RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 IGKV1-9A0A0C4DH69 117 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 A0A1B0GW55 424 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 OR2AT4A6NND4 320 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 OGG1O15527 345 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 FCN3O75636 299 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 DUX4L2P0CJ85 424 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 DUX4L3P0CJ86 424 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 DUX4L4P0CJ87 422 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 DUX4L5P0CJ88 424 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 DUX4L6P0CJ89 424 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 DUX4L7P0CJ90 424 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 ZNF20P17024 532 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 NDUFB7P17568 137 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 AMY2BP19961 511 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 FUT6P51993 359 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 MRPL28Q13084 256 aaKnown RBP8.49□□□□□ -1.05
TTC28-207ENST00000490475 DOC2BQ14184 412 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 TRIM16LQ309B1 348 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 SMIM21Q3B7S5 101 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 DUX4L9Q6RFH8 374 aaPredicted RBP8.49□□□□□ -1.05
TTC28-207ENST00000490475 LIAT1Q6ZQX7 453 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 SLC16A12Q6ZSM3 486 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 RNF144BQ7Z419 303 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 ZNF573Q86YE8 665 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 CALHM1Q8IU99 346 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 FGFRL1Q8N441 504 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 PIP4P2Q8N4L2 257 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 ZFP41Q8N8Y5 198 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 ZNF485Q8NCK3 441 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 ANGPTL6Q8NI99 470 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 PP6455Q8WZ26 134 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 RGP1Q92546 391 aaPredicted RBP8.49□□□□□ -1.05
TTC28-207ENST00000490475 YIPF6Q96EC8 236 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 CHST5Q9GZS9 411 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 HEXA-AS1Q9H8Q6 139 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 SIRT7Q9NRC8 400 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 DUX4Q9UBX2 424 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 POLDIP2Q9Y2S7 368 aa8.49□□□□□ -1.05
TTC28-207ENST00000490475 MEIOCA2RUB1 952 aa8.48□□□□□ -1.05
TTC28-207ENST00000490475 TMEM212A6NML5 194 aa8.48□□□□□ -1.05
TTC28-207ENST00000490475 RNASEK-C17orf49H0YIS7 233 aa8.48□□□□□ -1.05
TTC28-207ENST00000490475 RGS10O43665 173 aa8.48□□□□□ -1.05
TTC28-207ENST00000490475 GATBO75879 557 aaKnown RBP8.48□□□□□ -1.05
TTC28-207ENST00000490475 ATF1P18846 271 aa8.48□□□□□ -1.05
TTC28-207ENST00000490475 SAA4P35542 130 aa8.48□□□□□ -1.05
TTC28-207ENST00000490475 GABRA2P47869 451 aa8.48□□□□□ -1.05
TTC28-207ENST00000490475 SOX2P48431 317 aa8.48□□□□□ -1.05
TTC28-207ENST00000490475 EMX1Q04741 257 aaPredicted RBP8.48□□□□□ -1.05
TTC28-207ENST00000490475 CBX3Q13185 183 aa8.48□□□□□ -1.05
TTC28-207ENST00000490475 CDK5R1Q15078 307 aa8.48□□□□□ -1.05
TTC28-207ENST00000490475 CCDC58Q4VC31 144 aa8.48□□□□□ -1.05
TTC28-207ENST00000490475 UBE2UQ5VVX9 321 aa8.48□□□□□ -1.05
TTC28-207ENST00000490475 ZNF561Q8N587 486 aa8.48□□□□□ -1.05
TTC28-207ENST00000490475 NANOGP1Q8N7R0 232 aa8.48□□□□□ -1.05
TTC28-207ENST00000490475 BEND2Q8NDZ0 799 aa8.48□□□□□ -1.05
TTC28-207ENST00000490475 OR52N1Q8NH53 320 aa8.48□□□□□ -1.05
TTC28-207ENST00000490475 GHSRQ92847 366 aa8.48□□□□□ -1.05
TTC28-207ENST00000490475 C10orf35Q96D05 121 aa8.48□□□□□ -1.05
TTC28-207ENST00000490475 GAFA1Q96PS6 74 aa8.48□□□□□ -1.05
TTC28-207ENST00000490475 COMMD4Q9H0A8 199 aa8.48□□□□□ -1.05
TTC28-207ENST00000490475 RANBP3Q9H6Z4 567 aaPredicted RBP8.48□□□□□ -1.05
TTC28-207ENST00000490475 FBLN5Q9UBX5 448 aa8.48□□□□□ -1.05
TTC28-207ENST00000490475 TGP01266 2768 aa8.48□□□□□ -1.05
TTC28-207ENST00000490475 VWFP04275 2813 aa8.48□□□□□ -1.05
TTC28-207ENST00000490475 hCG_2014768A0A024R1R8 64 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 IGKV1D-17A0A075B6S4 117 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 A0A0G2JK05 382 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 PNMA8CA0A1B0GUJ8 204 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 F8VVB4 439 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 F8VWA3 439 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 J3QT63 122 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 CDK1P06493 297 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 PGA5P0DJD9 388 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 PSG2P11465 335 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 MPZP25189 248 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 PPP5CP53041 499 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 ATP1B3P54709 279 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 GP2P55259 537 aaKnown RBP8.47□□□□□ -1.05
TTC28-207ENST00000490475 MTCP1P56278 107 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 TBCEQ15813 527 aaPredicted RBP8.47□□□□□ -1.05
TTC28-207ENST00000490475 DMKNQ6E0U4 476 aaPredicted RBP8.47□□□□□ -1.05
TTC28-207ENST00000490475 ASPHD2Q6ICH7 369 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 Q6ZSV7 163 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 Q6ZTK2 550 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 UTS2BQ765I0 119 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 PDZD9Q8IXQ8 264 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 Q8N7P7 452 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 POC1AQ8NBT0 407 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 TMEM185AQ8NFB2 350 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 OR6Q1Q8NGQ2 317 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 OR13C9Q8NGT0 318 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 DYNC2LI1Q8TCX1 351 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 RPS4Y2Q8TD47 263 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 HAVCR2Q8TDQ0 301 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 TSEN15Q8WW01 171 aaKnown RBP8.47□□□□□ -1.05
TTC28-207ENST00000490475 TNFRSF14Q92956 283 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 MYDGFQ969H8 173 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 BORCS8Q96FH0 119 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 SDSLQ96GA7 329 aa8.47□□□□□ -1.05
TTC28-207ENST00000490475 SPACA5Q96QH8 159 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms