RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, human

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPUSD3-217	ENST00000485705	ASCC1	Q8N9N2	400 aa	Known RBP	12.83	□□□□□ -0.36
RPUSD3-217	ENST00000485705	OR51T1	Q8NGJ9	327 aa		12.83	□□□□□ -0.36
RPUSD3-217	ENST00000485705	OR6M1	Q8NGM8	313 aa		12.83	□□□□□ -0.36
RPUSD3-217	ENST00000485705	FAM46B	Q96A09	425 aa		12.83	□□□□□ -0.36
RPUSD3-217	ENST00000485705	SEBOX	Q9HB31	216 aa	Predicted RBP	12.83	□□□□□ -0.36
RPUSD3-217	ENST00000485705	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	12.83	□□□□□ -0.36
RPUSD3-217	ENST00000485705	LOC105371242	A0A075B767	164 aa		12.82	□□□□□ -0.36
RPUSD3-217	ENST00000485705		A0A0B4J203	849 aa		12.82	□□□□□ -0.36
RPUSD3-217	ENST00000485705	TRAV20	A0A0B4J274	112 aa		12.82	□□□□□ -0.36
RPUSD3-217	ENST00000485705	SH2D1B	O14796	132 aa		12.82	□□□□□ -0.36
RPUSD3-217	ENST00000485705	PSPN	O60542	156 aa		12.82	□□□□□ -0.36
RPUSD3-217	ENST00000485705	VSIG8	P0DPA2	414 aa		12.82	□□□□□ -0.36
RPUSD3-217	ENST00000485705	NDUFB7	P17568	137 aa		12.82	□□□□□ -0.36
RPUSD3-217	ENST00000485705	PSMD7	P51665	324 aa		12.82	□□□□□ -0.36
RPUSD3-217	ENST00000485705	DVL1P1	P54792	670 aa	Predicted RBP	12.82	□□□□□ -0.36
RPUSD3-217	ENST00000485705	RBM11	P57052	281 aa	Known RBP	12.82	□□□□□ -0.36
RPUSD3-217	ENST00000485705	RIPPLY3	P57055	190 aa		12.82	□□□□□ -0.36
RPUSD3-217	ENST00000485705	RAB11B	Q15907	218 aa		12.82	□□□□□ -0.36
RPUSD3-217	ENST00000485705	GPR107	Q5VW38	600 aa		12.82	□□□□□ -0.36
RPUSD3-217	ENST00000485705	C17orf107	Q6ZR85	190 aa		12.82	□□□□□ -0.36
RPUSD3-217	ENST00000485705	SLC16A12	Q6ZSM3	486 aa		12.82	□□□□□ -0.36
RPUSD3-217	ENST00000485705	BTN2A1	Q7KYR7	527 aa		12.82	□□□□□ -0.36
RPUSD3-217	ENST00000485705	GPR141	Q7Z602	305 aa		12.82	□□□□□ -0.36
RPUSD3-217	ENST00000485705	GLCCI1	Q86VQ1	547 aa		12.82	□□□□□ -0.36
RPUSD3-217	ENST00000485705	OR4S1	Q8NGB4	309 aa		12.82	□□□□□ -0.36
RPUSD3-217	ENST00000485705	DACT3	Q96B18	629 aa	Predicted RBP	12.82	□□□□□ -0.36
RPUSD3-217	ENST00000485705	CHST6	Q9GZX3	395 aa		12.82	□□□□□ -0.36
RPUSD3-217	ENST00000485705	SHARPIN	Q9H0F6	387 aa		12.82	□□□□□ -0.36
RPUSD3-217	ENST00000485705	OR5V1	Q9UGF6	321 aa		12.82	□□□□□ -0.36
RPUSD3-217	ENST00000485705	ST3GAL6	Q9Y274	331 aa		12.82	□□□□□ -0.36
RPUSD3-217	ENST00000485705	IFITM5	A6NNB3	132 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705		K7N7A8	449 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	GEMIN2	O14893	280 aa	Known RBP	12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	DEGS1	O15121	323 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	ZNF780A	O75290	641 aa	Predicted RBP	12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	CRTAP	O75718	401 aa	Predicted RBP	12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	MPIG6B	O95866	241 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	TK1	P04183	234 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	SLC2A2	P11168	524 aa	Predicted RBP	12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	GTF2F2	P13984	249 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	ZNF44	P15621	663 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	MGMT	P16455	207 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	GABRR1	P24046	479 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	NCS1	P62166	190 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	QRFP	P83859	136 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	UNC119	Q13432	240 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	GPR176	Q14439	515 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	IL13RA2	Q14627	380 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	TAF9	Q16594	264 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	NHLRC3	Q5JS37	347 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	TPRA1	Q86W33	373 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	ANKRD13B	Q86YJ7	626 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	OR51D1	Q8NGF3	324 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	RAB40A	Q8WXH6	277 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	H1FX	Q92522	213 aa	Known RBP	12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	CYYR1	Q96J86	154 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	SNX22	Q96L94	193 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	SELENOI	Q9C0D9	397 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	GHRL	Q9UBU3	117 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	STEAP1	Q9UHE8	339 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	GLS2	Q9UI32	602 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	SCOC	Q9UIL1	159 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	INSIG2	Q9Y5U4	225 aa		12.81	□□□□□ -0.36
RPUSD3-217	ENST00000485705	TRAV24	A0A0B4J272	114 aa		12.8	□□□□□ -0.36
RPUSD3-217	ENST00000485705	IGHV2-70D	A0A0C4DH43	119 aa		12.8	□□□□□ -0.36
RPUSD3-217	ENST00000485705		A8MV72	311 aa	Predicted RBP	12.8	□□□□□ -0.36
RPUSD3-217	ENST00000485705	TMEM14DP	A8MWL7	114 aa		12.8	□□□□□ -0.36
RPUSD3-217	ENST00000485705	SLC33A1	O00400	549 aa	Predicted RBP	12.8	□□□□□ -0.36
RPUSD3-217	ENST00000485705	HSPB6	O14558	160 aa		12.8	□□□□□ -0.36
RPUSD3-217	ENST00000485705	BPNT1	O95861	308 aa		12.8	□□□□□ -0.36
RPUSD3-217	ENST00000485705	UBB	P0CG47	229 aa		12.8	□□□□□ -0.36
RPUSD3-217	ENST00000485705	ARSB	P15848	533 aa		12.8	□□□□□ -0.36
RPUSD3-217	ENST00000485705	LMO1	P25800	156 aa		12.8	□□□□□ -0.36
RPUSD3-217	ENST00000485705	RPL5	P46777	297 aa	Known RBP	12.8	□□□□□ -0.36
RPUSD3-217	ENST00000485705	OR3A1	P47881	315 aa		12.8	□□□□□ -0.36
RPUSD3-217	ENST00000485705	VBP1	P61758	197 aa		12.8	□□□□□ -0.36
RPUSD3-217	ENST00000485705	PLA2G7	Q13093	441 aa		12.8	□□□□□ -0.36
RPUSD3-217	ENST00000485705	C2orf76	Q3KRA6	126 aa		12.8	□□□□□ -0.36
RPUSD3-217	ENST00000485705	FAHD2B	Q6P2I3	314 aa	Predicted RBP	12.8	□□□□□ -0.36
RPUSD3-217	ENST00000485705	OR4M1	Q8NGD0	313 aa		12.8	□□□□□ -0.36
RPUSD3-217	ENST00000485705	FAM3D	Q96BQ1	224 aa		12.8	□□□□□ -0.36
RPUSD3-217	ENST00000485705	FAHD2A	Q96GK7	314 aa		12.8	□□□□□ -0.36
RPUSD3-217	ENST00000485705	NUDT16L1	Q9BRJ7	211 aa	Known RBP	12.8	□□□□□ -0.36
RPUSD3-217	ENST00000485705	DCTN5	Q9BTE1	182 aa		12.8	□□□□□ -0.36
RPUSD3-217	ENST00000485705	PPA2	Q9H2U2	334 aa		12.8	□□□□□ -0.36
RPUSD3-217	ENST00000485705	PCDHB16	Q9NRJ7	776 aa		12.8	□□□□□ -0.36
RPUSD3-217	ENST00000485705	RPUSD1	Q9UJJ7	312 aa	Known RBP	12.8	□□□□□ -0.36
RPUSD3-217	ENST00000485705	KCNS2	Q9ULS6	477 aa		12.8	□□□□□ -0.36
RPUSD3-217	ENST00000485705	NAV3	Q8IVL0	2385 aa		12.79	□□□□□ -0.36
RPUSD3-217	ENST00000485705	PPIAL4C	A0A0B4J2A2	164 aa		12.79	□□□□□ -0.36
RPUSD3-217	ENST00000485705	NOTO	A8MTQ0	251 aa		12.79	□□□□□ -0.36
RPUSD3-217	ENST00000485705	AIP	O00170	330 aa		12.79	□□□□□ -0.36
RPUSD3-217	ENST00000485705	OR7C1	O76099	320 aa	Predicted RBP	12.79	□□□□□ -0.36
RPUSD3-217	ENST00000485705	GABARAP	O95166	117 aa		12.79	□□□□□ -0.36
RPUSD3-217	ENST00000485705	AVP	P01185	164 aa		12.79	□□□□□ -0.36
RPUSD3-217	ENST00000485705	CFP	P27918	469 aa		12.79	□□□□□ -0.36
RPUSD3-217	ENST00000485705	EDDM3A	Q14507	147 aa		12.79	□□□□□ -0.36
RPUSD3-217	ENST00000485705	GRK1	Q15835	563 aa		12.79	□□□□□ -0.36
RPUSD3-217	ENST00000485705	CTF1	Q16619	201 aa		12.79	□□□□□ -0.36
RPUSD3-217	ENST00000485705	CR1L	Q2VPA4	569 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms