RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 SMIM8Q96KF7 97 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 PRRX2Q99811 253 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 PAPOLGQ9BWT3 736 aaKnown RBP9.33□□□□□ -0.92
VPS52-217ENST00000478934 ARRDC1-AS1Q9H2J1 176 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 WFDC1Q9HC57 220 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 C19orf67A6NJJ6 358 aa9.32□□□□□ -0.92
VPS52-217ENST00000478934 C9orf172C9J069 976 aa9.32□□□□□ -0.92
VPS52-217ENST00000478934 NEURL1O76050 574 aa9.32□□□□□ -0.92
VPS52-217ENST00000478934 SNAPINO95295 136 aa9.32□□□□□ -0.92
VPS52-217ENST00000478934 NGFP01138 241 aa9.32□□□□□ -0.92
VPS52-217ENST00000478934 PET100P0DJ07 73 aa9.32□□□□□ -0.92
VPS52-217ENST00000478934 MAGEA5P43359 124 aa9.32□□□□□ -0.92
VPS52-217ENST00000478934 F2RL1P55085 397 aa9.32□□□□□ -0.92
VPS52-217ENST00000478934 FLI1Q01543 452 aaPredicted RBP9.32□□□□□ -0.92
VPS52-217ENST00000478934 CNN3Q15417 329 aaKnown RBP9.32□□□□□ -0.92
VPS52-217ENST00000478934 STK11Q15831 433 aa9.32□□□□□ -0.92
VPS52-217ENST00000478934 KRTAP27-1Q3LI81 207 aa9.32□□□□□ -0.92
VPS52-217ENST00000478934 ABCA11PQ4W5N1 156 aa9.32□□□□□ -0.92
VPS52-217ENST00000478934 PEAR1Q5VY43 1037 aaPredicted RBP9.32□□□□□ -0.92
VPS52-217ENST00000478934 ZNF611Q8N823 705 aa9.32□□□□□ -0.92
VPS52-217ENST00000478934 HSD17B11Q8NBQ5 300 aa9.32□□□□□ -0.92
VPS52-217ENST00000478934 SLAMF9Q96A28 289 aa9.32□□□□□ -0.92
VPS52-217ENST00000478934 ISOC2Q96AB3 205 aa9.32□□□□□ -0.92
VPS52-217ENST00000478934 ZNF442Q9H7R0 627 aa9.32□□□□□ -0.92
VPS52-217ENST00000478934 CARHSP1Q9Y2V2 147 aaKnown RBP9.32□□□□□ -0.92
VPS52-217ENST00000478934 NOSIPQ9Y314 301 aaKnown RBP9.32□□□□□ -0.92
VPS52-217ENST00000478934 MEX3AA1L020 520 aaKnown RBP9.32□□□□□ -0.92
VPS52-217ENST00000478934 YKT6O15498 198 aa9.32□□□□□ -0.92
VPS52-217ENST00000478934 RRP8O43159 456 aaKnown RBP9.32□□□□□ -0.92
VPS52-217ENST00000478934 C10orf91Q5T1B1 145 aa9.32□□□□□ -0.92
VPS52-217ENST00000478934 OR56B2PQ8NGI1 322 aa9.32□□□□□ -0.92
VPS52-217ENST00000478934 C10orf35Q96D05 121 aa9.32□□□□□ -0.92
VPS52-217ENST00000478934 SEC11CQ9BY50 192 aa9.32□□□□□ -0.92
VPS52-217ENST00000478934 NECAP2Q9NVZ3 263 aa9.32□□□□□ -0.92
VPS52-217ENST00000478934 NDRG3Q9UGV2 375 aa9.32□□□□□ -0.92
VPS52-217ENST00000478934 ZDHHC8Q9ULC8 765 aa9.32□□□□□ -0.92
VPS52-217ENST00000478934 MEMO1Q9Y316 297 aa9.32□□□□□ -0.92
VPS52-217ENST00000478934 C5orf49A4QMS7 147 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 CYTIPO60759 359 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 LILRA1O75019 489 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 MRPL33O75394 65 aaKnown RBP9.31□□□□□ -0.92
VPS52-217ENST00000478934 IFNA21P01568 189 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 SERPINA7P05543 415 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 CBR1P16152 277 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 BCL3P20749 454 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 AADACP22760 399 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 GPM6AP51674 278 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 TMEM187Q14656 261 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 SMCO1Q147U7 214 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 SURF2Q15527 256 aaPredicted RBP9.31□□□□□ -0.92
VPS52-217ENST00000478934 MIDNQ504T8 468 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 TMEM268Q5VZI3 342 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 DHRS7BQ6IAN0 325 aaPredicted RBP9.31□□□□□ -0.92
VPS52-217ENST00000478934 LHFPL2Q6ZUX7 228 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 ZNF488Q96MN9 340 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 CLCC1Q96S66 551 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 SLC2A9Q9NRM0 540 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 KIAA2026Q5HYC2 2103 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 B4E171 279 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 PHF1O43189 567 aaPredicted RBP9.31□□□□□ -0.92
VPS52-217ENST00000478934 CST4P01036 141 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 OMGP23515 440 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 TSPAN7P41732 249 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 SULT1A2P50226 295 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 RAB13P51153 203 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 SSPNQ14714 243 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 SWI5Q1ZZU3 235 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 ZNF528Q3MIS6 628 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 FAM76BQ5HYJ3 339 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 BTNL8Q6UX41 500 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 ASCL4Q6XD76 172 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 IL34Q6ZMJ4 242 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 GLYATL2Q8WU03 294 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 TP53RKQ96S44 253 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 NAA60Q9H7X0 242 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 DNAJB11Q9UBS4 358 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 SLC7A11Q9UPY5 501 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 ZNF175Q9Y473 711 aa9.31□□□□□ -0.92
VPS52-217ENST00000478934 JMJD7P0C870 316 aa9.3□□□□□ -0.92
VPS52-217ENST00000478934 LHX2P50458 406 aa9.3□□□□□ -0.92
VPS52-217ENST00000478934 FUT6P51993 359 aa9.3□□□□□ -0.92
VPS52-217ENST00000478934 TSC22D1Q15714 1073 aa9.3□□□□□ -0.92
VPS52-217ENST00000478934 OR2M7Q8NG81 312 aa9.3□□□□□ -0.92
VPS52-217ENST00000478934 KIRREL1Q96J84 757 aa9.3□□□□□ -0.92
VPS52-217ENST00000478934 IP6K3Q96PC2 410 aa9.3□□□□□ -0.92
VPS52-217ENST00000478934 BCO1Q9HAY6 547 aa9.3□□□□□ -0.92
VPS52-217ENST00000478934 ZFP57Q9NU63 452 aa9.3□□□□□ -0.92
VPS52-217ENST00000478934 DECR2Q9NUI1 292 aa9.3□□□□□ -0.92
VPS52-217ENST00000478934 HSF4Q9ULV5 492 aa9.3□□□□□ -0.92
VPS52-217ENST00000478934 IGHV3-64DA0A0J9YX35 117 aa9.3□□□□□ -0.92
VPS52-217ENST00000478934 ZNF816-ZNF321PA0A0X1KG74 233 aa9.3□□□□□ -0.92
VPS52-217ENST00000478934 CA11O75493 328 aa9.3□□□□□ -0.92
VPS52-217ENST00000478934 SNRNP70P08621 437 aaKnown RBP9.3□□□□□ -0.92
VPS52-217ENST00000478934 H2AFB1P0C5Y9 115 aa9.3□□□□□ -0.92
VPS52-217ENST00000478934 HAAOP46952 286 aa9.3□□□□□ -0.92
VPS52-217ENST00000478934 RBM11P57052 281 aaKnown RBP9.3□□□□□ -0.92
VPS52-217ENST00000478934 EIF3IQ13347 325 aaKnown RBP9.3□□□□□ -0.92
VPS52-217ENST00000478934 OR8B8Q15620 311 aa9.3□□□□□ -0.92
VPS52-217ENST00000478934 ATP1A1-AS1Q5TC04 95 aa9.3□□□□□ -0.92
VPS52-217ENST00000478934 DEFB123Q8N688 67 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms