RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 RPS4Y2Q8TD47 263 aa10.31□□□□□ -0.76
PTPRF-214ENST00000496043 RFT1Q96AA3 541 aa10.31□□□□□ -0.76
PTPRF-214ENST00000496043 NKX3-1Q99801 234 aaPredicted RBP10.31□□□□□ -0.76
PTPRF-214ENST00000496043 COMMD4Q9H0A8 199 aa10.31□□□□□ -0.76
PTPRF-214ENST00000496043 ISG20L2Q9H9L3 353 aaKnown RBP10.31□□□□□ -0.76
PTPRF-214ENST00000496043 EXOSC4Q9NPD3 245 aaKnown RBP10.31□□□□□ -0.76
PTPRF-214ENST00000496043 MRPS18AQ9NVS2 196 aaKnown RBP10.31□□□□□ -0.76
PTPRF-214ENST00000496043 ERVK13-1Q9NX77 482 aa10.31□□□□□ -0.76
PTPRF-214ENST00000496043 PITPNC1Q9UKF7 332 aa10.31□□□□□ -0.76
PTPRF-214ENST00000496043 UBE2J1Q9Y385 318 aaPredicted RBP10.31□□□□□ -0.76
PTPRF-214ENST00000496043 SESN1Q9Y6P5 492 aa10.31□□□□□ -0.76
PTPRF-214ENST00000496043 PKD1L1Q8TDX9 2849 aa10.31□□□□□ -0.76
PTPRF-214ENST00000496043 IGKV1-12A0A0C4DH73 117 aa10.3□□□□□ -0.76
PTPRF-214ENST00000496043 TMEM212A6NML5 194 aa10.3□□□□□ -0.76
PTPRF-214ENST00000496043 SIRPB1O00241 398 aa10.3□□□□□ -0.76
PTPRF-214ENST00000496043 OR2H2O95918 312 aa10.3□□□□□ -0.76
PTPRF-214ENST00000496043 IGKV1D-12P01611 117 aa10.3□□□□□ -0.76
PTPRF-214ENST00000496043 CSF1P09603 554 aa10.3□□□□□ -0.76
PTPRF-214ENST00000496043 CCDC159P0C7I6 412 aa10.3□□□□□ -0.76
PTPRF-214ENST00000496043 TMEM225BP0DP42 221 aa10.3□□□□□ -0.76
PTPRF-214ENST00000496043 LMO1P25800 156 aa10.3□□□□□ -0.76
PTPRF-214ENST00000496043 P2RX3P56373 397 aa10.3□□□□□ -0.76
PTPRF-214ENST00000496043 SCN1BQ07699 218 aa10.3□□□□□ -0.76
PTPRF-214ENST00000496043 C2orf68Q2NKX9 166 aa10.3□□□□□ -0.76
PTPRF-214ENST00000496043 PLA1AQ53H76 456 aa10.3□□□□□ -0.76
PTPRF-214ENST00000496043 MINOS1Q5TGZ0 78 aa10.3□□□□□ -0.76
PTPRF-214ENST00000496043 OR52W1Q6IF63 320 aa10.3□□□□□ -0.76
PTPRF-214ENST00000496043 TRAPPC6BQ86SZ2 158 aa10.3□□□□□ -0.76
PTPRF-214ENST00000496043 PQLC1Q8N2U9 271 aa10.3□□□□□ -0.76
PTPRF-214ENST00000496043 ZNF555Q8NEP9 628 aa10.3□□□□□ -0.76
PTPRF-214ENST00000496043 OR5AK2Q8NH90 309 aa10.3□□□□□ -0.76
PTPRF-214ENST00000496043 FAM110DQ8TAY7 271 aaPredicted RBP10.3□□□□□ -0.76
PTPRF-214ENST00000496043 HAVCR2Q8TDQ0 301 aa10.3□□□□□ -0.76
PTPRF-214ENST00000496043 SPACA5Q96QH8 159 aa10.3□□□□□ -0.76
PTPRF-214ENST00000496043 TMEM133Q9H2Q1 129 aa10.3□□□□□ -0.76
PTPRF-214ENST00000496043 DHDHQ9UQ10 334 aa10.3□□□□□ -0.76
PTPRF-214ENST00000496043 MINOS1-NBL1R4GNA1 71 aa10.3□□□□□ -0.76
PTPRF-214ENST00000496043 TRGV10A0A0A0MS01 117 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 IGHV2-26A0A0B4J1V2 119 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 A0A0G2JK05 382 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 A6NDX4 124 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 E9PI62 339 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 DEGS1O15121 323 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 ZFPL1O95159 310 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 BAG2O95816 211 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 HCKP08631 526 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 ZNF44P15621 663 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 OR3A1P47881 315 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 DYNLT3P51808 116 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 KISS1Q15726 138 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 PDLIM3Q53GG5 364 aaPredicted RBP10.29□□□□□ -0.76
PTPRF-214ENST00000496043 LPCAT4Q643R3 524 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 TCF23Q7RTU1 214 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 RNF144BQ7Z419 303 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 PARP16Q8N5Y8 322 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 OR52I1Q8NGK6 324 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 OR5D18Q8NGL1 313 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 NDNFQ8TB73 568 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 CORO2AQ92828 525 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 ZNF649Q9BS31 505 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 CLEC7AQ9BXN2 247 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 GAL3ST2Q9H3Q3 398 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 TAS2R3Q9NYW6 316 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 TCF19Q9Y242 345 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 HILPDAQ9Y5L2 63 aa10.29□□□□□ -0.76
PTPRF-214ENST00000496043 MAGEB3O15480 346 aa10.28□□□□□ -0.76
PTPRF-214ENST00000496043 SULT1B1O43704 296 aa10.28□□□□□ -0.76
PTPRF-214ENST00000496043 CHST1O43916 411 aa10.28□□□□□ -0.76
PTPRF-214ENST00000496043 VSIG10L2P0DP72 767 aa10.28□□□□□ -0.76
PTPRF-214ENST00000496043 HTR1DP28221 377 aa10.28□□□□□ -0.76
PTPRF-214ENST00000496043 SLC34A1Q06495 639 aa10.28□□□□□ -0.76
PTPRF-214ENST00000496043 AESQ08117 197 aa10.28□□□□□ -0.76
PTPRF-214ENST00000496043 LDLRAD2Q5SZI1 272 aa10.28□□□□□ -0.76
PTPRF-214ENST00000496043 Q6P435 159 aa10.28□□□□□ -0.76
PTPRF-214ENST00000496043 CCBE1Q6UXH8 406 aaPredicted RBP10.28□□□□□ -0.76
PTPRF-214ENST00000496043 RTN4RL2Q86UN3 420 aa10.28□□□□□ -0.76
PTPRF-214ENST00000496043 ABHD12Q8N2K0 398 aa10.28□□□□□ -0.76
PTPRF-214ENST00000496043 KLHDC1Q8N7A1 406 aa10.28□□□□□ -0.76
PTPRF-214ENST00000496043 CHST4Q8NCG5 386 aa10.28□□□□□ -0.76
PTPRF-214ENST00000496043 TSEN15Q8WW01 171 aaKnown RBP10.28□□□□□ -0.76
PTPRF-214ENST00000496043 PDCD1LG2Q9BQ51 273 aa10.28□□□□□ -0.76
PTPRF-214ENST00000496043 PRSS22Q9GZN4 317 aa10.28□□□□□ -0.76
PTPRF-214ENST00000496043 FGF20Q9NP95 211 aaPredicted RBP10.28□□□□□ -0.76
PTPRF-214ENST00000496043 FOXJ3Q9UPW0 622 aa10.28□□□□□ -0.76
PTPRF-214ENST00000496043 F2RL2O00254 374 aa10.27□□□□□ -0.77
PTPRF-214ENST00000496043 MMP23AO75900 390 aa10.27□□□□□ -0.77
PTPRF-214ENST00000496043 TSPAN15O95858 294 aa10.27□□□□□ -0.77
PTPRF-214ENST00000496043 RAB3AP20336 220 aa10.27□□□□□ -0.77
PTPRF-214ENST00000496043 GLIPR1P48060 266 aa10.27□□□□□ -0.77
PTPRF-214ENST00000496043 MTNR1BP49286 362 aa10.27□□□□□ -0.77
PTPRF-214ENST00000496043 IL18R1Q13478 541 aa10.27□□□□□ -0.77
PTPRF-214ENST00000496043 KRBOX4Q5JUW0 171 aa10.27□□□□□ -0.77
PTPRF-214ENST00000496043 ZNF691Q5VV52 312 aa10.27□□□□□ -0.77
PTPRF-214ENST00000496043 HEPN1Q6WQI6 88 aa10.27□□□□□ -0.77
PTPRF-214ENST00000496043 SATL1Q86VE3 508 aa10.27□□□□□ -0.77
PTPRF-214ENST00000496043 TMEM219Q86XT9 240 aa10.27□□□□□ -0.77
PTPRF-214ENST00000496043 Q8N2B8 174 aa10.27□□□□□ -0.77
PTPRF-214ENST00000496043 C11orf44Q8N8P7 122 aa10.27□□□□□ -0.77
PTPRF-214ENST00000496043 ZNF596Q8TC21 504 aa10.27□□□□□ -0.77
PTPRF-214ENST00000496043 CFHR4Q92496 578 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms