RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 NPRL3Q12980 569 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 SNTB2Q13425 540 aaKnown RBP2.15□□□□□ -2.07
PHC3-213ENST00000491258 SCARB2Q14108 478 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 SELPLGQ14242 412 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 TRIP10Q15642 601 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 HIST3H3Q16695 136 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 TRMT5Q32P41 509 aaKnown RBP2.15□□□□□ -2.07
PHC3-213ENST00000491258 AGKQ53H12 422 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 LIPNQ5VXI9 398 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 UGT2A3Q6UWM9 527 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 SLC35D2Q76EJ3 337 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 DPPA2Q7Z7J5 298 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 SNX32Q86XE0 403 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 CALHM3Q86XJ0 350 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 RBM45Q8IUH3 476 aaKnown RBP2.15□□□□□ -2.07
PHC3-213ENST00000491258 SKA3Q8IX90 412 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 SLC22A24Q8N4F4 322 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 C10orf53Q8N6V4 93 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 LRRC17Q8N6Y2 441 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 OR4D11Q8NGI4 311 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 OR6N1Q8NGY5 312 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 OR5J2Q8NH18 312 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 CLDND2Q8NHS1 167 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 C17orf50Q8WW18 174 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 RDH5Q92781 318 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 YIPF5Q969M3 257 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 FAM162AQ96A26 154 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 TAMM41Q96BW9 452 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 SLC25A44Q96H78 314 aaPredicted RBP2.15□□□□□ -2.07
PHC3-213ENST00000491258 ZNF607Q96SK3 696 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 CGREF1Q99674 301 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 MCHR1Q99705 422 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 SH3GL3Q99963 347 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 PRSS27Q9BQR3 290 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 TMEM43Q9BTV4 400 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 ZNF426Q9BUY5 554 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 ST6GALNAC5Q9BVH7 336 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 MRPL13Q9BYD1 178 aaKnown RBP2.15□□□□□ -2.07
PHC3-213ENST00000491258 ULBP2Q9BZM5 246 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 SLC19A3Q9BZV2 496 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 TPK1Q9H3S4 243 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 ZNF385DQ9H6B1 395 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 KAT8Q9H7Z6 458 aaKnown RBP2.15□□□□□ -2.07
PHC3-213ENST00000491258 DYNLRB1Q9NP97 96 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 MEPEQ9NQ76 525 aaPredicted RBP2.15□□□□□ -2.07
PHC3-213ENST00000491258 TMEM38BQ9NVV0 291 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 TREM2Q9NZC2 230 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 GLTPQ9NZD2 209 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 CCDC167Q9P0B6 97 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 MYEF2Q9P2K5 600 aaKnown RBP2.15□□□□□ -2.07
PHC3-213ENST00000491258 RABL2AQ9UBK7 228 aaPredicted RBP2.15□□□□□ -2.07
PHC3-213ENST00000491258 DIDO1Q9BTC0 2240 aaKnown RBP2.15□□□□□ -2.07
PHC3-213ENST00000491258 MAP1AP78559 2803 aaPredicted RBP2.15□□□□□ -2.07
PHC3-213ENST00000491258 TGP01266 2768 aa2.15□□□□□ -2.07
PHC3-213ENST00000491258 AKAP6Q13023 2319 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 GTF3C1Q12789 2109 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 MYO7BQ6PIF6 2116 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 ZNF106Q9H2Y7 1883 aaKnown RBP2.14□□□□□ -2.07
PHC3-213ENST00000491258 IGLV8-61A0A075B6I0 122 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 IGLV3-9A0A075B6K5 115 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 IGKV1D-43A0A0B4J1Z2 117 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 A0A1W2PRG6 482 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 TRAPPC13A5PLN9 417 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 CPSF4LA6NMK7 179 aaKnown RBP2.14□□□□□ -2.07
PHC3-213ENST00000491258 CENPBD1B2RD01 187 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 C11orf98E9PRG8 122 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 H0YHG0 523 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 M0R233 179 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 FXYD1O00168 92 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 PPIHO43447 177 aaKnown RBP2.14□□□□□ -2.07
PHC3-213ENST00000491258 RNF13O43567 381 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 TCF21O43680 179 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 CHP2O43745 196 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 MGRN1O60291 552 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 ENTPD5O75356 428 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 E2F6O75461 281 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 OR7A10O76100 309 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 GLCEO94923 617 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 UBL3O95164 117 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 FARS2O95363 451 aaKnown RBP2.14□□□□□ -2.07
PHC3-213ENST00000491258 SNAP29O95721 258 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 RAB36O95755 333 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 IGF2P01344 180 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 OPN1SWP03999 348 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 MSMBP08118 114 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 MMP7P09237 267 aaPredicted RBP2.14□□□□□ -2.07
PHC3-213ENST00000491258 TSPAN19P0C672 248 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 PGA4P0DJD7 388 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 PGA3P0DJD8 388 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 CCL2P13500 99 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 FUT1P19526 365 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 PCMT1P22061 227 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 SRP14P37108 136 aaKnown RBP2.14□□□□□ -2.07
PHC3-213ENST00000491258 AQP2P41181 271 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 CRYBB2P43320 205 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 GPR6P46095 362 aaPredicted RBP2.14□□□□□ -2.07
PHC3-213ENST00000491258 SLC7A2P52569 658 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 UGT2B15P54855 530 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 UCP2P55851 309 aa2.14□□□□□ -2.07
PHC3-213ENST00000491258 MTPNP58546 118 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms