RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 H3BQF6 201 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 K7EM74 188 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 TXNDC9O14530 226 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 LSM1O15116 133 aaKnown RBP3.33□□□□□ -1.88
UPF3A-207ENST00000481131 CHST1O43916 411 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 OR2F2O95006 317 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 H6PDO95479 791 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 OTCP00480 354 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 PRB1P04280 392 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 FREM3P0C091 2139 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 LINC00032P0C843 101 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 COX6A1P12074 109 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 HRH1P35367 487 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 CXCL5P42830 114 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 RAP1GDS1P52306 607 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 RAB38P57729 211 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 STXBP1P61764 594 aaKnown RBP3.33□□□□□ -1.88
UPF3A-207ENST00000481131 NUTF2P61970 127 aaKnown RBP3.33□□□□□ -1.88
UPF3A-207ENST00000481131 RPS15P62841 145 aaKnown RBP3.33□□□□□ -1.88
UPF3A-207ENST00000481131 ECH1Q13011 328 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 IFT88Q13099 833 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 SELENBP1Q13228 472 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 FAM53BQ14153 422 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 PON3Q15166 354 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 LINC00303Q3SY05 128 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 PIGGQ5H8A4 983 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 COA6Q5JTJ3 125 aaKnown RBP3.33□□□□□ -1.88
UPF3A-207ENST00000481131 AGBL2Q5U5Z8 902 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 HHATQ5VTY9 493 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 PRMT9Q6P2P2 845 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 ABHD13Q7L211 337 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 COMMD6Q7Z4G1 85 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 C6orf120Q7Z4R8 191 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 TTLQ8NG68 377 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 OR11G2Q8NGC1 345 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 OR5B3Q8NH48 314 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 CDC26Q8NHZ8 85 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 ZNF502Q8TBZ5 544 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 GIMAP1Q8WWP7 306 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 SRSF12Q8WXF0 261 aaKnown RBP3.33□□□□□ -1.88
UPF3A-207ENST00000481131 NRGNQ92686 78 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 PIK3IP1Q96FE7 263 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 ATP6V1G3Q96LB4 118 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 PPP1R36Q96LQ0 422 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 ECSITQ9BQ95 431 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 C20orf24Q9BUV8 137 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 EBPLQ9BY08 206 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 ELOVL6Q9H5J4 265 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 WDR54Q9H977 334 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 ZNF282Q9UDV7 671 aaPredicted RBP3.33□□□□□ -1.88
UPF3A-207ENST00000481131 C3orf18Q9UK00 162 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 POLR3HQ9Y535 204 aaPredicted RBP3.33□□□□□ -1.88
UPF3A-207ENST00000481131 WSB1Q9Y6I7 421 aa3.33□□□□□ -1.88
UPF3A-207ENST00000481131 SMG1Q96Q15 3661 aaKnown RBP3.33□□□□□ -1.88
UPF3A-207ENST00000481131 SHANK1Q9Y566 2161 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 CNTRLQ7Z7A1 2325 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 FAM208BQ5VWN6 2430 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 TLN1Q9Y490 2541 aaKnown RBP3.32□□□□□ -1.88
UPF3A-207ENST00000481131 IGKV3D-11A0A0A0MRZ8 115 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 IGHV1-45A0A0A0MS14 117 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 TRAV39A0A0B4J263 110 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 A0A0B4J2A0 478 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 ZNF816-ZNF321PA0A0X1KG74 233 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 CIB4A0PJX0 185 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 PRSS37A4D1T9 235 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 XKRYO14609 159 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 AZIN1O14977 448 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 BIRC5O15392 142 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 SCELO95171 688 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 AIFM1O95831 613 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 SERPINE1P05121 402 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 SERPINA5P05154 406 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 KLK1P06870 262 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 IL3P08700 152 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 ZNF250P15622 560 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 HIST1H1TP22492 207 aaPredicted RBP3.32□□□□□ -1.88
UPF3A-207ENST00000481131 CPN2P22792 545 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 SERPINB1P30740 379 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 OTX1P32242 354 aaPredicted RBP3.32□□□□□ -1.88
UPF3A-207ENST00000481131 ZNF136P52737 540 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 EMP2P54851 167 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 UCNP55089 124 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 RPL38P63173 70 aaKnown RBP3.32□□□□□ -1.88
UPF3A-207ENST00000481131 SLAMF1Q13291 335 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 MADCAM1Q13477 382 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 SPANXN2Q5MJ10 180 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 C9orf135Q5VTT2 229 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 TMEM205Q6UW68 189 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 DGAT2L6Q6ZPD8 337 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 SLC16A14Q7RTX9 510 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 RAB43Q86YS6 212 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 KIF2BQ8N4N8 673 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 ZNF321PQ8N8H1 164 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 OR4C5Q8NGB2 326 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 CLHC1Q8NHS4 586 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 CD300LFQ8TDQ1 290 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 TWIST2Q8WVJ9 160 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 MCUR1Q96AQ8 359 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 FAM210BQ96KR6 192 aa3.32□□□□□ -1.88
UPF3A-207ENST00000481131 WFIKKN1Q96NZ8 548 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms