RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 SLC38A6Q8IZM9 456 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 FDCSPQ8NFU4 85 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 OR5P3Q8WZ94 311 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 AQP10Q96PS8 301 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 GLRX2Q9NS18 164 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 FAM86C1Q9NVL1 165 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 MTCH1Q9NZJ7 389 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 GSKIPQ9P0R6 139 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 CLCF1Q9UBD9 225 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 KCNIP3Q9Y2W7 256 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 TPT1P13693 172 aaKnown RBP11.19□□□□□ -0.62
GARNL3-220ENST00000496711 UCP3P55916 312 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 HERV-K104P61576 105 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 TBC1D28Q2M2D7 210 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 IAH1Q2TAA2 248 aaPredicted RBP11.19□□□□□ -0.62
GARNL3-220ENST00000496711 PAN3Q58A45 887 aaKnown RBP11.19□□□□□ -0.62
GARNL3-220ENST00000496711 TFAP2EQ6VUC0 442 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 EIF4E3Q8N5X7 224 aaKnown RBP11.19□□□□□ -0.62
GARNL3-220ENST00000496711 BVESQ8NE79 360 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 RTN4IP1Q8WWV3 396 aaPredicted RBP11.19□□□□□ -0.62
GARNL3-220ENST00000496711 GALNT14Q96FL9 552 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 LINC00052Q96N35 136 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 OR51B6Q9H340 312 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 SLC2A9Q9NRM0 540 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 DNAJB11Q9UBS4 358 aa11.19□□□□□ -0.62
GARNL3-220ENST00000496711 MSGN1A6NI15 193 aa11.18□□□□□ -0.62
GARNL3-220ENST00000496711 KRBOX1C9JBD0 128 aa11.18□□□□□ -0.62
GARNL3-220ENST00000496711 TEX46H3BTG2 121 aa11.18□□□□□ -0.62
GARNL3-220ENST00000496711 J3QW42 95 aa11.18□□□□□ -0.62
GARNL3-220ENST00000496711 LRP3O75074 770 aa11.18□□□□□ -0.62
GARNL3-220ENST00000496711 OR5AC1P0C628 307 aa11.18□□□□□ -0.62
GARNL3-220ENST00000496711 NAAAQ02083 359 aa11.18□□□□□ -0.62
GARNL3-220ENST00000496711 SRSF7Q16629 238 aaKnown RBP eCLIP11.18□□□□□ -0.62
GARNL3-220ENST00000496711 GGNBP1Q5YKI7 109 aa11.18□□□□□ -0.62
GARNL3-220ENST00000496711 IGFL2Q6UWQ7 119 aa11.18□□□□□ -0.62
GARNL3-220ENST00000496711 LINC00596Q86U02 117 aa11.18□□□□□ -0.62
GARNL3-220ENST00000496711 MRPL24Q96A35 216 aaKnown RBP11.18□□□□□ -0.62
GARNL3-220ENST00000496711 SUCNR1Q9BXA5 334 aa11.18□□□□□ -0.62
GARNL3-220ENST00000496711 SHARPINQ9H0F6 387 aa11.18□□□□□ -0.62
GARNL3-220ENST00000496711 PLK3Q9H4B4 646 aa11.18□□□□□ -0.62
GARNL3-220ENST00000496711 BARX1Q9HBU1 254 aaPredicted RBP11.18□□□□□ -0.62
GARNL3-220ENST00000496711 IL36RNQ9UBH0 155 aa11.18□□□□□ -0.62
GARNL3-220ENST00000496711 TUBD1Q9UJT1 453 aa11.18□□□□□ -0.62
GARNL3-220ENST00000496711 TMA7Q9Y2S6 64 aaKnown RBP11.18□□□□□ -0.62
GARNL3-220ENST00000496711 TTC28Q96AY4 2481 aa11.18□□□□□ -0.62
GARNL3-220ENST00000496711 SYNGR1O43759 233 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 LILRA1O75019 489 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 NAPSAO96009 420 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 PRKACAP17612 351 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 AADACP22760 399 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 GNG3P63215 75 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 TMEM187Q14656 261 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 PHLDA2Q53GA4 152 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 HAGHLQ6PII5 290 aaPredicted RBP11.17□□□□□ -0.62
GARNL3-220ENST00000496711 ZNF573Q86YE8 665 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 CCDC71LQ8N9Z2 235 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 SUN5Q8TC36 379 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 CCDC120Q96HB5 630 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 HS3ST6Q96QI5 342 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 SYT3Q9BQG1 590 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 RSRP1Q9BUV0 290 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 CYTL1Q9NRR1 136 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 FAM186AA6NE01 2351 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 PPYP01298 95 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 ZNF14P17017 642 aaPredicted RBP11.17□□□□□ -0.62
GARNL3-220ENST00000496711 TGFBR3Q03167 851 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 SMCO1Q147U7 214 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 C1QTNF12Q5T7M4 302 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 OR2T2Q6IF00 324 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 FAM219AQ8IW50 185 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 BAP18Q8IXM2 172 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 LRTM2Q8N967 370 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 OR5T2Q8NGG2 359 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 NEK7Q8TDX7 302 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 CNTNAP3BQ96NU0 1288 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 TRIB1Q96RU8 372 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 CNTNAP3Q9BZ76 1288 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 PKIBQ9C010 78 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 DNTTIP1Q9H147 329 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 Q9N2K0 584 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 SHANK1Q9Y566 2161 aa11.17□□□□□ -0.62
GARNL3-220ENST00000496711 TRAV17A0A0B4J275 112 aa11.16□□□□□ -0.62
GARNL3-220ENST00000496711 SCO1O75880 301 aa11.16□□□□□ -0.62
GARNL3-220ENST00000496711 WT1P19544 449 aaPredicted RBP11.16□□□□□ -0.62
GARNL3-220ENST00000496711 IGHV1-2P23083 117 aa11.16□□□□□ -0.62
GARNL3-220ENST00000496711 NUBP1P53384 320 aa11.16□□□□□ -0.62
GARNL3-220ENST00000496711 UBE2NP61088 152 aaKnown RBP11.16□□□□□ -0.62
GARNL3-220ENST00000496711 IL24Q13007 206 aa11.16□□□□□ -0.62
GARNL3-220ENST00000496711 MRPL49Q13405 166 aaKnown RBP11.16□□□□□ -0.62
GARNL3-220ENST00000496711 IL13RA2Q14627 380 aa11.16□□□□□ -0.62
GARNL3-220ENST00000496711 IGSF11Q5DX21 431 aa11.16□□□□□ -0.62
GARNL3-220ENST00000496711 FAM209AQ5JX71 171 aa11.16□□□□□ -0.62
GARNL3-220ENST00000496711 SPATA46Q5T0L3 261 aa11.16□□□□□ -0.62
GARNL3-220ENST00000496711 IGF2-ASQ6U949 168 aa11.16□□□□□ -0.62
GARNL3-220ENST00000496711 LIAT1Q6ZQX7 453 aa11.16□□□□□ -0.62
GARNL3-220ENST00000496711 FOXRED2Q8IWF2 684 aa11.16□□□□□ -0.62
GARNL3-220ENST00000496711 CCDC36Q8IYA8 594 aa11.16□□□□□ -0.62
GARNL3-220ENST00000496711 GCNT2Q8N0V5 402 aa11.16□□□□□ -0.62
GARNL3-220ENST00000496711 SLC5A7Q9GZV3 580 aa11.16□□□□□ -0.62
GARNL3-220ENST00000496711 SPACA1Q9HBV2 294 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms