RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 OR51D1Q8NGF3 324 aa10.13□□□□□ -0.79
TRA2B-212ENST00000480461 KCTD7Q96MP8 289 aa10.13□□□□□ -0.79
TRA2B-212ENST00000480461 DNTTIP1Q9H147 329 aa10.13□□□□□ -0.79
TRA2B-212ENST00000480461 RHOFQ9HBH0 211 aa10.13□□□□□ -0.79
TRA2B-212ENST00000480461 CDC42EP3Q9UKI2 254 aa10.13□□□□□ -0.79
TRA2B-212ENST00000480461 POLR3KQ9Y2Y1 108 aaPredicted RBP10.13□□□□□ -0.79
TRA2B-212ENST00000480461 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.13□□□□□ -0.793e-12■■□□□ 12.6
TRA2B-212ENST00000480461 MALRD1Q5VYJ5 2156 aa10.12□□□□□ -0.79
TRA2B-212ENST00000480461 C22orf46C9J442 243 aa10.12□□□□□ -0.79
TRA2B-212ENST00000480461 OR2H2O95918 312 aa10.12□□□□□ -0.79
TRA2B-212ENST00000480461 HAND1O96004 215 aa10.12□□□□□ -0.79
TRA2B-212ENST00000480461 TGFAP01135 160 aa10.12□□□□□ -0.79
TRA2B-212ENST00000480461 SERPINA2P20848 420 aa10.12□□□□□ -0.79
TRA2B-212ENST00000480461 MYL9P24844 172 aa10.12□□□□□ -0.79
TRA2B-212ENST00000480461 CFPP27918 469 aa10.12□□□□□ -0.79
TRA2B-212ENST00000480461 UNC119Q13432 240 aa10.12□□□□□ -0.79
TRA2B-212ENST00000480461 CYB5R2Q6BCY4 276 aa10.12□□□□□ -0.79
TRA2B-212ENST00000480461 AWAT2Q6E213 333 aa10.12□□□□□ -0.79
TRA2B-212ENST00000480461 GPR141Q7Z602 305 aa10.12□□□□□ -0.79
TRA2B-212ENST00000480461 TPRA1Q86W33 373 aa10.12□□□□□ -0.79
TRA2B-212ENST00000480461 OSR2Q8N2R0 312 aa10.12□□□□□ -0.79
TRA2B-212ENST00000480461 LINC01356Q8N9X3 169 aa10.12□□□□□ -0.79
TRA2B-212ENST00000480461 PNLDC1Q8NA58 520 aaKnown RBP10.12□□□□□ -0.79
TRA2B-212ENST00000480461 OR4S1Q8NGB4 309 aa10.12□□□□□ -0.79
TRA2B-212ENST00000480461 OR8B3Q8NGG8 313 aa10.12□□□□□ -0.79
TRA2B-212ENST00000480461 OR6M1Q8NGM8 313 aa10.12□□□□□ -0.79
TRA2B-212ENST00000480461 FAM46BQ96A09 425 aa10.12□□□□□ -0.79
TRA2B-212ENST00000480461 RAB39BQ96DA2 213 aa10.12□□□□□ -0.79
TRA2B-212ENST00000480461 CPNE2Q96FN4 548 aaPredicted RBP10.12□□□□□ -0.79
TRA2B-212ENST00000480461 MED30Q96HR3 178 aa10.12□□□□□ -0.79
TRA2B-212ENST00000480461 OR8B2Q96RD0 313 aa10.12□□□□□ -0.79
TRA2B-212ENST00000480461 SSBP3Q9BWW4 388 aaPredicted RBP10.12□□□□□ -0.79
TRA2B-212ENST00000480461 A0A0A6YYD4 124 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 TRAV24A0A0B4J272 114 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 TMEM14DPA8MWL7 114 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 A8MXK9 166 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 B4DSR2 109 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 K7N7A8 449 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 PDCD5O14737 125 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 SH2D1BO14796 132 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 GEMIN2O14893 280 aaKnown RBP10.11□□□□□ -0.79
TRA2B-212ENST00000480461 GABARAPO95166 117 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 AVPP01185 164 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 TK1P04183 234 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 MSMBP08118 114 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 CHRM2P08172 466 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 CPT2P23786 658 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 GZMKP49863 264 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 PSMD7P51665 324 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 EFNB2P52799 333 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 GNB2P62879 340 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 IL13RA1P78552 427 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 SRSF2Q01130 221 aaKnown RBP10.11□□□□□ -0.79
TRA2B-212ENST00000480461 SCN1BQ07699 218 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 RAB11BQ15907 218 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 TAF9Q16594 264 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 NHLRC3Q5JS37 347 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 SPIN3Q5JUX0 258 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 SIGIRRQ6IA17 410 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 BRICD5Q6PL45 260 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 SLC36A1Q7Z2H8 476 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 RTN4RL2Q86UN3 420 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 ZNF561Q8N587 486 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 FAM3DQ96BQ1 224 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 BARHL1Q9BZE3 327 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 PLGRKTQ9HBL7 147 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 CLN8Q9UBY8 286 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 STEAP1Q9UHE8 339 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 SCOCQ9UIL1 159 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 ST3GAL6Q9Y274 331 aa10.11□□□□□ -0.79
TRA2B-212ENST00000480461 LOC105371242A0A075B767 164 aa10.1□□□□□ -0.79
TRA2B-212ENST00000480461 NOTOA8MTQ0 251 aa10.1□□□□□ -0.79
TRA2B-212ENST00000480461 AIPO00170 330 aa10.1□□□□□ -0.79
TRA2B-212ENST00000480461 SIRPB1O00241 398 aa10.1□□□□□ -0.79
TRA2B-212ENST00000480461 SLC33A1O00400 549 aaPredicted RBP10.1□□□□□ -0.79
TRA2B-212ENST00000480461 DEGS1O15121 323 aa10.1□□□□□ -0.79
TRA2B-212ENST00000480461 NDUFB3O43676 98 aa10.1□□□□□ -0.79
TRA2B-212ENST00000480461 ZNF780AO75290 641 aaPredicted RBP10.1□□□□□ -0.79
TRA2B-212ENST00000480461 CRTAPO75718 401 aaPredicted RBP10.1□□□□□ -0.79
TRA2B-212ENST00000480461 CSTBP04080 98 aaKnown RBP10.1□□□□□ -0.79
TRA2B-212ENST00000480461 GTF2F2P13984 249 aa10.1□□□□□ -0.79
TRA2B-212ENST00000480461 MGMTP16455 207 aa10.1□□□□□ -0.79
TRA2B-212ENST00000480461 ZNF16P17020 682 aaPredicted RBP10.1□□□□□ -0.79
TRA2B-212ENST00000480461 OR3A1P47881 315 aa10.1□□□□□ -0.79
TRA2B-212ENST00000480461 RBM11P57052 281 aaKnown RBP10.1□□□□□ -0.79
TRA2B-212ENST00000480461 TIMM50Q3ZCQ8 353 aa10.1□□□□□ -0.79
TRA2B-212ENST00000480461 ESCO2Q56NI9 601 aa10.1□□□□□ -0.79
TRA2B-212ENST00000480461 C1orf229Q6ZS94 237 aaPredicted RBP10.1□□□□□ -0.79
TRA2B-212ENST00000480461 BTN2A1Q7KYR7 527 aa10.1□□□□□ -0.79
TRA2B-212ENST00000480461 NLRC3Q7RTR2 1065 aa10.1□□□□□ -0.79
TRA2B-212ENST00000480461 LY6G5BQ8NDX9 201 aa10.1□□□□□ -0.79
TRA2B-212ENST00000480461 NDNFQ8TB73 568 aa10.1□□□□□ -0.79
TRA2B-212ENST00000480461 TMEM186Q96B77 213 aa10.1□□□□□ -0.79
TRA2B-212ENST00000480461 Q96M66 194 aa10.1□□□□□ -0.79
TRA2B-212ENST00000480461 S100A13Q99584 98 aa10.1□□□□□ -0.79
TRA2B-212ENST00000480461 SELENOIQ9C0D9 397 aa10.1□□□□□ -0.79
TRA2B-212ENST00000480461 CHST6Q9GZX3 395 aa10.1□□□□□ -0.79
TRA2B-212ENST00000480461 HIF1ANQ9NWT6 349 aa10.1□□□□□ -0.79
TRA2B-212ENST00000480461 GHRLQ9UBU3 117 aa10.1□□□□□ -0.79
TRA2B-212ENST00000480461 SLC25A10Q9UBX3 287 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms