RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 SLC2A9Q9NRM0 540 aa16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 VDAC3Q9Y277 283 aa16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 B3GALT1Q9Y5Z6 326 aa16.84■□□□□ 0.29
SNAPC3-206ENST00000490969 COL5A1P20908 1838 aaPredicted RBP16.83■□□□□ 0.28
SNAPC3-206ENST00000490969 DBHP09172 617 aa16.83■□□□□ 0.28
SNAPC3-206ENST00000490969 IL2RGP31785 369 aa16.83■□□□□ 0.28
SNAPC3-206ENST00000490969 PPM1FP49593 454 aaPredicted RBP16.83■□□□□ 0.28
SNAPC3-206ENST00000490969 ZNF133P52736 654 aaPredicted RBP16.83■□□□□ 0.28
SNAPC3-206ENST00000490969 HNRNPKP61978 463 aaKnown RBP eCLIP16.83■□□□□ 0.28
SNAPC3-206ENST00000490969 SHBQ15464 509 aa16.83■□□□□ 0.28
SNAPC3-206ENST00000490969 AKR1C8PQ5T2L2 129 aa16.83■□□□□ 0.28
SNAPC3-206ENST00000490969 SP5Q6BEB4 398 aaPredicted RBP16.83■□□□□ 0.28
SNAPC3-206ENST00000490969 LYZL4Q96KX0 146 aa16.83■□□□□ 0.28
SNAPC3-206ENST00000490969 LURAP1Q96LR2 239 aa16.83■□□□□ 0.28
SNAPC3-206ENST00000490969 HIST1H2BLQ99880 126 aa16.83■□□□□ 0.28
SNAPC3-206ENST00000490969 ALKBH4Q9NXW9 302 aa16.83■□□□□ 0.28
SNAPC3-206ENST00000490969 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.83■□□□□ 0.28
SNAPC3-206ENST00000490969 IGHV5-51A0A0C4DH38 117 aa16.83■□□□□ 0.28
SNAPC3-206ENST00000490969 SMCO3A2RU48 225 aa16.83■□□□□ 0.28
SNAPC3-206ENST00000490969 ANKUB1A6NFN9 424 aa16.83■□□□□ 0.28
SNAPC3-206ENST00000490969 BTF3P20290 206 aaKnown RBP16.83■□□□□ 0.28
SNAPC3-206ENST00000490969 OPRM1P35372 400 aa16.83■□□□□ 0.28
SNAPC3-206ENST00000490969 CAPZBP47756 277 aa16.83■□□□□ 0.28
SNAPC3-206ENST00000490969 DPPA2Q7Z7J5 298 aa16.83■□□□□ 0.28
SNAPC3-206ENST00000490969 ZNF441Q8N8Z8 693 aa16.83■□□□□ 0.28
SNAPC3-206ENST00000490969 CCDC187A0A096LP49 1063 aa16.82■□□□□ 0.28
SNAPC3-206ENST00000490969 A0A1W2PNV4 684 aa16.82■□□□□ 0.28
SNAPC3-206ENST00000490969 IGSF23A1L1A6 192 aa16.82■□□□□ 0.28
SNAPC3-206ENST00000490969 MKRN2OSH3BPM6 223 aa16.82■□□□□ 0.28
SNAPC3-206ENST00000490969 ATXN7O15265 892 aaPredicted RBP16.82■□□□□ 0.28
SNAPC3-206ENST00000490969 PITX3O75364 302 aa16.82■□□□□ 0.28
SNAPC3-206ENST00000490969 PGA4P0DJD7 388 aa16.82■□□□□ 0.28
SNAPC3-206ENST00000490969 PGA3P0DJD8 388 aa16.82■□□□□ 0.28
SNAPC3-206ENST00000490969 NSDHLQ15738 373 aa16.82■□□□□ 0.28
SNAPC3-206ENST00000490969 BEND4Q6ZU67 534 aa16.82■□□□□ 0.28
SNAPC3-206ENST00000490969 C1orf87Q8N0U7 546 aa16.82■□□□□ 0.28
SNAPC3-206ENST00000490969 MVB12AQ96EY5 273 aa16.82■□□□□ 0.28
SNAPC3-206ENST00000490969 PGAM5Q96HS1 289 aa16.82■□□□□ 0.28
SNAPC3-206ENST00000490969 FAAP24Q9BTP7 215 aa16.82■□□□□ 0.28
SNAPC3-206ENST00000490969 TTC28Q96AY4 2481 aa16.82■□□□□ 0.28
SNAPC3-206ENST00000490969 SHISA8B8ZZ34 492 aa16.81■□□□□ 0.28
SNAPC3-206ENST00000490969 IGHG1P01857 330 aa16.81■□□□□ 0.28
SNAPC3-206ENST00000490969 QDPRP09417 244 aa16.81■□□□□ 0.28
SNAPC3-206ENST00000490969 OR1D5P58170 312 aa16.81■□□□□ 0.28
SNAPC3-206ENST00000490969 HLA-DRB3P79483 266 aa16.81■□□□□ 0.28
SNAPC3-206ENST00000490969 ZXDAP98168 799 aa16.81■□□□□ 0.28
SNAPC3-206ENST00000490969 CFHR1Q03591 330 aa16.81■□□□□ 0.28
SNAPC3-206ENST00000490969 FOXF1Q12946 379 aa16.81■□□□□ 0.28
SNAPC3-206ENST00000490969 C4orf17Q53FE4 359 aa16.81■□□□□ 0.28
SNAPC3-206ENST00000490969 CARD17Q5XLA6 110 aa16.81■□□□□ 0.28
SNAPC3-206ENST00000490969 PRSS58Q8IYP2 241 aa16.81■□□□□ 0.28
SNAPC3-206ENST00000490969 OR1N1Q8NGS0 311 aa16.81■□□□□ 0.28
SNAPC3-206ENST00000490969 PIGTQ969N2 578 aa16.81■□□□□ 0.28
SNAPC3-206ENST00000490969 Q96M66 194 aa16.81■□□□□ 0.28
SNAPC3-206ENST00000490969 C11orf1Q9H5F2 150 aa16.81■□□□□ 0.28
SNAPC3-206ENST00000490969 FAHP16930 419 aa16.81■□□□□ 0.28
SNAPC3-206ENST00000490969 CDCP2Q5VXM1 449 aa16.81■□□□□ 0.28
SNAPC3-206ENST00000490969 MAML2Q8IZL2 1156 aaPredicted RBP16.81■□□□□ 0.28
SNAPC3-206ENST00000490969 CLDND2Q8NHS1 167 aa16.81■□□□□ 0.28
SNAPC3-206ENST00000490969 TMEM171Q8WVE6 324 aa16.81■□□□□ 0.28
SNAPC3-206ENST00000490969 HAS2Q92819 552 aa16.81■□□□□ 0.28
SNAPC3-206ENST00000490969 PHF1O43189 567 aaPredicted RBP16.8■□□□□ 0.28
SNAPC3-206ENST00000490969 HSPA12AO43301 675 aa16.8■□□□□ 0.28
SNAPC3-206ENST00000490969 OMGP23515 440 aa16.8■□□□□ 0.28
SNAPC3-206ENST00000490969 GRB2P62993 217 aaKnown RBP16.8■□□□□ 0.28
SNAPC3-206ENST00000490969 ZNF385CQ66K41 422 aaPredicted RBP16.8■□□□□ 0.28
SNAPC3-206ENST00000490969 UEVLDQ8IX04 471 aa16.8■□□□□ 0.28
SNAPC3-206ENST00000490969 SLC35G3Q8N808 338 aa16.8■□□□□ 0.28
SNAPC3-206ENST00000490969 OR11L1Q8NGX0 322 aa16.8■□□□□ 0.28
SNAPC3-206ENST00000490969 CRLF2Q9HC73 371 aa16.8■□□□□ 0.28
SNAPC3-206ENST00000490969 B4DEV8 164 aa16.8■□□□□ 0.28
SNAPC3-206ENST00000490969 C9J4A7 227 aa16.8■□□□□ 0.28
SNAPC3-206ENST00000490969 D2HGDHQ8N465 521 aa16.8■□□□□ 0.28
SNAPC3-206ENST00000490969 SNX22Q96L94 193 aa16.8■□□□□ 0.28
SNAPC3-206ENST00000490969 SLC7A11Q9UPY5 501 aa16.8■□□□□ 0.28
SNAPC3-206ENST00000490969 TP53TG5Q9Y2B4 290 aa16.8■□□□□ 0.28
SNAPC3-206ENST00000490969 VSTM2BA6NLU5 285 aa16.79■□□□□ 0.28
SNAPC3-206ENST00000490969 TGOLN2O43493 480 aa16.79■□□□□ 0.28
SNAPC3-206ENST00000490969 TDGF1P13385 188 aa16.79■□□□□ 0.28
SNAPC3-206ENST00000490969 RPL23AP62750 156 aaKnown RBP16.79■□□□□ 0.28
SNAPC3-206ENST00000490969 SLC25A47Q6Q0C1 308 aa16.79■□□□□ 0.28
SNAPC3-206ENST00000490969 PLPP5Q8NEB5 264 aa16.79■□□□□ 0.28
SNAPC3-206ENST00000490969 RCC1LQ96I51 464 aaKnown RBP16.79■□□□□ 0.28
SNAPC3-206ENST00000490969 SYT3Q9BQG1 590 aa16.79■□□□□ 0.28
SNAPC3-206ENST00000490969 PHOX2AO14813 284 aa16.79■□□□□ 0.28
SNAPC3-206ENST00000490969 IGLV3-1P01715 115 aa16.79■□□□□ 0.28
SNAPC3-206ENST00000490969 PGA5P0DJD9 388 aa16.79■□□□□ 0.28
SNAPC3-206ENST00000490969 C16orf47Q6ZP98 133 aaPredicted RBP16.79■□□□□ 0.28
SNAPC3-206ENST00000490969 CPEB2Q7Z5Q1 589 aaKnown RBP16.79■□□□□ 0.28
SNAPC3-206ENST00000490969 RBMXL1Q96E39 390 aaKnown RBP16.79■□□□□ 0.28
SNAPC3-206ENST00000490969 FAM86C1Q9NVL1 165 aa16.79■□□□□ 0.28
SNAPC3-206ENST00000490969 A0A087WZY1 265 aa16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 DHRS3O75911 302 aa16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 ONECUT2O95948 504 aa16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 MEX3BQ6ZN04 569 aaKnown RBP16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 P4HA3Q7Z4N8 544 aa16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 DTX1Q86Y01 620 aa16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 PP6455Q8WZ26 134 aa16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 NEU1Q99519 415 aa16.78■□□□□ 0.28
SNAPC3-206ENST00000490969 ANGPTL4Q9BY76 406 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms