RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 Q6ZTK2 550 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 CCDC190Q86UF4 302 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 TGIF2LYQ8IUE0 185 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 FAM168AQ92567 244 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 RAB3CQ96E17 227 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 NICN1Q9BSH3 213 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 FAM234AQ9H0X4 552 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 TMEM165Q9HC07 324 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 PLEKHJ1Q9NW61 149 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 DCAF16Q9NXF7 216 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 KAAG1Q9UBP8 84 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 ZNF222Q9UK12 451 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 CACNA1DQ01668 2161 aa11.09□□□□□ -0.63
SNX12-205ENST00000490561 HRNRQ86YZ3 2850 aaPredicted RBP11.08□□□□□ -0.64
SNX12-205ENST00000490561 IGKV1D-17A0A075B6S4 117 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 IGHV3OR15-7A0A075B7D8 119 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 A0A0A6YYD4 124 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 ISPDA4D126 451 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 FOXI3A8MTJ6 420 aaPredicted RBP11.08□□□□□ -0.64
SNX12-205ENST00000490561 SERPINE3A8MV23 424 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 MCRIP1C9JLW8 97 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 CA11O75493 328 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 LY6HO94772 140 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 OR2H2O95918 312 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 HIST1H1DP16402 221 aaKnown RBP11.08□□□□□ -0.64
SNX12-205ENST00000490561 CHATP28329 748 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 GABRA2P47869 451 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 IL13RA1P78552 427 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 MRPS10P82664 201 aaKnown RBP11.08□□□□□ -0.64
SNX12-205ENST00000490561 SCN1BQ07699 218 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 PNLIPRP3Q17RR3 467 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 NKAPLQ5M9Q1 402 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 FAM201AQ5SY85 155 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 ATAD3CQ5T2N8 411 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 SHEQ5VZ18 495 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 PYHIN1Q6K0P9 492 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 PRSS57Q6UWY2 283 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 ZNF788Q6ZQV5 615 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 ZNF525Q8N782 197 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 DEFB108BQ8NET1 73 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 OR4M1Q8NGD0 313 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 OR5D13Q8NGL4 314 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 SNX22Q96L94 193 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.08□□□□□ -0.64
SNX12-205ENST00000490561 IL36RNQ9UBH0 155 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 MIOXQ9UGB7 285 aa11.08□□□□□ -0.64
SNX12-205ENST00000490561 CHD3Q12873 2000 aaKnown RBP11.08□□□□□ -0.64
SNX12-205ENST00000490561 TRAV18A0A075B6X5 111 aa11.07□□□□□ -0.64
SNX12-205ENST00000490561 FUOMA2VDF0 154 aa11.07□□□□□ -0.64
SNX12-205ENST00000490561 FABP12A6NFH5 140 aa11.07□□□□□ -0.64
SNX12-205ENST00000490561 POM121CA8CG34 1229 aa11.07□□□□□ -0.64
SNX12-205ENST00000490561 H7C1Q1 480 aa11.07□□□□□ -0.64
SNX12-205ENST00000490561 SIRPB1O00241 398 aa11.07□□□□□ -0.64
SNX12-205ENST00000490561 SLC33A1O00400 549 aaPredicted RBP11.07□□□□□ -0.64
SNX12-205ENST00000490561 SIGLEC5O15389 551 aa11.07□□□□□ -0.64
SNX12-205ENST00000490561 SOCS1O15524 211 aa11.07□□□□□ -0.64
SNX12-205ENST00000490561 GYPAP02724 150 aa11.07□□□□□ -0.64
SNX12-205ENST00000490561 SLC25A16P16260 332 aa11.07□□□□□ -0.64
SNX12-205ENST00000490561 DUSP1P28562 367 aa11.07□□□□□ -0.64
SNX12-205ENST00000490561 TAS2R20P59543 309 aa11.07□□□□□ -0.64
SNX12-205ENST00000490561 MRPS15P82914 257 aaKnown RBP11.07□□□□□ -0.64
SNX12-205ENST00000490561 ZNF45Q02386 682 aa11.07□□□□□ -0.64
SNX12-205ENST00000490561 COL10A1Q03692 680 aa11.07□□□□□ -0.64
SNX12-205ENST00000490561 PAN3Q58A45 887 aaKnown RBP11.07□□□□□ -0.64
SNX12-205ENST00000490561 NLRC3Q7RTR2 1065 aa11.07□□□□□ -0.64
SNX12-205ENST00000490561 CD177Q8N6Q3 437 aa11.07□□□□□ -0.64
SNX12-205ENST00000490561 SUMF2Q8NBJ7 301 aa11.07□□□□□ -0.64
SNX12-205ENST00000490561 NEK7Q8TDX7 302 aa11.07□□□□□ -0.64
SNX12-205ENST00000490561 C10orf105Q8TEF2 133 aa11.07□□□□□ -0.64
SNX12-205ENST00000490561 ARHGAP5-AS1Q96IT6 56 aa11.07□□□□□ -0.64
SNX12-205ENST00000490561 TMEM246Q9BRR3 403 aa11.07□□□□□ -0.64
SNX12-205ENST00000490561 DPCDQ9BVM2 203 aaPredicted RBP11.07□□□□□ -0.64
SNX12-205ENST00000490561 PECRQ9BY49 303 aa11.07□□□□□ -0.64
SNX12-205ENST00000490561 RIMS4Q9H426 269 aaPredicted RBP11.07□□□□□ -0.64
SNX12-205ENST00000490561 TRAV24A0A0B4J272 114 aa11.06□□□□□ -0.64
SNX12-205ENST00000490561 MFNGO00587 321 aa11.06□□□□□ -0.64
SNX12-205ENST00000490561 TNFRSF13BO14836 293 aaPredicted RBP11.06□□□□□ -0.64
SNX12-205ENST00000490561 GPR37O15354 613 aa11.06□□□□□ -0.64
SNX12-205ENST00000490561 ADAM20O43506 726 aa11.06□□□□□ -0.64
SNX12-205ENST00000490561 ZNF205O95201 554 aa11.06□□□□□ -0.64
SNX12-205ENST00000490561 CSN2P05814 226 aa11.06□□□□□ -0.64
SNX12-205ENST00000490561 HEXAP06865 529 aa11.06□□□□□ -0.64
SNX12-205ENST00000490561 NPY4RP50391 375 aa11.06□□□□□ -0.64
SNX12-205ENST00000490561 TMEM50BP56557 158 aa11.06□□□□□ -0.64
SNX12-205ENST00000490561 PAX5Q02548 391 aa11.06□□□□□ -0.64
SNX12-205ENST00000490561 IL18Q14116 193 aa11.06□□□□□ -0.64
SNX12-205ENST00000490561 C11orf91Q3C1V1 193 aa11.06□□□□□ -0.64
SNX12-205ENST00000490561 MOGAT2Q3SYC2 334 aa11.06□□□□□ -0.64
SNX12-205ENST00000490561 CDNFQ49AH0 187 aa11.06□□□□□ -0.64
SNX12-205ENST00000490561 LRRC10Q5BKY1 277 aa11.06□□□□□ -0.64
SNX12-205ENST00000490561 AVPI1Q5T686 147 aa11.06□□□□□ -0.64
SNX12-205ENST00000490561 SIGIRRQ6IA17 410 aa11.06□□□□□ -0.64
SNX12-205ENST00000490561 FAM131AQ6UXB0 335 aa11.06□□□□□ -0.64
SNX12-205ENST00000490561 DNM1P46Q6ZS02 220 aa11.06□□□□□ -0.64
SNX12-205ENST00000490561 BIVMQ86UB2 503 aa11.06□□□□□ -0.64
SNX12-205ENST00000490561 ASCC1Q8N9N2 400 aaKnown RBP11.06□□□□□ -0.64
SNX12-205ENST00000490561 C19orf18Q8NEA5 215 aa11.06□□□□□ -0.64
SNX12-205ENST00000490561 OR5T2Q8NGG2 359 aa11.06□□□□□ -0.64
SNX12-205ENST00000490561 SEH1LQ96EE3 360 aa11.06□□□□□ -0.64
SNX12-205ENST00000490561 GAFA1Q96PS6 74 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms