RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 HOXA1P49639 335 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-219ENST00000491747 RAP1BP61224 184 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 RAP1AP62834 184 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 HGFACQ04756 655 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 PPP1R1AQ13522 171 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 NKPD1Q17RQ9 610 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 THEM4Q5T1C6 240 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 CATSPERDQ86XM0 798 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 OR13C3Q8NGS6 347 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 STOML3Q8TAV4 291 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 PIGTQ969N2 578 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 FOXN4Q96NZ1 517 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 NKX3-1Q99801 234 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-219ENST00000491747 BEX4Q9NWD9 120 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-219ENST00000491747 FBXO9Q9UK97 447 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-219ENST00000491747 EDARQ9UNE0 448 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 VSIG4Q9Y279 399 aa8.06□□□□□ -1.12
BRCA1-219ENST00000491747 MAP1AP78559 2803 aaPredicted RBP8.06□□□□□ -1.12
BRCA1-219ENST00000491747 IGHV2OR16-5A0A0B4J2B6 119 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 LOC390937A0A1W2PQ73 354 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 OVOL3O00110 214 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 GPR31O00270 319 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 PVALBP20472 110 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-219ENST00000491747 ARR3P36575 388 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 ZNF84P51523 738 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 MRPS34P82930 218 aaKnown RBP8.05□□□□□ -1.12
BRCA1-219ENST00000491747 GLO1Q04760 184 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 MFGE8Q08431 387 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-219ENST00000491747 SCRN3Q0VDG4 424 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 EIF2B1Q14232 305 aaKnown RBP8.05□□□□□ -1.12
BRCA1-219ENST00000491747 OTPQ5XKR4 325 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 FOXL2NBQ6ZUU3 175 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 PGAP1Q75T13 922 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 LURAP1LQ8IV03 231 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 PUSL1Q8N0Z8 303 aaKnown RBP8.05□□□□□ -1.12
BRCA1-219ENST00000491747 OR4S1Q8NGB4 309 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 AQP3Q92482 292 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 PPP1R14AQ96A00 147 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 ABHD6Q9BV23 337 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 CST11Q9H112 138 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 LRP12Q9Y561 859 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 PLCE1Q9P212 2302 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 SCGNO76038 276 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 ISG15P05161 165 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 MMP7P09237 267 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-219ENST00000491747 CTLA4P16410 223 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 VAMP1P23763 118 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 CDKN1AP38936 164 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 CYCSP99999 105 aaKnown RBP8.05□□□□□ -1.12
BRCA1-219ENST00000491747 SGCAQ16586 387 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 HFEQ30201 348 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 MOGAT2Q3SYC2 334 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 C1orf100Q5SVJ3 147 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 C11orf71Q6IPW1 123 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 UNQ6126/PRO20091Q6UXV3 157 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 SPNS3Q6ZMD2 512 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 BOLLQ8N9W6 283 aaKnown RBP8.05□□□□□ -1.12
BRCA1-219ENST00000491747 OR5AP2Q8NGF4 316 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 OR51A2Q8NGJ7 313 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 RNF141Q8WVD5 230 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 ARL11Q969Q4 196 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 FBXO17Q96EF6 278 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 PERPQ96FX8 193 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 CHMP1AQ9HD42 196 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-219ENST00000491747 MRPL22Q9NWU5 206 aaKnown RBP8.05□□□□□ -1.12
BRCA1-219ENST00000491747 VSX1Q9NZR4 365 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-219ENST00000491747 MBD2Q9UBB5 411 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 ATPIF1Q9UII2 106 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 RAB22AQ9UL26 194 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 R4GMQ9 66 aa8.05□□□□□ -1.12
BRCA1-219ENST00000491747 LOC100509620A0A075B734 347 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 IGLV1-36A0A0B4J1U3 117 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 ZNF98A6NK75 572 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 FGF16O43320 207 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 SMPD2O60906 423 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 DUS4LO95620 317 aaKnown RBP8.04□□□□□ -1.12
BRCA1-219ENST00000491747 CRYAAP02489 173 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 IFNA6P05013 189 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 TBPP20226 339 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 PSMB6P28072 239 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 CRABP1P29762 137 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 FABP6P51161 128 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 AKR1D1P51857 326 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 MST1LQ2TV78 715 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 NRN1LQ496H8 165 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 TMEM88Q6PEY1 159 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 SLC16A14Q7RTX9 510 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 TRAPPC6BQ86SZ2 158 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 DTX2Q86UW9 622 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 WFDC11Q8NEX6 87 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 TMEM171Q8WVE6 324 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 ZNF701Q9NV72 531 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-219ENST00000491747 GDF2Q9UK05 429 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-219ENST00000491747 LOC107986453A0A1B0GWG9 222 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 C5orf51A6NDU8 294 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 F8VVB4 439 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 F8VWA3 439 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 F8W036 122 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 NDUFS7O75251 213 aa8.04□□□□□ -1.12
BRCA1-219ENST00000491747 SNAPINO95295 136 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms