RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 DUX4L5P0CJ88 424 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 DUX4L6P0CJ89 424 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 DUX4L7P0CJ90 424 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 SERPINB10P48595 397 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 CLDN12P56749 244 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 VBP1P61758 197 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 MPV17LQ2QL34 196 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 NHLRC3Q5JS37 347 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 ATAD3CQ5T2N8 411 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 DCAF12L2Q5VW00 463 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 DUX4L9Q6RFH8 374 aaPredicted RBP9.47□□□□□ -0.89
NUP50-216ENST00000486184 BTNL3Q6UXE8 466 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 CLEC9AQ6UXN8 241 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 GDPD3Q7L5L3 318 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 OR2W3Q7Z3T1 314 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 CROCCP3Q8IVE0 287 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 OR51D1Q8NGF3 324 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 OR5D13Q8NGL4 314 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 TMEM186Q96B77 213 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 FAM3DQ96BQ1 224 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 C1orf159Q96HA4 380 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 SNX22Q96L94 193 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 URM1Q9BTM9 101 aaKnown RBP9.47□□□□□ -0.89
NUP50-216ENST00000486184 SEBOXQ9HB31 216 aaPredicted RBP9.47□□□□□ -0.89
NUP50-216ENST00000486184 YAE1D1Q9NRH1 226 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 DUX4Q9UBX2 424 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 DAPK2Q9UIK4 370 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 KCNS2Q9ULS6 477 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 MAB21L2Q9Y586 359 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 A0A0G2JMP0 313 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 A0A0X1KG70 313 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 A0A1W2PP11 408 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 A0A1W2PQ09 198 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 CCDC160A6NGH7 325 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 GEMIN2O14893 280 aaKnown RBP9.46□□□□□ -0.9
NUP50-216ENST00000486184 ENSAO43768 121 aaKnown RBP9.46□□□□□ -0.9
NUP50-216ENST00000486184 GABARAPO95166 117 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 IL1AP01583 271 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 TK1P04183 234 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 CLEC2LP0C7M8 214 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 VSIG8P0DPA2 414 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 SELLP14151 372 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 AMY2BP19961 511 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 TGFBR1P36897 503 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 DVL1P1P54792 670 aaPredicted RBP9.46□□□□□ -0.9
NUP50-216ENST00000486184 CAV3P56539 151 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 EDDM3BP56851 147 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 NCS1P62166 190 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 GRK1Q15835 563 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 FAM189A2Q15884 450 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 C11orf91Q3C1V1 193 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 PAN3Q58A45 887 aaKnown RBP9.46□□□□□ -0.9
NUP50-216ENST00000486184 IDNKQ5T6J7 187 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 SFXN4Q6P4A7 337 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 ZNF841Q6ZN19 808 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 USP43Q70EL4 1123 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 BTN2A1Q7KYR7 527 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 OR8H2Q8N162 312 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 TMEM104Q8NE00 496 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 Q8NFD4 153 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 OR4M2Q8NGB6 313 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 NEK7Q8TDX7 302 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 RAB2BQ8WUD1 216 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 CHST6Q9GZX3 395 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 LIN7BQ9HAP6 207 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 SPACA1Q9HBV2 294 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 HIF1ANQ9NWT6 349 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 DSCAML1Q8TD84 2053 aa9.46□□□□□ -0.9
NUP50-216ENST00000486184 ARHGAP32A7KAX9 2087 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 A0A1W2PPH5 198 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 FUOMA2VDF0 154 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 FAM90A10PA6NDY2 464 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 FAM90A18PA6NE21 464 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 FAM90A16PA6NEW6 464 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 FAM90A20PA6NIJ5 464 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 FAM90A8PA6NJQ4 464 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 FAM90A7PA6NKC0 464 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 FAM90A22PA8MWA6 464 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 KIAA1324LA8MWY0 1029 aaPredicted RBP9.45□□□□□ -0.9
NUP50-216ENST00000486184 FAM90A12PA8MX19 464 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 FAM90A5PA8MXJ8 464 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 FAM90A23PA8MXZ1 464 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 K7N7A8 449 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 HSPB6O14558 160 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 LY6G6DO95868 133 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 FAM90A15PP0C7V4 464 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 FAM90A13PP0C7W8 464 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 FAM90A14PP0C7W9 464 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 FAM90A24PP0C7X0 464 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 CD37P11049 281 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 SLC2A2P11168 524 aaPredicted RBP9.45□□□□□ -0.9
NUP50-216ENST00000486184 GATA3P23771 443 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 ZFP36P26651 326 aaKnown RBP9.45□□□□□ -0.9
NUP50-216ENST00000486184 TMBIM6P55061 237 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 RPS27AP62979 156 aaKnown RBP9.45□□□□□ -0.9
NUP50-216ENST00000486184 EDDM3AQ14507 147 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 PDCD1Q15116 288 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 TAF9Q16594 264 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 C2orf76Q3KRA6 126 aa9.45□□□□□ -0.9
NUP50-216ENST00000486184 OR10K2Q6IF99 312 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms