RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 THADAQ6YHU6 1953 aa1.92□□□□□ -2.1
HMGB1P36-201ENST00000487709 SHANK1Q9Y566 2161 aa1.92□□□□□ -2.1
HMGB1P36-201ENST00000487709 MYO3BQ8WXR4 1341 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 IGKV1-6A0A0C4DH72 117 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 KIR2DS1A0A191URI9 304 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 COX7A2P2O60397 106 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 CST4P01036 141 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 SEC11BP0C7V7 166 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 GIMD1P0DJR0 217 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 ELK4P28324 431 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 CD34P28906 385 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 CD40LGP29965 261 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 DNASE1L1P49184 302 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 VSNL1P62760 191 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 UBE2IP63279 158 aaKnown RBP1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 BNIP2Q12982 314 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 FAM53BQ14153 422 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 ZNF235Q14590 738 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 NDUFAF6Q330K2 333 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 DEFB134Q4QY38 66 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 CLEC12AQ5QGZ9 265 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 ZNF470Q6ECI4 717 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 ZNF773Q6PK81 442 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 BRD3OSQ6XYD6 125 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 SSX6Q7RTT6 188 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 TMEM144Q7Z5S9 345 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 SETD3Q86TU7 594 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 PLCZ1Q86YW0 608 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 SELENOHQ8IZQ5 122 aaKnown RBP1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 DNAAF3Q8N9W5 541 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 OR4K2Q8NGD2 314 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 LGALS14Q8TCE9 139 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 GTF2H4Q92759 462 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 TNFRSF14Q92956 283 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 OTUB2Q96DC9 234 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 C8orf76Q96K31 380 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 C20orf144Q9BQM9 153 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 SHCBP1LQ9BZQ2 653 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 C12orf4Q9NQ89 552 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 DIABLOQ9NR28 239 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 CA10Q9NS85 328 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 MS4A12Q9NXJ0 267 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 ZNF492Q9P255 531 aa1.91□□□□□ -2.1
HMGB1P36-201ENST00000487709 C1orf232A0A0U1RR37 186 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 SLC5A10A0PJK1 596 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 MGAT4DA6NG13 374 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 VGLL3A8MV65 326 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 RNASEK-C17orf49H0YIS7 233 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 SYNGR2O43760 224 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 ZMPSTE24O75844 475 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 IGKV1D-16P01601 117 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 RLN2P04090 185 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 OCMP0CE72 109 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 INAFM2P0DMQ5 153 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 PRTN3P24158 256 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 XKP51811 444 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 BLVRAP53004 296 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 FMODQ06828 376 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 STX4Q12846 297 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 PMS2P3Q13401 168 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 SSX1Q16384 188 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 PTRHD1Q6GMV3 140 aaKnown RBP1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 OR4C13Q8NGP0 309 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 SPACA5Q96QH8 159 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 CIB1Q99828 191 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 APOL4Q9BPW4 351 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 ANAPC13Q9BS18 74 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 RHOFQ9HBH0 211 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 SND1-IT1Q9HBX3 110 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 FAM60AQ9NP50 221 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 MRM2Q9UI43 246 aaKnown RBP1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 PSMD13Q9UNM6 376 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 SLC22A14Q9Y267 594 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 POFUT2Q9Y2G5 429 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 DYSFO75923 2080 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 ZBED9Q6R2W3 1325 aa1.9□□□□□ -2.11
HMGB1P36-201ENST00000487709 LRPPRCP42704 1394 aaKnown RBP1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 A0A1B0GTI1 187 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 LOC389332A0A1B0GUA5 103 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 GOLGA8IPA6NC78 632 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 OR2AT4A6NND4 320 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 IGLL5B9A064 214 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 F8VZ95 297 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 GOLGA8RI6L899 631 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 UPK1AO00322 258 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 TOR1AO14656 332 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 SCN2BO60939 215 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 NDUFS6O75380 124 aaKnown RBP1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 SC5DO75845 299 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 DHRS3O75911 302 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 LDOC1O95751 146 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 ZNF35P13682 527 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 PRPS1L1P21108 318 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 SYT1P21579 422 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 PSMB6P28072 239 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 TEAD1P28347 426 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 IMPA1P29218 277 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 UGT2B10P36537 528 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 P2RY2P41231 377 aa1.89□□□□□ -2.11
HMGB1P36-201ENST00000487709 PLTPP55058 493 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms