RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 C17orf58Q2M2W7 97 aa9.5□□□□□ -0.89
SRSF4-204ENST00000489898 TMEM95Q3KNT9 176 aa9.5□□□□□ -0.89
SRSF4-204ENST00000489898 PDLIM3Q53GG5 364 aaPredicted RBP9.5□□□□□ -0.89
SRSF4-204ENST00000489898 SPIN3Q5JUX0 258 aa9.5□□□□□ -0.89
SRSF4-204ENST00000489898 TMEM244Q5VVB8 128 aa9.5□□□□□ -0.89
SRSF4-204ENST00000489898 FAM220AQ7Z4H9 259 aa9.5□□□□□ -0.89
SRSF4-204ENST00000489898 LHFPL3Q86UP9 236 aa9.5□□□□□ -0.89
SRSF4-204ENST00000489898 FAM58AQ8N1B3 248 aa9.5□□□□□ -0.89
SRSF4-204ENST00000489898 ZNF714Q96N38 554 aa9.5□□□□□ -0.89
SRSF4-204ENST00000489898 WNT10AQ9GZT5 417 aa9.5□□□□□ -0.89
SRSF4-204ENST00000489898 PPIL3Q9H2H8 161 aaKnown RBP9.5□□□□□ -0.89
SRSF4-204ENST00000489898 FGF20Q9NP95 211 aaPredicted RBP9.5□□□□□ -0.89
SRSF4-204ENST00000489898 HHLA2Q9UM44 414 aa9.5□□□□□ -0.89
SRSF4-204ENST00000489898 CAB39Q9Y376 341 aaPredicted RBP9.5□□□□□ -0.89
SRSF4-204ENST00000489898 TBL2Q9Y4P3 447 aaKnown RBP9.5□□□□□ -0.89
SRSF4-204ENST00000489898 DNAH7Q8WXX0 4024 aa9.5□□□□□ -0.89
SRSF4-204ENST00000489898 DAPL1A0PJW8 107 aa9.49□□□□□ -0.89
SRSF4-204ENST00000489898 SLC33A1O00400 549 aaPredicted RBP9.49□□□□□ -0.89
SRSF4-204ENST00000489898 GABRPO00591 440 aa9.49□□□□□ -0.89
SRSF4-204ENST00000489898 ALX3O95076 343 aa9.49□□□□□ -0.89
SRSF4-204ENST00000489898 CLIC3O95833 236 aa9.49□□□□□ -0.89
SRSF4-204ENST00000489898 PAHP00439 452 aa9.49□□□□□ -0.89
SRSF4-204ENST00000489898 CRYBA1P05813 215 aa9.49□□□□□ -0.89
SRSF4-204ENST00000489898 HTR1AP08908 422 aa9.49□□□□□ -0.89
SRSF4-204ENST00000489898 CD34P28906 385 aa9.49□□□□□ -0.89
SRSF4-204ENST00000489898 ERP29P30040 261 aaKnown RBP9.49□□□□□ -0.89
SRSF4-204ENST00000489898 RPS11P62280 158 aaKnown RBP eCLIP9.49□□□□□ -0.89
SRSF4-204ENST00000489898 ACTA2P62736 377 aa9.49□□□□□ -0.89
SRSF4-204ENST00000489898 ACTG2P63267 376 aa9.49□□□□□ -0.89
SRSF4-204ENST00000489898 DEFA6Q01524 100 aa9.49□□□□□ -0.89
SRSF4-204ENST00000489898 EDDM3AQ14507 147 aa9.49□□□□□ -0.89
SRSF4-204ENST00000489898 LHFPL2Q6ZUX7 228 aa9.49□□□□□ -0.89
SRSF4-204ENST00000489898 KCTD20Q7Z5Y7 419 aa9.49□□□□□ -0.89
SRSF4-204ENST00000489898 TMEM219Q86XT9 240 aa9.49□□□□□ -0.89
SRSF4-204ENST00000489898 LYPD6Q86Y78 171 aa9.49□□□□□ -0.89
SRSF4-204ENST00000489898 EGFL6Q8IUX8 553 aa9.49□□□□□ -0.89
SRSF4-204ENST00000489898 Q8IYB0 196 aa9.49□□□□□ -0.89
SRSF4-204ENST00000489898 DCLRE1BQ9H816 532 aa9.49□□□□□ -0.89
SRSF4-204ENST00000489898 ZNF286AQ9HBT8 521 aa9.49□□□□□ -0.89
SRSF4-204ENST00000489898 SLC7A11Q9UPY5 501 aa9.49□□□□□ -0.89
SRSF4-204ENST00000489898 GMPPBQ9Y5P6 360 aa9.49□□□□□ -0.89
SRSF4-204ENST00000489898 A0A087X0M5 115 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 TRAV24A0A0B4J272 114 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 LOC100130705A0A1B0GUX0 176 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 A0A1B0GX30 115 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 LY6LH3BQJ8 138 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 J3QLW9 94 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 SIRPB1O00241 398 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 AMY1AP04745 511 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 AMY2AP04746 511 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 ZNF19P17023 458 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 PRKACAP17612 351 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 GABRA5P31644 462 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 GLIPR1P48060 266 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 ETV1P50549 477 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 SNU13P55769 128 aaKnown RBP9.48□□□□□ -0.89
SRSF4-204ENST00000489898 MTCP1P56278 107 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 EDDM3BP56851 147 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 PAX5Q02548 391 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 RAB40BQ12829 278 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 BLMHQ13867 455 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 GRK1Q15835 563 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 PLA1AQ53H76 456 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 KPRPQ5T749 579 aaPredicted RBP9.48□□□□□ -0.89
SRSF4-204ENST00000489898 PRAMEF5Q5TYX0 476 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 ZNF691Q5VV52 312 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 ASCL4Q6XD76 172 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 SAXO1Q8IYX7 474 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 KLHDC1Q8N7A1 406 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 OR13C3Q8NGS6 347 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 OR13C5Q8NGS8 318 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 CNIH3Q8TBE1 160 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 CORO2AQ92828 525 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 ORAI1Q96D31 301 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 PGLYRP3Q96LB9 341 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 C9orf16Q9BUW7 83 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 CDCA4Q9BXL8 241 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 TMEM133Q9H2Q1 129 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 SESN1Q9Y6P5 492 aa9.48□□□□□ -0.89
SRSF4-204ENST00000489898 A0A0G2JK05 382 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 FAM172BPA6NC97 362 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 M0QZ24 198 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 MGST3O14880 152 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 SULT1B1O43704 296 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 ARG1P05089 322 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 PRKACBP22694 351 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 PEX2P28328 305 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 ATP1B3P54709 279 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 ADARB1P78563 741 aaKnown RBP9.47□□□□□ -0.89
SRSF4-204ENST00000489898 RCN1Q15293 331 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 KISS1Q15726 138 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 OR2G6Q5TZ20 316 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 ELP2Q6IA86 826 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 HEPN1Q6WQI6 88 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 LIAT1Q6ZQX7 453 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 GDPD3Q7L5L3 318 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 OR51T1Q8NGJ9 327 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 PLPPR1Q8TBJ4 325 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 FBLIM1Q8WUP2 373 aa9.47□□□□□ -0.89
SRSF4-204ENST00000489898 FOXRED1Q96CU9 486 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms