RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 GABRR1P24046 479 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 GZMKP49863 264 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 NHLRC3Q5JS37 347 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 WDR25Q64LD2 544 aaPredicted RBP12.11□□□□□ -0.47
BRCA1-223ENST00000494123 ISOC1Q96CN7 298 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 SEBOXQ9HB31 216 aaPredicted RBP12.11□□□□□ -0.47
BRCA1-223ENST00000494123 SLC25A10Q9UBX3 287 aaPredicted RBP12.11□□□□□ -0.47
BRCA1-223ENST00000494123 MAB21L2Q9Y586 359 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 A0A0B4J203 849 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 TMEM14DPA8MWL7 114 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 B4DSR2 109 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 PHF1O43189 567 aaPredicted RBP12.11□□□□□ -0.47
BRCA1-223ENST00000494123 INHBBP09529 407 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 LCN2P80188 198 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 UNC119Q13432 240 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 PDCD1Q15116 288 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 TAF9Q16594 264 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 MPV17LQ2QL34 196 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 ZNF841Q6ZN19 808 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 LINC01356Q8N9X3 169 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 CHST4Q8NCG5 386 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 PPP1R35Q8TAP8 253 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 NDNFQ8TB73 568 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 SLC25A46Q96AG3 418 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 URM1Q9BTM9 101 aaKnown RBP12.11□□□□□ -0.47
BRCA1-223ENST00000494123 TMUB1Q9BVT8 246 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 OR5V1Q9UGF6 321 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 CEPT1Q9Y6K0 416 aa12.11□□□□□ -0.47
BRCA1-223ENST00000494123 TMEM272A0A1B0GTI8 110 aa12.1□□□□□ -0.47
BRCA1-223ENST00000494123 TMEM127O75204 238 aa12.1□□□□□ -0.47
BRCA1-223ENST00000494123 TK1P04183 234 aa12.1□□□□□ -0.47
BRCA1-223ENST00000494123 IGHV4-31P0DP07 118 aa12.1□□□□□ -0.47
BRCA1-223ENST00000494123 RPS27AP62979 156 aaKnown RBP12.1□□□□□ -0.47
BRCA1-223ENST00000494123 QRFPP83859 136 aa12.1□□□□□ -0.47
BRCA1-223ENST00000494123 ATAD3CQ5T2N8 411 aa12.1□□□□□ -0.47
BRCA1-223ENST00000494123 CYB5R2Q6BCY4 276 aa12.1□□□□□ -0.47
BRCA1-223ENST00000494123 Q6P435 159 aa12.1□□□□□ -0.47
BRCA1-223ENST00000494123 H1FXQ92522 213 aaKnown RBP12.1□□□□□ -0.47
BRCA1-223ENST00000494123 C1orf159Q96HA4 380 aa12.1□□□□□ -0.47
BRCA1-223ENST00000494123 SNX22Q96L94 193 aa12.1□□□□□ -0.47
BRCA1-223ENST00000494123 Q96M66 194 aa12.1□□□□□ -0.47
BRCA1-223ENST00000494123 MRI1Q9BV20 369 aa12.1□□□□□ -0.47
BRCA1-223ENST00000494123 FAM234AQ9H0X4 552 aa12.1□□□□□ -0.47
BRCA1-223ENST00000494123 DOCK11Q5JSL3 2073 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 ABCA2Q9BZC7 2435 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 FAM90A10PA6NDY2 464 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 FAM90A18PA6NE21 464 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 FAM90A16PA6NEW6 464 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 FAM90A20PA6NIJ5 464 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 FAM90A8PA6NJQ4 464 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 FAM90A7PA6NKC0 464 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 FAM90A22PA8MWA6 464 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 FAM90A12PA8MX19 464 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 FAM90A5PA8MXJ8 464 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 A8MXK9 166 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 FAM90A23PA8MXZ1 464 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 H3BMQ9 156 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 K7N7A8 449 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 SLC33A1O00400 549 aaPredicted RBP12.09□□□□□ -0.47
BRCA1-223ENST00000494123 HSPB6O14558 160 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 GPR37O15354 613 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 MSMBP08118 114 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 FAM90A15PP0C7V4 464 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 FAM90A13PP0C7W8 464 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 FAM90A14PP0C7W9 464 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 FAM90A24PP0C7X0 464 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 SNRPBP14678 240 aaKnown RBP12.09□□□□□ -0.47
BRCA1-223ENST00000494123 FOSL1P15407 271 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 RORCP51449 518 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 SPCS2Q15005 226 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 GRK1Q15835 563 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 PAN3Q58A45 887 aaKnown RBP12.09□□□□□ -0.47
BRCA1-223ENST00000494123 CD276Q5ZPR3 534 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 GDPD3Q7L5L3 318 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 FGFRL1Q8N441 504 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 OR5D13Q8NGL4 314 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 MSI2Q96DH6 328 aaKnown RBP12.09□□□□□ -0.47
BRCA1-223ENST00000494123 CHST6Q9GZX3 395 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 FBLN5Q9UBX5 448 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 RAB22AQ9UL26 194 aa12.09□□□□□ -0.47
BRCA1-223ENST00000494123 YLPM1P49750 1951 aaKnown RBP12.09□□□□□ -0.47
BRCA1-223ENST00000494123 SMIM31A0A1B0GVY4 71 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 TMEM82A0PJX8 343 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 H3BUI4 141 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 ZNF737O75373 536 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 TGFAP01135 160 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 ZNF16P17020 682 aaPredicted RBP12.08□□□□□ -0.48
BRCA1-223ENST00000494123 LMO1P25800 156 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 ZFP36P26651 326 aaKnown RBP12.08□□□□□ -0.48
BRCA1-223ENST00000494123 FAM189A2Q15884 450 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 METAP1DQ6UB28 335 aaPredicted RBP12.08□□□□□ -0.48
BRCA1-223ENST00000494123 C17orf107Q6ZR85 190 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 BTN2A1Q7KYR7 527 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 OR8H2Q8N162 312 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 LGALS14Q8TCE9 139 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 PPA2Q9H2U2 334 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 IFT22Q9H7X7 185 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 SPACA1Q9HBV2 294 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 ABRACLQ9P1F3 81 aa12.08□□□□□ -0.48
BRCA1-223ENST00000494123 RSL24D1Q9UHA3 163 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms