RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 RAB22AQ9UL26 194 aa11.38□□□□□ -0.59
CDK9-204ENST00000491521 SPATA2Q9UM82 520 aa11.38□□□□□ -0.59
CDK9-204ENST00000491521 ETV7Q9Y603 341 aa11.38□□□□□ -0.59
CDK9-204ENST00000491521 A0A075B6Q4 140 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 TMEM272A0A1B0GTI8 110 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 A0A1W2PP11 408 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 FAM25AB3EWG3 89 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 FAM25CB3EWG5 89 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 FAM25GB3EWG6 89 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 C3orf80F5H4A9 247 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 F8VVB4 439 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 F8VWA3 439 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 TMEM178BH3BS89 294 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 J3QLI3 93 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 IFNL4K9M1U5 179 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 CTDSP2O14595 271 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 HPGDSO60760 199 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 SFTPBP07988 381 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 ACAA1P09110 424 aaPredicted RBP11.37□□□□□ -0.59
CDK9-204ENST00000491521 PGA5P0DJD9 388 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 MGMTP16455 207 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 S100A5P33763 92 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 BMXP51813 675 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 DYNC1I2Q13409 638 aaKnown RBP11.37□□□□□ -0.59
CDK9-204ENST00000491521 FIP1L1Q6UN15 594 aaKnown RBP11.37□□□□□ -0.59
CDK9-204ENST00000491521 FAM58AQ8N1B3 248 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 TMEM104Q8NE00 496 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 OR51T1Q8NGJ9 327 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 NANPQ8TBE9 248 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 Q8TCH9 128 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 PHF21AQ96BD5 680 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 SLC6A7Q99884 636 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 NRIP2Q9BQI9 281 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 URM1Q9BTM9 101 aaKnown RBP11.37□□□□□ -0.59
CDK9-204ENST00000491521 ATG5Q9H1Y0 275 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 MMP26Q9NRE1 261 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 RBFOX1Q9NWB1 397 aaKnown RBP11.37□□□□□ -0.59
CDK9-204ENST00000491521 PTTG2Q9NZH5 202 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 IL36GQ9NZH8 169 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 DNAJB11Q9UBS4 358 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 NBEAL1Q6ZS30 2694 aa11.37□□□□□ -0.59
CDK9-204ENST00000491521 METTL21EPA6NDL7 271 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 TMEM14DPA8MWL7 114 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 NOS1APO75052 506 aaPredicted RBP11.36□□□□□ -0.59
CDK9-204ENST00000491521 FOXH1O75593 365 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 CLPXO76031 633 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 CD80P33681 288 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 CFHR2P36980 270 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 MDH2P40926 338 aaKnown RBP11.36□□□□□ -0.59
CDK9-204ENST00000491521 SCAND1P57086 179 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 ACTG1P63261 375 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 QRFPP83859 136 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 SCN1BQ07699 218 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 PLA2G7Q13093 441 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 FAM201AQ5SY85 155 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 SFRP4Q6FHJ7 346 aaPredicted RBP11.36□□□□□ -0.59
CDK9-204ENST00000491521 LRRC28Q86X40 367 aaPredicted RBP11.36□□□□□ -0.59
CDK9-204ENST00000491521 BPIFB2Q8N4F0 458 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 GCSAMQ8N6F7 178 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 TEX29Q8N6K0 151 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 C19orf18Q8NEA5 215 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 DEFB108BQ8NET1 73 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 MRPS24Q96EL2 167 aaKnown RBP11.36□□□□□ -0.59
CDK9-204ENST00000491521 C1orf147Q96MC9 270 aaPredicted RBP11.36□□□□□ -0.59
CDK9-204ENST00000491521 TMEM59Q9BXS4 323 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 NXF2Q9GZY0 626 aaKnown RBP11.36□□□□□ -0.59
CDK9-204ENST00000491521 WDR13Q9H1Z4 485 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 PATZ1Q9HBE1 687 aaKnown RBP11.36□□□□□ -0.59
CDK9-204ENST00000491521 RHOFQ9HBH0 211 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 HMG20AQ9NP66 347 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 RASL12Q9NYN1 266 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 OPN4Q9UHM6 478 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 GLS2Q9UI32 602 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 ADAM30Q9UKF2 790 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 ST3GAL6Q9Y274 331 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 PEX16Q9Y5Y5 336 aa11.36□□□□□ -0.59
CDK9-204ENST00000491521 IGHV3OR15-7A0A075B7D8 119 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 CEACAM18A8MTB9 384 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 SRRM5B3KS81 715 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 EGR1P18146 543 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 RAB6AP20340 208 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 GATA3P23771 443 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 GABRR1P24046 479 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 DUSP1P28562 367 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 PITPNBP48739 271 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 EFNB2P52799 333 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 FGF12P61328 243 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 ERVK11-1P61568 191 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 HOXA4Q00056 320 aaPredicted RBP11.35□□□□□ -0.59
CDK9-204ENST00000491521 UNC119Q13432 240 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 PDCD1Q15116 288 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 FAM189A2Q15884 450 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 ZNF181Q2M3W8 571 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 SMIM21Q3B7S5 101 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 PIGYQ3MUY2 71 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 TMEM155Q4W5P6 130 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 ESCO2Q56NI9 601 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 UBE2NLQ5JXB2 153 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 ELP2Q6IA86 826 aa11.35□□□□□ -0.59
CDK9-204ENST00000491521 METAP1DQ6UB28 335 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms