RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 TRAPPC1Q9Y5R8 145 aa9.05□□□□□ -0.96
PRPF4B-206ENST00000481109 TNS1Q9HBL0 1735 aaKnown RBP9.05□□□□□ -0.96
PRPF4B-206ENST00000481109 NUP210LQ5VU65 1888 aa9.05□□□□□ -0.96
PRPF4B-206ENST00000481109 A0A1B0GV50 99 aa9.05□□□□□ -0.96
PRPF4B-206ENST00000481109 A0A1W2PR80 420 aa9.05□□□□□ -0.96
PRPF4B-206ENST00000481109 TMEM189A5PLL7 270 aa9.05□□□□□ -0.96
PRPF4B-206ENST00000481109 SIRPB1O00241 398 aa9.05□□□□□ -0.96
PRPF4B-206ENST00000481109 GPR182O15218 404 aa9.05□□□□□ -0.96
PRPF4B-206ENST00000481109 DUSP11O75319 330 aaKnown RBP9.05□□□□□ -0.96
PRPF4B-206ENST00000481109 TACSTD2P09758 323 aa9.05□□□□□ -0.96
PRPF4B-206ENST00000481109 THBS3P49746 956 aa9.05□□□□□ -0.96
PRPF4B-206ENST00000481109 RUNX1Q01196 453 aa9.05□□□□□ -0.96
PRPF4B-206ENST00000481109 AESQ08117 197 aa9.05□□□□□ -0.96
PRPF4B-206ENST00000481109 PMCHL1Q16048 86 aa9.05□□□□□ -0.96
PRPF4B-206ENST00000481109 C1QL3Q5VWW1 255 aa9.05□□□□□ -0.96
PRPF4B-206ENST00000481109 FAM166AQ6J272 317 aa9.05□□□□□ -0.96
PRPF4B-206ENST00000481109 ZNF562Q6V9R5 426 aa9.05□□□□□ -0.96
PRPF4B-206ENST00000481109 SYT13Q7L8C5 426 aa9.05□□□□□ -0.96
PRPF4B-206ENST00000481109 TMEM230Q96A57 120 aa9.05□□□□□ -0.96
PRPF4B-206ENST00000481109 PLD4Q96BZ4 506 aa9.05□□□□□ -0.96
PRPF4B-206ENST00000481109 DERL1Q9BUN8 251 aa9.05□□□□□ -0.96
PRPF4B-206ENST00000481109 REPIN1Q9BWE0 567 aaKnown RBP9.05□□□□□ -0.96
PRPF4B-206ENST00000481109 TMEM121BQ9BXQ6 578 aaPredicted RBP9.05□□□□□ -0.96
PRPF4B-206ENST00000481109 A0A0G2JMM0 328 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 A0A1W2PPB8 328 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 RIIAD1A6NNX1 92 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 KIR3DP1A8MWS1 328 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 HMGN4O00479 90 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 MT-ATP6P00846 226 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 KLKB1P03952 638 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 CORO1AP31146 461 aaKnown RBP9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 GPR12P47775 334 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 NPBWR2P48146 333 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 SLC16A1P53985 500 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 GFRA1P56159 465 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 ANKRD55Q3KP44 614 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 MS4A13Q5J8X5 152 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 WBP2NLQ6ICG8 309 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 C12orf54Q6X4T0 127 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 SLC16A9Q7RTY1 509 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 TMEM45BQ96B21 275 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 MED10Q9BTT4 135 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 DUSP23Q9BVJ7 150 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 OR51I2Q9H344 312 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 MMP25Q9NPA2 562 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 SS18L2Q9UHA2 77 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 FBXL7Q9UJT9 491 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 SLC13A4Q9UKG4 626 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 ZNF780BQ9Y6R6 833 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 GAGE12HA6NDE8 117 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 ZNF253O75346 499 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 FRKP42685 505 aaPredicted RBP9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 LINC00310P59036 64 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 PCK2Q16822 640 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 LHFPL2Q6ZUX7 228 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 BOD1L2Q8IYS8 172 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 RFLNBQ8N5W9 214 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 MAGEH1Q9H213 219 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 MRPL16Q9NX20 251 aaKnown RBP9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 PRSS50Q9UI38 385 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 PLXNA1Q9UIW2 1896 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 TP53TG3Q9ULZ0 132 aa9.04□□□□□ -0.96
PRPF4B-206ENST00000481109 IGSF23A1L1A6 192 aa9.03□□□□□ -0.96
PRPF4B-206ENST00000481109 M0R1X1 148 aa9.03□□□□□ -0.96
PRPF4B-206ENST00000481109 TNFRSF13BO14836 293 aaPredicted RBP9.03□□□□□ -0.96
PRPF4B-206ENST00000481109 RAB29O14966 203 aa9.03□□□□□ -0.96
PRPF4B-206ENST00000481109 PIRTP0C851 137 aa9.03□□□□□ -0.96
PRPF4B-206ENST00000481109 GUCA1AP43080 201 aaPredicted RBP9.03□□□□□ -0.96
PRPF4B-206ENST00000481109 ARF3P61204 181 aaPredicted RBP9.03□□□□□ -0.96
PRPF4B-206ENST00000481109 YPEL3P61236 119 aaPredicted RBP9.03□□□□□ -0.96
PRPF4B-206ENST00000481109 SUPT4H1P63272 117 aaKnown RBP9.03□□□□□ -0.96
PRPF4B-206ENST00000481109 ZNF266Q14584 549 aa9.03□□□□□ -0.96
PRPF4B-206ENST00000481109 SPIN3Q5JUX0 258 aa9.03□□□□□ -0.96
PRPF4B-206ENST00000481109 PLXDC2Q6UX71 529 aa9.03□□□□□ -0.96
PRPF4B-206ENST00000481109 DTWD2Q8NBA8 298 aa9.03□□□□□ -0.96
PRPF4B-206ENST00000481109 FAM174AQ8TBP5 190 aa9.03□□□□□ -0.96
PRPF4B-206ENST00000481109 MARCH1Q8TCQ1 289 aa9.03□□□□□ -0.96
PRPF4B-206ENST00000481109 IGSF8Q969P0 613 aa9.03□□□□□ -0.96
PRPF4B-206ENST00000481109 SPSB4Q96A44 273 aa9.03□□□□□ -0.96
PRPF4B-206ENST00000481109 LRRC61Q9BV99 259 aa9.03□□□□□ -0.96
PRPF4B-206ENST00000481109 C5orf66Q9H5L9 145 aa9.03□□□□□ -0.96
PRPF4B-206ENST00000481109 TRAV8-7A0A075B6U6 113 aa9.02□□□□□ -0.96
PRPF4B-206ENST00000481109 TRAV8-6A0A0B4J262 113 aa9.02□□□□□ -0.96
PRPF4B-206ENST00000481109 A4D1N5 150 aa9.02□□□□□ -0.96
PRPF4B-206ENST00000481109 SIVA1O15304 175 aa9.02□□□□□ -0.96
PRPF4B-206ENST00000481109 RCBTB2O95199 551 aa9.02□□□□□ -0.96
PRPF4B-206ENST00000481109 IGLV3-25P01717 112 aa9.02□□□□□ -0.96
PRPF4B-206ENST00000481109 BCL2P10415 239 aa9.02□□□□□ -0.96
PRPF4B-206ENST00000481109 RHOQP17081 205 aa9.02□□□□□ -0.96
PRPF4B-206ENST00000481109 AADACP22760 399 aa9.02□□□□□ -0.96
PRPF4B-206ENST00000481109 Q0VG73 95 aa9.02□□□□□ -0.96
PRPF4B-206ENST00000481109 PMPCAQ10713 525 aa9.02□□□□□ -0.96
PRPF4B-206ENST00000481109 IAH1Q2TAA2 248 aaPredicted RBP9.02□□□□□ -0.96
PRPF4B-206ENST00000481109 BVES-AS1Q5T3Y7 98 aa9.02□□□□□ -0.96
PRPF4B-206ENST00000481109 MRPL54Q6P161 138 aaKnown RBP9.02□□□□□ -0.96
PRPF4B-206ENST00000481109 FIGLAQ6QHK4 219 aa9.02□□□□□ -0.96
PRPF4B-206ENST00000481109 Q7L0L9 218 aa9.02□□□□□ -0.96
PRPF4B-206ENST00000481109 ZNF627Q7L945 461 aa9.02□□□□□ -0.96
PRPF4B-206ENST00000481109 SLC35F2Q8IXU6 374 aa9.02□□□□□ -0.96
PRPF4B-206ENST00000481109 SIGLECL1Q8N7X8 197 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms