RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 SRSF7Q16629 238 aaKnown RBP eCLIP9.53□□□□□ -0.88
CMSS1-208ENST00000496116 MPV17LQ2QL34 196 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 FAM71E2Q8N5Q1 922 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 LRTM2Q8N967 370 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 TMEM178AQ8NBL3 297 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 OR5T2Q8NGG2 359 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 OR5A2Q8NGI9 324 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 OR5L1Q8NGL2 311 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 HPSE2Q8WWQ2 592 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 EXTL1Q92935 676 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 TMEM100Q9NV29 134 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 ASF1BQ9NVP2 202 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 GPR179Q6PRD1 2367 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 ZNF407Q9C0G0 2248 aa9.53□□□□□ -0.88
CMSS1-208ENST00000496116 TRGV5A0A0B4J1U4 118 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 LOC105371267A0A1B0GV96 52 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 ANKRD30BLA7E2S9 258 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 ZNF732B4DXR9 585 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 BET1O15155 118 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 HKR1P10072 659 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 ZNF766Q5HY98 468 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 Q6ZS49 121 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 SPERTQ8NA61 448 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 OR1S2Q8NGQ3 325 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 TMED6Q8WW62 240 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 MRPL24Q96A35 216 aaKnown RBP9.52□□□□□ -0.89
CMSS1-208ENST00000496116 NARS2Q96I59 477 aaKnown RBP9.52□□□□□ -0.89
CMSS1-208ENST00000496116 PLK3Q9H4B4 646 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 GP6Q9HCN6 339 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 OR2S2Q9NQN1 319 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 FBXO9Q9UK97 447 aaPredicted RBP9.52□□□□□ -0.89
CMSS1-208ENST00000496116 LIPGQ9Y5X9 500 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 ARHGAP21Q5T5U3 1957 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 ARGFXA6NJG6 315 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 CD300LBA8K4G0 201 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 ZNF205O95201 554 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 DIRAS3O95661 229 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 NGFP01138 241 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 PPYP01298 95 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 CD82P27701 267 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 RPL12P30050 165 aaKnown RBP9.52□□□□□ -0.89
CMSS1-208ENST00000496116 BTN1A1Q13410 526 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 TRIP6Q15654 476 aaKnown RBP9.52□□□□□ -0.89
CMSS1-208ENST00000496116 PHLDA2Q53GA4 152 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 FBXW9Q5XUX1 488 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 LIAT1Q6ZQX7 453 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 LINC00596Q86U02 117 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 FAM185AQ8N0U4 392 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 LGI3Q8N145 548 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 BATF2Q8N1L9 274 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 OR1K1Q8NGR3 316 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 ARL11Q969Q4 196 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 PRRX2Q99811 253 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 RSRP1Q9BUV0 290 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 DEFB127Q9H1M4 99 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 C12orf49Q9H741 205 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 PRSS50Q9UI38 385 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 SSUH2Q9Y2M2 353 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 LSM5Q9Y4Y9 91 aaKnown RBP9.52□□□□□ -0.89
CMSS1-208ENST00000496116 MPC1Q9Y5U8 109 aa9.52□□□□□ -0.89
CMSS1-208ENST00000496116 NCOR1O75376 2440 aa9.51□□□□□ -0.89
CMSS1-208ENST00000496116 SLC22A20A6NK97 555 aa9.51□□□□□ -0.89
CMSS1-208ENST00000496116 SCGB1D2O95969 90 aa9.51□□□□□ -0.89
CMSS1-208ENST00000496116 TK1P04183 234 aa9.51□□□□□ -0.89
CMSS1-208ENST00000496116 SP6Q3SY56 376 aa9.51□□□□□ -0.89
CMSS1-208ENST00000496116 ZNF573Q86YE8 665 aa9.51□□□□□ -0.89
CMSS1-208ENST00000496116 WDYHV1Q96HA8 205 aa9.51□□□□□ -0.89
CMSS1-208ENST00000496116 PLEKHA2Q9HB19 425 aa9.51□□□□□ -0.89
CMSS1-208ENST00000496116 TAF9BQ9HBM6 251 aa9.51□□□□□ -0.89
CMSS1-208ENST00000496116 SPACA1Q9HBV2 294 aa9.51□□□□□ -0.89
CMSS1-208ENST00000496116 RCC2Q9P258 522 aaKnown RBP9.51□□□□□ -0.89
CMSS1-208ENST00000496116 KIR2DS1A0A191URI9 304 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 OR5B21A6NL26 309 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 E5RGE8 158 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 PHF1O43189 567 aaPredicted RBP9.5□□□□□ -0.89
CMSS1-208ENST00000496116 LRP3O75074 770 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 JTBO76095 146 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 AADACP22760 399 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 DUSP1P28562 367 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 KIR2DS4P43632 304 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 SRPXP78539 464 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 KIR2DS1Q14954 304 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 DAZAP2Q15038 168 aaPredicted RBP9.5□□□□□ -0.89
CMSS1-208ENST00000496116 HIKESHIQ53FT3 197 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 FAM219AQ8IW50 185 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 BPIFCQ8NFQ6 507 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 NEK7Q8TDX7 302 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 C18orf12Q96KH6 178 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 FGF23Q9GZV9 251 aaPredicted RBP9.5□□□□□ -0.89
CMSS1-208ENST00000496116 RIMS4Q9H426 269 aaPredicted RBP9.5□□□□□ -0.89
CMSS1-208ENST00000496116 ZNF552Q9H707 407 aaPredicted RBP9.5□□□□□ -0.89
CMSS1-208ENST00000496116 Q9N2K0 584 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 MTCH1Q9NZJ7 389 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 NSG2Q9Y328 171 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 ZNF705EA8MWA4 302 aaPredicted RBP9.5□□□□□ -0.89
CMSS1-208ENST00000496116 TSPAN4O14817 238 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 IL18BPO95998 194 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 NAPSAO96009 420 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 GAPDHP04406 335 aaKnown RBP9.5□□□□□ -0.89
CMSS1-208ENST00000496116 CTXN2P0C2S0 81 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms