RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 ZNF773Q6PK81 442 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 UNQ9370/PRO34162Q6UXP9 181 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 TMEM91Q6ZNR0 172 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 ZSCAN4Q8NAM6 433 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-222ENST00000478095 LY6G5BQ8NDX9 201 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 PXT1Q8NFP0 134 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 THRSPQ92748 146 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 MUL1Q969V5 352 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 CNTD2Q9H8S5 307 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 EXOSC4Q9NPD3 245 aaKnown RBP8.47□□□□□ -1.05
HDAC6-222ENST00000478095 SF3B6Q9Y3B4 125 aaKnown RBP8.47□□□□□ -1.05
HDAC6-222ENST00000478095 LRRC42Q9Y546 428 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 YLPM1P49750 1951 aaKnown RBP8.46□□□□□ -1.05
HDAC6-222ENST00000478095 C2CD3Q4AC94 2353 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 A0A1W2PP11 408 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 K7N7A8 449 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 HSPB6O14558 160 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 ZNF737O75373 536 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 TOX4O94842 621 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 HTR3BO95264 441 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 OR2H2O95918 312 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 LIPFP07098 398 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 UCHL1P09936 223 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 MMP9P14780 707 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 ZNF44P15621 663 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 SERPINA2P20848 420 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 GABRA5P31644 462 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 MTNR1BP49286 362 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 EDDM3BP56851 147 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 GRK1Q15835 563 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 KCTD21Q4G0X4 260 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 UBE2UQ5VVX9 321 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 METAP1DQ6UB28 335 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-222ENST00000478095 C17orf107Q6ZR85 190 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 LRRTM1Q86UE6 522 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 PDZD9Q8IXQ8 264 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 TPRX1Q8N7U7 411 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 OR4S1Q8NGB4 309 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 C8orf46Q8TAG6 207 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 UPRTQ96BW1 309 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 WDFY2Q96P53 400 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 TBX15Q96SF7 602 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 S100A13Q99584 98 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 SIRPDQ9H106 197 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 METTL9Q9H1A3 318 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 SIRT7Q9NRC8 400 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 ING3Q9NXR8 418 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 ZNF581Q9P0T4 197 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 GLS2Q9UI32 602 aa8.46□□□□□ -1.06
HDAC6-222ENST00000478095 MRPS28Q9Y2Q9 187 aaKnown RBP8.46□□□□□ -1.06
HDAC6-222ENST00000478095 SOX21Q9Y651 276 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-222ENST00000478095 NIPBLQ6KC79 2804 aaeCLIP8.45□□□□□ -1.06
HDAC6-222ENST00000478095 TRBV23-1A0A0A0MS06 115 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 SH2D1BO14796 132 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 IFNA2P01563 188 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 CSTBP04080 98 aaKnown RBP8.45□□□□□ -1.06
HDAC6-222ENST00000478095 CCL3L1P16619 93 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 SRMP19623 302 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 PSMA1P25786 263 aaKnown RBP8.45□□□□□ -1.06
HDAC6-222ENST00000478095 CALRP27797 417 aaKnown RBP8.45□□□□□ -1.06
HDAC6-222ENST00000478095 OR3A1P47881 315 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 RPL31P62899 125 aaKnown RBP8.45□□□□□ -1.06
HDAC6-222ENST00000478095 ZNF273Q14593 569 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 TRAM1Q15629 374 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 NEDD8Q15843 81 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 C11orf91Q3C1V1 193 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 SLC22A6Q4U2R8 563 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 ARSJQ5FYB0 599 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-222ENST00000478095 RUSC1-AS1Q66K80 236 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 AWAT2Q6E213 333 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 ELP2Q6IA86 826 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 Q6P435 159 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 GLIPR1L1Q6UWM5 242 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 ASCL4Q6XD76 172 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 BRD3OSQ6XYD6 125 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 GDPD3Q7L5L3 318 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 VMO1Q7Z5L0 202 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 BCL6BQ8N143 479 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-222ENST00000478095 OR8H2Q8N162 312 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 TEX29Q8N6K0 151 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 NKAIN3Q8N8D7 197 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 OR4D6Q8NGJ1 314 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 FCGR1BQ92637 280 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 LHX4Q969G2 390 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 SNX22Q96L94 193 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 SLC6A7Q99884 636 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 FAM234AQ9H0X4 552 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 PPA2Q9H2U2 334 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 RHOFQ9HBH0 211 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 NDUFB11Q9NX14 153 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 ZNF69Q9UC07 566 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 NUP50Q9UKX7 468 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 ARHGAP32A7KAX9 2087 aa8.45□□□□□ -1.06
HDAC6-222ENST00000478095 A0A1W2PRD5 423 aa8.44□□□□□ -1.06
HDAC6-222ENST00000478095 A0A1W2PRF3 423 aa8.44□□□□□ -1.06
HDAC6-222ENST00000478095 A0A1W2PRM7 423 aa8.44□□□□□ -1.06
HDAC6-222ENST00000478095 SLC33A1O00400 549 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-222ENST00000478095 CCRL2O00421 344 aa8.44□□□□□ -1.06
HDAC6-222ENST00000478095 DEGS1O15121 323 aa8.44□□□□□ -1.06
HDAC6-222ENST00000478095 ARL6IP5O75915 188 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms