RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 ZNF91Q05481 1191 aa11.65□□□□□ -0.54
HDAC6-224ENST00000481929 ZNF829Q3KNS6 432 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-224ENST00000481929 DEGS2Q6QHC5 323 aa11.65□□□□□ -0.54
HDAC6-224ENST00000481929 AQP11Q8NBQ7 271 aa11.65□□□□□ -0.54
HDAC6-224ENST00000481929 CADM1Q9BY67 442 aaKnown RBP11.65□□□□□ -0.54
HDAC6-224ENST00000481929 GORASP2Q9H8Y8 452 aa11.65□□□□□ -0.54
HDAC6-224ENST00000481929 EFCAB1Q9HAE3 211 aa11.65□□□□□ -0.54
HDAC6-224ENST00000481929 IL36RNQ9UBH0 155 aa11.65□□□□□ -0.54
HDAC6-224ENST00000481929 U3KQV3 271 aa11.65□□□□□ -0.54
HDAC6-224ENST00000481929 A0A087X0M5 115 aa11.64□□□□□ -0.55
HDAC6-224ENST00000481929 A0A1B0GX30 115 aa11.64□□□□□ -0.55
HDAC6-224ENST00000481929 A0A1W2PPI3 338 aa11.64□□□□□ -0.55
HDAC6-224ENST00000481929 CCNB2O95067 398 aa11.64□□□□□ -0.55
HDAC6-224ENST00000481929 IGKV1D-33P01593 117 aa11.64□□□□□ -0.55
HDAC6-224ENST00000481929 IGKV1-33P01594 117 aa11.64□□□□□ -0.55
HDAC6-224ENST00000481929 ALOX5APP20292 161 aa11.64□□□□□ -0.55
HDAC6-224ENST00000481929 DUSP1P28562 367 aa11.64□□□□□ -0.55
HDAC6-224ENST00000481929 PTGFRP43088 359 aa11.64□□□□□ -0.55
HDAC6-224ENST00000481929 HMGA2P52926 109 aa11.64□□□□□ -0.55
HDAC6-224ENST00000481929 SRSF7Q16629 238 aaKnown RBP eCLIP11.64□□□□□ -0.55
HDAC6-224ENST00000481929 HACD2Q6Y1H2 254 aa11.64□□□□□ -0.55
HDAC6-224ENST00000481929 OR9G1Q8NH87 305 aa11.64□□□□□ -0.55
HDAC6-224ENST00000481929 CORO2AQ92828 525 aa11.64□□□□□ -0.55
HDAC6-224ENST00000481929 SPATA25Q9BR10 227 aa11.64□□□□□ -0.55
HDAC6-224ENST00000481929 MROQ9BYG7 248 aa11.64□□□□□ -0.55
HDAC6-224ENST00000481929 CCDC134Q9H6E4 229 aa11.64□□□□□ -0.55
HDAC6-224ENST00000481929 GTF2A1LQ9UNN4 478 aa11.64□□□□□ -0.55
HDAC6-224ENST00000481929 V9GYS6 101 aa11.64□□□□□ -0.55
HDAC6-224ENST00000481929 A6NIN4 97 aa11.63□□□□□ -0.55
HDAC6-224ENST00000481929 PRR23D1E9PI22 279 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-224ENST00000481929 TTRP02766 147 aa11.63□□□□□ -0.55
HDAC6-224ENST00000481929 PRR23D2P0DMB1 279 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-224ENST00000481929 PSME3P61289 254 aa11.63□□□□□ -0.55
HDAC6-224ENST00000481929 ZNF616Q08AN1 781 aa11.63□□□□□ -0.55
HDAC6-224ENST00000481929 SLC25A26Q70HW3 274 aa11.63□□□□□ -0.55
HDAC6-224ENST00000481929 TGIF2LXQ8IUE1 241 aa11.63□□□□□ -0.55
HDAC6-224ENST00000481929 Q8IYB0 196 aa11.63□□□□□ -0.55
HDAC6-224ENST00000481929 IQCF1Q8N6M8 205 aa11.63□□□□□ -0.55
HDAC6-224ENST00000481929 OR1N2Q8NGR9 330 aa11.63□□□□□ -0.55
HDAC6-224ENST00000481929 IL17DQ8TAD2 202 aa11.63□□□□□ -0.55
HDAC6-224ENST00000481929 TEX47Q8TBZ9 253 aa11.63□□□□□ -0.55
HDAC6-224ENST00000481929 ABCG5Q9H222 651 aa11.63□□□□□ -0.55
HDAC6-224ENST00000481929 LIN7CQ9NUP9 197 aaKnown RBP11.63□□□□□ -0.55
HDAC6-224ENST00000481929 PCLOQ9Y6V0 5065 aa11.62□□□□□ -0.55
HDAC6-224ENST00000481929 PLECQ15149 4684 aaKnown RBP11.62□□□□□ -0.55
HDAC6-224ENST00000481929 NCBP2LA6PVI3 153 aaKnown RBP11.62□□□□□ -0.55
HDAC6-224ENST00000481929 OVOL1O14753 267 aa11.62□□□□□ -0.55
HDAC6-224ENST00000481929 PRODHO43272 600 aa11.62□□□□□ -0.55
HDAC6-224ENST00000481929 IGHG4P01861 327 aa11.62□□□□□ -0.55
HDAC6-224ENST00000481929 IFNA6P05013 189 aa11.62□□□□□ -0.55
HDAC6-224ENST00000481929 IGHV4-30-4P0DP06 118 aa11.62□□□□□ -0.55
HDAC6-224ENST00000481929 VDAC1P21796 283 aa11.62□□□□□ -0.55
HDAC6-224ENST00000481929 NFYBP25208 207 aa11.62□□□□□ -0.55
HDAC6-224ENST00000481929 GLIPR1P48060 266 aa11.62□□□□□ -0.55
HDAC6-224ENST00000481929 RAB7AP51149 207 aa11.62□□□□□ -0.55
HDAC6-224ENST00000481929 HCCSP53701 268 aa11.62□□□□□ -0.55
HDAC6-224ENST00000481929 CDC42P60953 191 aa11.62□□□□□ -0.55
HDAC6-224ENST00000481929 GABPB1Q06547 395 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-224ENST00000481929 MFGE8Q08431 387 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-224ENST00000481929 MADCAM1Q13477 382 aa11.62□□□□□ -0.55
HDAC6-224ENST00000481929 ASPHD1Q5U4P2 390 aa11.62□□□□□ -0.55
HDAC6-224ENST00000481929 OR8H3Q8N146 312 aa11.62□□□□□ -0.55
HDAC6-224ENST00000481929 OR6Q1Q8NGQ2 317 aa11.62□□□□□ -0.55
HDAC6-224ENST00000481929 OR14K1Q8NGZ2 314 aa11.62□□□□□ -0.55
HDAC6-224ENST00000481929 ST6GALNAC6Q969X2 333 aa11.62□□□□□ -0.55
HDAC6-224ENST00000481929 SPAG4Q9NPE6 437 aa11.62□□□□□ -0.55
HDAC6-224ENST00000481929 MAGEL2Q9UJ55 1249 aa11.62□□□□□ -0.55
HDAC6-224ENST00000481929 IGKV1-27A0A075B6S5 117 aa11.61□□□□□ -0.55
HDAC6-224ENST00000481929 DHRS7CA6NNS2 312 aa11.61□□□□□ -0.55
HDAC6-224ENST00000481929 SIRPB1O00241 398 aa11.61□□□□□ -0.55
HDAC6-224ENST00000481929 ZNF254O75437 659 aa11.61□□□□□ -0.55
HDAC6-224ENST00000481929 E2F6O75461 281 aa11.61□□□□□ -0.55
HDAC6-224ENST00000481929 PSMB8P28062 276 aa11.61□□□□□ -0.55
HDAC6-224ENST00000481929 RIDAP52758 137 aaKnown RBP11.61□□□□□ -0.55
HDAC6-224ENST00000481929 SNU13P55769 128 aaKnown RBP11.61□□□□□ -0.55
HDAC6-224ENST00000481929 RPS7P62081 194 aaKnown RBP11.61□□□□□ -0.55
HDAC6-224ENST00000481929 CFHR3Q02985 330 aa11.61□□□□□ -0.55
HDAC6-224ENST00000481929 AESQ08117 197 aa11.61□□□□□ -0.55
HDAC6-224ENST00000481929 ZNF146Q15072 292 aa11.61□□□□□ -0.55
HDAC6-224ENST00000481929 SPIN3Q5JUX0 258 aa11.61□□□□□ -0.55
HDAC6-224ENST00000481929 UTF1Q5T230 341 aa11.61□□□□□ -0.55
HDAC6-224ENST00000481929 ZNF679Q8IYX0 411 aa11.61□□□□□ -0.55
HDAC6-224ENST00000481929 FAM58AQ8N1B3 248 aa11.61□□□□□ -0.55
HDAC6-224ENST00000481929 DCUN1D4Q92564 292 aa11.61□□□□□ -0.55
HDAC6-224ENST00000481929 DGCR6LQ9BY27 220 aa11.61□□□□□ -0.55
HDAC6-224ENST00000481929 YIPF3Q9GZM5 350 aa11.61□□□□□ -0.55
HDAC6-224ENST00000481929 MOB1AQ9H8S9 216 aa11.61□□□□□ -0.55
HDAC6-224ENST00000481929 RBFOX1Q9NWB1 397 aaKnown RBP11.61□□□□□ -0.55
HDAC6-224ENST00000481929 TRBV2A0A0J9YWF9 115 aa11.6□□□□□ -0.55
HDAC6-224ENST00000481929 ODAMA1E959 279 aa11.6□□□□□ -0.55
HDAC6-224ENST00000481929 ZNF729A6NN14 1252 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-224ENST00000481929 LOC110117498-PIK3R3F6TDL0 507 aa11.6□□□□□ -0.55
HDAC6-224ENST00000481929 H3BN98 237 aa11.6□□□□□ -0.55
HDAC6-224ENST00000481929 J3QR06 171 aa11.6□□□□□ -0.55
HDAC6-224ENST00000481929 ENTPD6O75354 484 aa11.6□□□□□ -0.55
HDAC6-224ENST00000481929 PRKACAP17612 351 aa11.6□□□□□ -0.55
HDAC6-224ENST00000481929 FUT6P51993 359 aa11.6□□□□□ -0.55
HDAC6-224ENST00000481929 ROM1Q03395 351 aa11.6□□□□□ -0.55
HDAC6-224ENST00000481929 DIAPH2-AS1Q14236 149 aa11.6□□□□□ -0.55
HDAC6-224ENST00000481929 SLC35D3Q5M8T2 416 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms