RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 LRRC39Q96DD0 335 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 CNBD2Q96M20 576 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 TCEAL7Q9BRU2 100 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 KIFC1Q9BW19 673 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 NUDT9Q9BW91 350 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 OSBPL11Q9BXB4 747 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 CCDC90BQ9GZT6 254 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 FAM96AQ9H5X1 160 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 XKR8Q9H6D3 395 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 UCK1Q9HA47 277 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 SDHAF3Q9NRP4 125 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 CD300AQ9UGN4 299 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 GUCA1BQ9UMX6 200 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 SNX12Q9UMY4 172 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 ERGIC3Q9Y282 383 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 HEY1Q9Y5J3 304 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 KPTNQ9Y664 436 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 ABCC5O15440 1437 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 NSD3Q9BZ95 1437 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 PCF11O94913 1555 aaKnown RBP1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 INO80Q9ULG1 1556 aaPredicted RBP1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 LRRIQ1Q96JM4 1722 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 ADCY9O60503 1353 aa1.97□□□□□ -2.09
SNRNP27-204ENST00000487029 ZNF532Q9HCE3 1301 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 MYH11P35749 1972 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 CDK12Q9NYV4 1490 aaPredicted RBP1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 TRPM1Q7Z4N2 1603 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 A0A087WXM4 84 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 IGHV1-3A0A0C4DH29 117 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 A0A0J9YYE9 177 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 OR5K4A6NMS3 321 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 DFFAO00273 331 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 CCRL2O00421 344 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 MYL12BO14950 172 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 AQP9O43315 295 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 GMDSO60547 372 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 NIPSNAP2O75323 286 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 ETHE1O95571 254 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 IGLV2-8P01709 118 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 TRBC1P01850 177 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 HOXB8P17481 243 aaPredicted RBP1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 IVDP26440 423 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 PSMB5P28074 263 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 NUP62P37198 522 aaPredicted RBP1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 RAB25P57735 213 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 PSMC5P62195 406 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 POLR2GP62487 172 aaKnown RBP eCLIP1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 FLI1Q01543 452 aaPredicted RBP1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 C2orf54Q08AI8 447 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 INCA1Q0VD86 236 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 STX5Q13190 355 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 ALX1Q15699 326 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 KCNJ8Q15842 424 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 DNLZQ5SXM8 178 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 PDPK2PQ6A1A2 396 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 KDM4DQ6B0I6 523 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 FAM173BQ6P4H8 233 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 SLC25A34Q6PIV7 304 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 IZUMO2Q6UXV1 221 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 LRRC6Q86X45 466 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 LRRC34Q8IZ02 419 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 ZNF101Q8IZC7 436 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 SYCE1Q8N0S2 351 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 NATD1Q8N6N6 113 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 CCNYL1Q8N7R7 359 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 TMEM105Q8N8V8 129 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 ST20-AS1Q8NBB2 130 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 OR6K6Q8NGW6 343 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 OR1S1Q8NH92 325 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 TFGQ92734 400 aaPredicted RBP1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 CMTM5Q96DZ9 223 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 SMARCD1Q96GM5 515 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 MSANTD3Q96H12 275 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 PPP3R2Q96LZ3 170 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 SERPINI1Q99574 410 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 APOL4Q9BPW4 351 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 TMEM175Q9BSA9 504 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 PDCD10Q9BUL8 212 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 C9orf16Q9BUW7 83 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 SCRT1Q9BWW7 348 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 ARV1Q9H2C2 271 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 KIR3DX1Q9H7L2 352 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 ANKHQ9HCJ1 492 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 HEBP1Q9NRV9 189 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 PAQR5Q9NXK6 330 aaPredicted RBP1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 ZNF229Q9UJW7 825 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 NDRG2Q9UN36 371 aaKnown RBP1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 FARSAQ9Y285 508 aaKnown RBP1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 AP3M1Q9Y2T2 418 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 V9GYQ6 96 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 BCL9O00512 1426 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 ZFYVE9O95405 1425 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 HECW2Q9P2P5 1572 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 MAST1Q9Y2H9 1570 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 ARHGEF10O15013 1369 aa1.96□□□□□ -2.1
SNRNP27-204ENST00000487029 MYH7BA7E2Y1 1941 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 MYH8P13535 1937 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 CC2D2AQ9P2K1 1620 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 CHD1O14646 1710 aa1.95□□□□□ -2.1
SNRNP27-204ENST00000487029 SETD1AO15047 1707 aaKnown RBP1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms