206ENST00000496822 OCM2P0CE71 109 aa12.17□□□□□ -0.46
NEK4-206ENST00000496822 OCMP0CE72 109 aaPredicted RBP12.17□□□□□ -0.46
NEK4-206ENST00000496822 MYL12AP19105 171 aa12.17□□□□□ -0.46
NEK4-206ENST00000496822 P2RX3P56373 397 aa12.17□□□□□ -0.46
NEK4-206ENST00000496822 HABP2Q14520 560 aaPredicted RBP12.17□□□□□ -0.46
NEK4-206ENST00000496822 HERPUD1Q15011 391 aa12.17□□□□□ -0.46
NEK4-206ENST00000496822 SMN1Q16637 294 aaKnown RBP12.17□□□□□ -0.46
NEK4-206ENST00000496822 C2orf68Q2NKX9 166 aa12.17□□□□□ -0.46
NEK4-206ENST00000496822 LIAT1Q6ZQX7 453 aa12.17□□□□□ -0.46
NEK4-206ENST00000496822 SYS1Q8N2H4 156 aa12.17□□□□□ -0.46
NEK4-206ENST00000496822 STX19Q8N4C7 294 aa12.17□□□□□ -0.46
NEK4-206ENST00000496822 OR52I1Q8NGK6 324 aa12.17□□□□□ -0.46
NEK4-206ENST00000496822 OR2T6Q8NHC8 308 aa12.17□□□□□ -0.46
NEK4-206ENST00000496822 MYDGFQ969H8 173 aa12.17□□□□□ -0.46
NEK4-206ENST00000496822 PDCD1LG2Q9BQ51 273 aa12.17□□□□□ -0.46
NEK4-206ENST00000496822 NPFFR1Q9GZQ6 430 aa12.17□□□□□ -0.46
NEK4-206ENST00000496822 ZNF702PQ9H963 129 aa12.17□□□□□ -0.46
NEK4-206ENST00000496822 RAB18Q9NP72 206 aa12.17□□□□□ -0.46
NEK4-206ENST00000496822 EXOSC4Q9NPD3 245 aaKnown RBP12.17□□□□□ -0.46
NEK4-206ENST00000496822 INPP5EQ9NRR6 644 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms