RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 C10orf35Q96D05 121 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 SEC22AQ96IW7 307 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 CCL19Q99731 98 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 ARV1Q9H2C2 271 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 OR51M1Q9H341 326 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 ESRP2Q9H6T0 727 aaKnown RBP9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 CNTD2Q9H8S5 307 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 UNKLQ9H9P5 680 aaKnown RBP9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 SEBOXQ9HB31 216 aaPredicted RBP9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 TAF9BQ9HBM6 251 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 FAM206AQ9NX38 181 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 KLHL13Q9P2N7 655 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 CGGBP1Q9UFW8 167 aaPredicted RBP9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 EMC9Q9Y3B6 208 aa9.18□□□□□ -0.94
PDLIM1-205ENST00000493949 MED12LQ86YW9 2145 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 IGKV3D-11A0A0A0MRZ8 115 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 BORCS7-ASMTA0A0B4J1R7 106 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 PIGBOS1A0A0B4J2F0 54 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 MEX3AA1L020 520 aaKnown RBP9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 PCP4L1A6NKN8 68 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 COLCA2A8K830 154 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 EEF1E1-BLOC1S5C9J1V9 151 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 CCSO14618 274 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 KCNAB3O43448 404 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 SYT7O43581 403 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 HCRTR2O43614 444 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 FBXO45P0C2W1 286 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 SFTA3P0C7M3 94 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 VSIG8P0DPA2 414 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 CTLA4P16410 223 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 ZNF20P17024 532 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 FKBP2P26885 142 aaKnown RBP9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 MAGEA5P43359 124 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 NPBWR1P48145 328 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 SPOCK1Q08629 439 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 UNC119Q13432 240 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 ATXN7L3Q14CW9 347 aaPredicted RBP9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 CHRFAM7AQ494W8 412 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 HLA-DQA1Q5Y7H0 255 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 TMEM88Q6PEY1 159 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 UNQ6126/PRO20091Q6UXV3 157 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 SLC35D2Q76EJ3 337 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 CBLN2Q8IUK8 224 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 FAM71E2Q8N5Q1 922 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 TMEM156Q8N614 296 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 PNLDC1Q8NA58 520 aaKnown RBP9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 CHST4Q8NCG5 386 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 OR10H5Q8NGA6 315 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 OR1J1Q8NGS3 322 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 SLC25A43Q8WUT9 341 aaPredicted RBP9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 DAZLQ92904 295 aaKnown RBP9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 ADIPOR1Q96A54 375 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 RAB3CQ96E17 227 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 CPNE2Q96FN4 548 aaPredicted RBP9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 TMEM41AQ96HV5 264 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 PBDC1Q9BVG4 233 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 C19orf24Q9BVV8 132 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 DEFB126Q9BYW3 111 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 TBL1XR1Q9BZK7 514 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 C14orf166Q9Y224 244 aaKnown RBP9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 B3GALT5Q9Y2C3 310 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 STARD10Q9Y365 291 aa9.17□□□□□ -0.94
PDLIM1-205ENST00000493949 TRBV11-1A0A0K0K1C0 115 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 BTBD17A6NE02 478 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 FAM157AC9JC47 383 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 ZNF878C9JN71 531 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 FTCDNL1E5RQL4 147 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 HRKO00198 91 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 ETV2O00321 342 aaPredicted RBP9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 OIP5O43482 229 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 SPRY1O43609 319 aaPredicted RBP9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 CD5LO43866 347 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 IFNA21P01568 189 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 MUC1P15941 1255 aaPredicted RBP9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 AKR1C4P17516 323 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 ZNF93P35789 620 aaPredicted RBP9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 GNALP38405 381 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 APOBEC1P41238 236 aaKnown RBP9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 ZNF133P52736 654 aaPredicted RBP9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 MOGAT2Q3SYC2 334 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 GPR157Q5UAW9 335 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 CBLN3Q6UW01 205 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 C20orf204Q6ZNR8 217 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 KCTD9Q7L273 389 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 SLC29A4Q7RTT9 530 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 DCXRQ7Z4W1 244 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 FAM89BQ8N5H3 189 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 APCDD1LQ8NCL9 501 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 MARCH1Q8TCQ1 289 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 CASTOR1Q8WTX7 329 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 TCTEX1D2Q8WW35 142 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 NTNG2Q96CW9 530 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 KIRREL1Q96J84 757 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 SULT4A1Q9BR01 284 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 TMEM59Q9BXS4 323 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 SELENOIQ9C0D9 397 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 NXF5Q9H1B4 397 aaKnown RBP9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 LPAR5Q9H1C0 372 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 DECR2Q9NUI1 292 aa9.16□□□□□ -0.94
PDLIM1-205ENST00000493949 ALKBH4Q9NXW9 302 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms