RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 ZNF593O00488 134 aaPredicted RBP1.2□□□□□ -2.22
ITGB1-216ENST00000493758 RNF113AO15541 343 aaKnown RBP1.2□□□□□ -2.22
ITGB1-216ENST00000493758 PSIP1O75475 530 aaKnown RBP1.2□□□□□ -2.22
ITGB1-216ENST00000493758 CECR9P0C854 216 aa1.2□□□□□ -2.22
ITGB1-216ENST00000493758 MSR1P21757 451 aa1.2□□□□□ -2.22
ITGB1-216ENST00000493758 ZNF83P51522 516 aa1.2□□□□□ -2.22
ITGB1-216ENST00000493758 C1QTNF8P60827 252 aa1.2□□□□□ -2.22
ITGB1-216ENST00000493758 TNXAQ16473 311 aa1.2□□□□□ -2.22
ITGB1-216ENST00000493758 Q499Y3 187 aa1.2□□□□□ -2.22
ITGB1-216ENST00000493758 SPIN4Q56A73 249 aa1.2□□□□□ -2.22
ITGB1-216ENST00000493758 CLEC2AQ6UVW9 174 aa1.2□□□□□ -2.22
ITGB1-216ENST00000493758 LINC00596Q86U02 117 aa1.2□□□□□ -2.22
ITGB1-216ENST00000493758 QKIQ96PU8 341 aaKnown RBP eCLIP1.2□□□□□ -2.22
ITGB1-216ENST00000493758 OR2M4Q96R27 311 aa1.2□□□□□ -2.22
ITGB1-216ENST00000493758 ANP32EQ9BTT0 268 aa1.2□□□□□ -2.22
ITGB1-216ENST00000493758 IL22Q9GZX6 179 aa1.2□□□□□ -2.22
ITGB1-216ENST00000493758 OR2D2Q9H210 308 aa1.2□□□□□ -2.22
ITGB1-216ENST00000493758 CCL26Q9Y258 94 aa1.2□□□□□ -2.22
ITGB1-216ENST00000493758 AP3M1Q9Y2T2 418 aa1.2□□□□□ -2.22
ITGB1-216ENST00000493758 LAMA2P24043 3122 aaKnown RBP1.2□□□□□ -2.22
ITGB1-216ENST00000493758 UNC13AQ9UPW8 1703 aa1.2□□□□□ -2.22
ITGB1-216ENST00000493758 MUC3AQ02505 3323 aa1.2□□□□□ -2.22
ITGB1-216ENST00000493758 GTF2F2P13984 249 aa1.19□□□□□ -2.22
ITGB1-216ENST00000493758 CRABP2P29373 138 aa1.19□□□□□ -2.22
ITGB1-216ENST00000493758 PSG4Q00888 419 aa1.19□□□□□ -2.22
ITGB1-216ENST00000493758 CST6Q15828 149 aa1.19□□□□□ -2.22
ITGB1-216ENST00000493758 GLYATQ6IB77 296 aa1.19□□□□□ -2.22
ITGB1-216ENST00000493758 OR2M3Q8NG83 312 aa1.19□□□□□ -2.22
ITGB1-216ENST00000493758 OR4K13Q8NH42 304 aa1.19□□□□□ -2.22
ITGB1-216ENST00000493758 CERS2Q96G23 380 aa1.19□□□□□ -2.22
ITGB1-216ENST00000493758 CFAP47Q6ZTR5 3102 aa1.19□□□□□ -2.22
ITGB1-216ENST00000493758 ADGRB3O60242 1522 aa1.19□□□□□ -2.22
ITGB1-216ENST00000493758 NUP205Q92621 2012 aa1.18□□□□□ -2.22
ITGB1-216ENST00000493758 ALOX12BO75342 701 aa1.18□□□□□ -2.22
ITGB1-216ENST00000493758 DHRS3O75911 302 aa1.18□□□□□ -2.22
ITGB1-216ENST00000493758 PSMC5P62195 406 aa1.18□□□□□ -2.22
ITGB1-216ENST00000493758 GBE1Q04446 702 aa1.18□□□□□ -2.22
ITGB1-216ENST00000493758 FOXF1Q12946 379 aa1.18□□□□□ -2.22
ITGB1-216ENST00000493758 CASP8Q14790 479 aa1.18□□□□□ -2.22
ITGB1-216ENST00000493758 TPGS1Q6ZTW0 290 aa1.18□□□□□ -2.22
ITGB1-216ENST00000493758 OTUD6AQ7L8S5 288 aa1.18□□□□□ -2.22
ITGB1-216ENST00000493758 OR51A7Q8NH64 312 aa1.18□□□□□ -2.22
ITGB1-216ENST00000493758 OR2V1Q8NHB1 315 aa1.18□□□□□ -2.22
ITGB1-216ENST00000493758 TTTY12Q9BZ98 90 aa1.18□□□□□ -2.22
ITGB1-216ENST00000493758 C12orf4Q9NQ89 552 aa1.18□□□□□ -2.22
ITGB1-216ENST00000493758 PEF1Q9UBV8 284 aaKnown RBP1.18□□□□□ -2.22
ITGB1-216ENST00000493758 ZMAT5Q9UDW3 170 aaKnown RBP1.18□□□□□ -2.22
ITGB1-216ENST00000493758 PSORS1C2Q9UIG4 136 aa1.18□□□□□ -2.22
ITGB1-216ENST00000493758 ZNF706Q9Y5V0 76 aaPredicted RBP1.18□□□□□ -2.22
ITGB1-216ENST00000493758 HELZ2Q9BYK8 2649 aaKnown RBP1.18□□□□□ -2.22
ITGB1-216ENST00000493758 PRRC2BQ5JSZ5 2229 aaKnown RBP1.17□□□□□ -2.22
ITGB1-216ENST00000493758 TRBV24-1A0A075B6N3 115 aa1.17□□□□□ -2.22
ITGB1-216ENST00000493758 SLC5A10A0PJK1 596 aa1.17□□□□□ -2.22
ITGB1-216ENST00000493758 PSMD4P55036 377 aaKnown RBP1.17□□□□□ -2.22
ITGB1-216ENST00000493758 RPL31P62899 125 aaKnown RBP1.17□□□□□ -2.22
ITGB1-216ENST00000493758 WDR43Q15061 677 aaKnown RBP eCLIP1.17□□□□□ -2.22
ITGB1-216ENST00000493758 UBE2NLQ5JXB2 153 aa1.17□□□□□ -2.22
ITGB1-216ENST00000493758 UGT2A3Q6UWM9 527 aa1.17□□□□□ -2.22
ITGB1-216ENST00000493758 NELFCDQ8IXH7 590 aa1.17□□□□□ -2.22
ITGB1-216ENST00000493758 CA13Q8N1Q1 262 aa1.17□□□□□ -2.22
ITGB1-216ENST00000493758 AGR3Q8TD06 166 aa1.17□□□□□ -2.22
ITGB1-216ENST00000493758 TFGQ92734 400 aaPredicted RBP1.17□□□□□ -2.22
ITGB1-216ENST00000493758 OR2AG1Q9H205 316 aa1.17□□□□□ -2.22
ITGB1-216ENST00000493758 CXCL16Q9H2A7 254 aa1.17□□□□□ -2.22
ITGB1-216ENST00000493758 PRORYQ9H606 182 aa1.17□□□□□ -2.22
ITGB1-216ENST00000493758 CHRAC1Q9NRG0 131 aa1.17□□□□□ -2.22
ITGB1-216ENST00000493758 SDHAF3Q9NRP4 125 aa1.17□□□□□ -2.22
ITGB1-216ENST00000493758 CYB5R1Q9UHQ9 305 aa1.17□□□□□ -2.22
ITGB1-216ENST00000493758 VPREB3Q9UKI3 123 aa1.17□□□□□ -2.22
ITGB1-216ENST00000493758 RHBDD3Q9Y3P4 386 aa1.17□□□□□ -2.22
ITGB1-216ENST00000493758 LRP5O75197 1615 aa1.17□□□□□ -2.22
ITGB1-216ENST00000493758 POLR3AO14802 1390 aaPredicted RBP1.17□□□□□ -2.22
ITGB1-216ENST00000493758 MKI67P46013 3256 aaKnown RBP1.17□□□□□ -2.22
ITGB1-216ENST00000493758 SNAPC4Q5SXM2 1469 aa1.17□□□□□ -2.22
ITGB1-216ENST00000493758 CEP164Q9UPV0 1460 aa1.17□□□□□ -2.22
ITGB1-216ENST00000493758 BICRAQ9NZM4 1560 aa1.17□□□□□ -2.22
ITGB1-216ENST00000493758 NCF1BA6NI72 391 aaPredicted RBP1.16□□□□□ -2.22
ITGB1-216ENST00000493758 KNCNA6PVL3 124 aa1.16□□□□□ -2.22
ITGB1-216ENST00000493758 C17orf98A8MV24 154 aa1.16□□□□□ -2.22
ITGB1-216ENST00000493758 NCF1CA8MVU1 366 aaPredicted RBP1.16□□□□□ -2.22
ITGB1-216ENST00000493758 CASC3O15234 703 aaKnown RBP1.16□□□□□ -2.22
ITGB1-216ENST00000493758 SOX14O95416 240 aa1.16□□□□□ -2.22
ITGB1-216ENST00000493758 GPR75O95800 540 aa1.16□□□□□ -2.22
ITGB1-216ENST00000493758 STAG3L3P0CL85 134 aa1.16□□□□□ -2.22
ITGB1-216ENST00000493758 RALBP11234 206 aa1.16□□□□□ -2.22
ITGB1-216ENST00000493758 SFTPCP11686 197 aa1.16□□□□□ -2.22
ITGB1-216ENST00000493758 PSKH1P11801 424 aa1.16□□□□□ -2.22
ITGB1-216ENST00000493758 TAC1P20366 129 aa1.16□□□□□ -2.22
ITGB1-216ENST00000493758 ATP6V1FQ16864 119 aa1.16□□□□□ -2.22
ITGB1-216ENST00000493758 CEACAM16Q2WEN9 425 aa1.16□□□□□ -2.22
ITGB1-216ENST00000493758 PIP5KL1Q5T9C9 394 aa1.16□□□□□ -2.22
ITGB1-216ENST00000493758 ZNF773Q6PK81 442 aa1.16□□□□□ -2.22
ITGB1-216ENST00000493758 Q6ZRU5 148 aa1.16□□□□□ -2.22
ITGB1-216ENST00000493758 TCF23Q7RTU1 214 aa1.16□□□□□ -2.22
ITGB1-216ENST00000493758 TMCO2Q7Z6W1 182 aaPredicted RBP1.16□□□□□ -2.22
ITGB1-216ENST00000493758 NIT1Q86X76 327 aa1.16□□□□□ -2.22
ITGB1-216ENST00000493758 TMEM25Q86YD3 366 aa1.16□□□□□ -2.22
ITGB1-216ENST00000493758 GAPTQ8N292 157 aa1.16□□□□□ -2.22
ITGB1-216ENST00000493758 CMBLQ96DG6 245 aa1.16□□□□□ -2.22
ITGB1-216ENST00000493758 B9D2Q9BPU9 175 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms