RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 SH2D1BO14796 132 aa14.34□□□□□ -0.11
LIME1-208ENST00000493265 GEMIN2O14893 280 aaKnown RBP14.34□□□□□ -0.11
LIME1-208ENST00000493265 DEGS1O15121 323 aa14.34□□□□□ -0.11
LIME1-208ENST00000493265 SELLP14151 372 aa14.34□□□□□ -0.11
LIME1-208ENST00000493265 CFPP27918 469 aa14.34□□□□□ -0.11
LIME1-208ENST00000493265 RANBP1P43487 201 aa14.34□□□□□ -0.11
LIME1-208ENST00000493265 COL10A1Q03692 680 aa14.34□□□□□ -0.11
LIME1-208ENST00000493265 TMEM155Q4W5P6 130 aa14.34□□□□□ -0.11
LIME1-208ENST00000493265 SPIN3Q5JUX0 258 aa14.34□□□□□ -0.11
LIME1-208ENST00000493265 DCDC5Q6ZRR9 648 aa14.34□□□□□ -0.11
LIME1-208ENST00000493265 OR2W3Q7Z3T1 314 aa14.34□□□□□ -0.11
LIME1-208ENST00000493265 ASCC1Q8N9N2 400 aaKnown RBP14.34□□□□□ -0.11
LIME1-208ENST00000493265 MAPK1IP1LQ8NDC0 245 aa14.34□□□□□ -0.11
LIME1-208ENST00000493265 Q8NFD4 153 aa14.34□□□□□ -0.11
LIME1-208ENST00000493265 MDFIQ99750 246 aa14.34□□□□□ -0.11
LIME1-208ENST00000493265 NICN1Q9BSH3 213 aa14.34□□□□□ -0.11
LIME1-208ENST00000493265 BATF3Q9NR55 127 aa14.34□□□□□ -0.11
LIME1-208ENST00000493265 COMMD3Q9UBI1 195 aa14.34□□□□□ -0.11
LIME1-208ENST00000493265 HSPB6O14558 160 aa14.33□□□□□ -0.12
LIME1-208ENST00000493265 OR7C1O76099 320 aaPredicted RBP14.33□□□□□ -0.12
LIME1-208ENST00000493265 AMY2BP19961 511 aa14.33□□□□□ -0.12
LIME1-208ENST00000493265 USF1P22415 310 aaPredicted RBP14.33□□□□□ -0.12
LIME1-208ENST00000493265 RPS27AP62979 156 aaKnown RBP14.33□□□□□ -0.12
LIME1-208ENST00000493265 ZNF146Q15072 292 aa14.33□□□□□ -0.12
LIME1-208ENST00000493265 ATAD3CQ5T2N8 411 aa14.33□□□□□ -0.12
LIME1-208ENST00000493265 ZNRF1Q8ND25 227 aa14.33□□□□□ -0.12
LIME1-208ENST00000493265 TMEM185AQ8NFB2 350 aa14.33□□□□□ -0.12
LIME1-208ENST00000493265 Q96M66 194 aa14.33□□□□□ -0.12
LIME1-208ENST00000493265 GAFA1Q96PS6 74 aa14.33□□□□□ -0.12
LIME1-208ENST00000493265 REG4Q9BYZ8 158 aa14.33□□□□□ -0.12
LIME1-208ENST00000493265 ATG5Q9H1Y0 275 aa14.33□□□□□ -0.12
LIME1-208ENST00000493265 ZNF665Q9H7R5 613 aa14.33□□□□□ -0.12
LIME1-208ENST00000493265 ABRACLQ9P1F3 81 aa14.33□□□□□ -0.12
LIME1-208ENST00000493265 ZNF222Q9UK12 451 aa14.33□□□□□ -0.12
LIME1-208ENST00000493265 RAB22AQ9UL26 194 aa14.33□□□□□ -0.12
LIME1-208ENST00000493265 LDLRAD4O15165 306 aa14.32□□□□□ -0.12
LIME1-208ENST00000493265 NDUFA2O43678 99 aa14.32□□□□□ -0.12
LIME1-208ENST00000493265 OR2H2O95918 312 aa14.32□□□□□ -0.12
LIME1-208ENST00000493265 IL2RGP31785 369 aa14.32□□□□□ -0.12
LIME1-208ENST00000493265 VEGFCP49767 419 aa14.32□□□□□ -0.12
LIME1-208ENST00000493265 IL13RA1P78552 427 aa14.32□□□□□ -0.12
LIME1-208ENST00000493265 IL13RA2Q14627 380 aa14.32□□□□□ -0.12
LIME1-208ENST00000493265 Q6P435 159 aa14.32□□□□□ -0.12
LIME1-208ENST00000493265 BRICD5Q6PL45 260 aa14.32□□□□□ -0.12
LIME1-208ENST00000493265 ZNF788Q6ZQV5 615 aa14.32□□□□□ -0.12
LIME1-208ENST00000493265 SLC36A1Q7Z2H8 476 aa14.32□□□□□ -0.12
LIME1-208ENST00000493265 FGFRL1Q8N441 504 aa14.32□□□□□ -0.12
LIME1-208ENST00000493265 SAMD12Q8N8I0 201 aa14.32□□□□□ -0.12
LIME1-208ENST00000493265 OR8B3Q8NGG8 313 aa14.32□□□□□ -0.12
LIME1-208ENST00000493265 AP3S1Q92572 193 aa14.32□□□□□ -0.12
LIME1-208ENST00000493265 MRPS24Q96EL2 167 aaKnown RBP14.32□□□□□ -0.12
LIME1-208ENST00000493265 OR8B2Q96RD0 313 aa14.32□□□□□ -0.12
LIME1-208ENST00000493265 URM1Q9BTM9 101 aaKnown RBP14.32□□□□□ -0.12
LIME1-208ENST00000493265 CHST6Q9GZX3 395 aa14.32□□□□□ -0.12
LIME1-208ENST00000493265 LPAR5Q9H1C0 372 aa14.32□□□□□ -0.12
LIME1-208ENST00000493265 PATZ1Q9HBE1 687 aaKnown RBP14.32□□□□□ -0.12
LIME1-208ENST00000493265 ING3Q9NXR8 418 aa14.32□□□□□ -0.12
LIME1-208ENST00000493265 CCDC59Q9P031 241 aaKnown RBP14.32□□□□□ -0.12
LIME1-208ENST00000493265 CTSZQ9UBR2 303 aa14.32□□□□□ -0.12
LIME1-208ENST00000493265 MIOXQ9UGB7 285 aa14.32□□□□□ -0.12
LIME1-208ENST00000493265 ZANQ9Y493 2812 aa14.32□□□□□ -0.12
LIME1-208ENST00000493265 A0A0A6YYD4 124 aa14.31□□□□□ -0.12
LIME1-208ENST00000493265 TNFRSF13BO14836 293 aaPredicted RBP14.31□□□□□ -0.12
LIME1-208ENST00000493265 FSTL3O95633 263 aa14.31□□□□□ -0.12
LIME1-208ENST00000493265 IGHV2-5P01817 119 aa14.31□□□□□ -0.12
LIME1-208ENST00000493265 CHRM2P08172 466 aa14.31□□□□□ -0.12
LIME1-208ENST00000493265 CPT2P23786 658 aa14.31□□□□□ -0.12
LIME1-208ENST00000493265 SEC61A1P61619 476 aaKnown RBP14.31□□□□□ -0.12
LIME1-208ENST00000493265 NKAPLQ5M9Q1 402 aa14.31□□□□□ -0.12
LIME1-208ENST00000493265 NLRC3Q7RTR2 1065 aa14.31□□□□□ -0.12
LIME1-208ENST00000493265 ST8SIA4Q92187 359 aa14.31□□□□□ -0.12
LIME1-208ENST00000493265 NEIL1Q96FI4 390 aaPredicted RBP14.31□□□□□ -0.12
LIME1-208ENST00000493265 MED30Q96HR3 178 aa14.31□□□□□ -0.12
LIME1-208ENST00000493265 SPATA2Q9UM82 520 aa14.31□□□□□ -0.12
LIME1-208ENST00000493265 MAB21L2Q9Y586 359 aa14.31□□□□□ -0.12
LIME1-208ENST00000493265 ETV7Q9Y603 341 aa14.31□□□□□ -0.12
LIME1-208ENST00000493265 TMEM82A0PJX8 343 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 INAFM1C9JVW0 142 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 DVL1O14640 695 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 SIGLEC5O15389 551 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 SOCS1O15524 211 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 NDUFB3O43676 98 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 WNT2P09544 360 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 NDUFB7P17568 137 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 RAB6AP20340 208 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 PITPNBP48739 271 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 LMO4P61968 165 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 PAN3Q58A45 887 aaKnown RBP14.3□□□□□ -0.12
LIME1-208ENST00000493265 NHLRC3Q5JS37 347 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 ATPAF1Q5TC12 328 aaPredicted RBP14.3□□□□□ -0.12
LIME1-208ENST00000493265 MZT2AQ6P582 158 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 BPIFB2Q8N4F0 458 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 ZNF561Q8N587 486 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 DTX3Q8N9I9 347 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 NEK7Q8TDX7 302 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 ACOT12Q8WYK0 555 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 KCTD12Q96CX2 325 aaKnown RBP14.3□□□□□ -0.12
LIME1-208ENST00000493265 RAB39BQ96DA2 213 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 SDSLQ96GA7 329 aa14.3□□□□□ -0.12
LIME1-208ENST00000493265 CYYR1Q96J86 154 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms