RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 KCNIP2Q9NS61 270 aa-0.41□□□□□ -2.48
NCKAP1-204ENST00000477988 NDUFB11Q9NX14 153 aa-0.41□□□□□ -2.48
NCKAP1-204ENST00000477988 FBXL3Q9UKT7 428 aa-0.41□□□□□ -2.48
NCKAP1-204ENST00000477988 LINC00588Q9Y4M8 146 aa-0.41□□□□□ -2.48
NCKAP1-204ENST00000477988 PHLDA3Q9Y5J5 127 aa-0.41□□□□□ -2.48
NCKAP1-204ENST00000477988 ORC6Q9Y5N6 252 aa-0.41□□□□□ -2.48
NCKAP1-204ENST00000477988 HIVEP3Q5T1R4 2406 aa-0.42□□□□□ -2.48
NCKAP1-204ENST00000477988 HEATR5BQ9P2D3 2071 aa-0.42□□□□□ -2.48
NCKAP1-204ENST00000477988 TRAV8-4A0A0B4J246 113 aa-0.42□□□□□ -2.48
NCKAP1-204ENST00000477988 CACNG3O60359 315 aa-0.42□□□□□ -2.48
NCKAP1-204ENST00000477988 P01737 135 aa-0.42□□□□□ -2.48
NCKAP1-204ENST00000477988 RAP1GDS1P52306 607 aa-0.42□□□□□ -2.48
NCKAP1-204ENST00000477988 RWDD2BP57060 319 aa-0.42□□□□□ -2.48
NCKAP1-204ENST00000477988 SLC35A1P78382 337 aa-0.42□□□□□ -2.48
NCKAP1-204ENST00000477988 APOFQ13790 326 aa-0.42□□□□□ -2.48
NCKAP1-204ENST00000477988 CDK5R1Q15078 307 aa-0.42□□□□□ -2.48
NCKAP1-204ENST00000477988 MARCH3Q86UD3 253 aa-0.42□□□□□ -2.48
NCKAP1-204ENST00000477988 ZFAND2AQ8N6M9 145 aa-0.42□□□□□ -2.48
NCKAP1-204ENST00000477988 OR56A4Q8NGH8 313 aa-0.42□□□□□ -2.48
NCKAP1-204ENST00000477988 RCN3Q96D15 328 aa-0.42□□□□□ -2.48
NCKAP1-204ENST00000477988 TAPBPLQ9BX59 468 aa-0.42□□□□□ -2.48
NCKAP1-204ENST00000477988 C10orf95Q9H7T3 257 aa-0.42□□□□□ -2.48
NCKAP1-204ENST00000477988 PRO0628Q9UI54 55 aa-0.42□□□□□ -2.48
NCKAP1-204ENST00000477988 BTRCQ9Y297 605 aa-0.42□□□□□ -2.48
NCKAP1-204ENST00000477988 HEY1Q9Y5J3 304 aa-0.42□□□□□ -2.48
NCKAP1-204ENST00000477988 EML5Q05BV3 1969 aa-0.43□□□□□ -2.48
NCKAP1-204ENST00000477988 LOC389332A0A1B0GUA5 103 aa-0.43□□□□□ -2.48
NCKAP1-204ENST00000477988 SOD1P00441 154 aa-0.43□□□□□ -2.48
NCKAP1-204ENST00000477988 GYPCP04921 128 aa-0.43□□□□□ -2.48
NCKAP1-204ENST00000477988 CRYGDP07320 174 aa-0.43□□□□□ -2.48
NCKAP1-204ENST00000477988 SLC2A3P11169 496 aa-0.43□□□□□ -2.48
NCKAP1-204ENST00000477988 MRPL19P49406 292 aaKnown RBP-0.43□□□□□ -2.48
NCKAP1-204ENST00000477988 SLC38A11Q08AI6 406 aa-0.43□□□□□ -2.48
NCKAP1-204ENST00000477988 SKP2Q13309 424 aa-0.43□□□□□ -2.48
NCKAP1-204ENST00000477988 GPM6BQ13491 265 aa-0.43□□□□□ -2.48
NCKAP1-204ENST00000477988 RPEL1Q2QD12 228 aa-0.43□□□□□ -2.48
NCKAP1-204ENST00000477988 LRRC23Q53EV4 343 aaPredicted RBP-0.43□□□□□ -2.48
NCKAP1-204ENST00000477988 CLEC19AQ6UXS0 136 aa-0.43□□□□□ -2.48
NCKAP1-204ENST00000477988 LRRC28Q86X40 367 aaPredicted RBP-0.43□□□□□ -2.48
NCKAP1-204ENST00000477988 NECAB1Q8N987 351 aa-0.43□□□□□ -2.48
NCKAP1-204ENST00000477988 OR5T3Q8NGG3 340 aa-0.43□□□□□ -2.48
NCKAP1-204ENST00000477988 TCP10LQ8TDR4 215 aa-0.43□□□□□ -2.48
NCKAP1-204ENST00000477988 ELMO1Q92556 727 aa-0.43□□□□□ -2.48
NCKAP1-204ENST00000477988 MRPS24Q96EL2 167 aaKnown RBP-0.43□□□□□ -2.48
NCKAP1-204ENST00000477988 GLT1D1Q96MS3 346 aa-0.43□□□□□ -2.48
NCKAP1-204ENST00000477988 YPEL4Q96NS1 127 aa-0.43□□□□□ -2.48
NCKAP1-204ENST00000477988 PITX2Q99697 317 aa-0.43□□□□□ -2.48
NCKAP1-204ENST00000477988 PECRQ9BY49 303 aa-0.43□□□□□ -2.48
NCKAP1-204ENST00000477988 RPUSD1Q9UJJ7 312 aaKnown RBP-0.43□□□□□ -2.48
NCKAP1-204ENST00000477988 YLPM1P49750 1951 aaKnown RBP-0.44□□□□□ -2.48
NCKAP1-204ENST00000477988 IGKV2D-29A0A075B6S2 120 aaPredicted RBP-0.44□□□□□ -2.48
NCKAP1-204ENST00000477988 DHRS12A0PJE2 317 aa-0.44□□□□□ -2.48
NCKAP1-204ENST00000477988 A8MWP6 167 aa-0.44□□□□□ -2.48
NCKAP1-204ENST00000477988 UPK1AO00322 258 aa-0.44□□□□□ -2.48
NCKAP1-204ENST00000477988 GYG2O15488 501 aa-0.44□□□□□ -2.48
NCKAP1-204ENST00000477988 SPAG6O75602 509 aa-0.44□□□□□ -2.48
NCKAP1-204ENST00000477988 C1QCP02747 245 aa-0.44□□□□□ -2.48
NCKAP1-204ENST00000477988 KRT16P08779 473 aa-0.44□□□□□ -2.48
NCKAP1-204ENST00000477988 ELK4P28324 431 aa-0.44□□□□□ -2.48
NCKAP1-204ENST00000477988 GABRA6Q16445 453 aa-0.44□□□□□ -2.48
NCKAP1-204ENST00000477988 NNATQ16517 81 aa-0.44□□□□□ -2.48
NCKAP1-204ENST00000477988 UBE2NLQ5JXB2 153 aa-0.44□□□□□ -2.48
NCKAP1-204ENST00000477988 CCDC121Q6ZUS5 278 aa-0.44□□□□□ -2.48
NCKAP1-204ENST00000477988 NDUFAF7Q7L592 441 aa-0.44□□□□□ -2.48
NCKAP1-204ENST00000477988 VTCN1Q7Z7D3 282 aa-0.44□□□□□ -2.48
NCKAP1-204ENST00000477988 ZCCHC7Q8N3Z6 543 aaKnown RBP-0.44□□□□□ -2.48
NCKAP1-204ENST00000477988 CCNYL1Q8N7R7 359 aa-0.44□□□□□ -2.48
NCKAP1-204ENST00000477988 C15orf53Q8NAA6 179 aa-0.44□□□□□ -2.48
NCKAP1-204ENST00000477988 OR2M3Q8NG83 312 aa-0.44□□□□□ -2.48
NCKAP1-204ENST00000477988 CPB2Q96IY4 423 aa-0.44□□□□□ -2.48
NCKAP1-204ENST00000477988 ANAPC13Q9BS18 74 aa-0.44□□□□□ -2.48
NCKAP1-204ENST00000477988 MCUBQ9NWR8 336 aa-0.44□□□□□ -2.48
NCKAP1-204ENST00000477988 PRO2289Q9P1D8 64 aa-0.44□□□□□ -2.48
NCKAP1-204ENST00000477988 UBR5O95071 2799 aaPredicted RBP-0.44□□□□□ -2.48
NCKAP1-204ENST00000477988 PLEKHG2Q9H7P9 1386 aa-0.45□□□□□ -2.48
NCKAP1-204ENST00000477988 SLX4Q8IY92 1834 aa-0.45□□□□□ -2.48
NCKAP1-204ENST00000477988 TNRC6BQ9UPQ9 1833 aaKnown RBP-0.45□□□□□ -2.48
NCKAP1-204ENST00000477988 BRWD1Q9NSI6 2320 aa-0.45□□□□□ -2.48
NCKAP1-204ENST00000477988 HMCN2Q8NDA2 5059 aa-0.45□□□□□ -2.48
NCKAP1-204ENST00000477988 IGKV1D-42A0A075B6H8 117 aa-0.45□□□□□ -2.48
NCKAP1-204ENST00000477988 A0A0B4J2E0 115 aa-0.45□□□□□ -2.48
NCKAP1-204ENST00000477988 RNASEK-C17orf49H0YIS7 233 aa-0.45□□□□□ -2.48
NCKAP1-204ENST00000477988 TTC4O95801 387 aa-0.45□□□□□ -2.48
NCKAP1-204ENST00000477988 SOD3P08294 240 aa-0.45□□□□□ -2.48
NCKAP1-204ENST00000477988 EVI2BP34910 448 aa-0.45□□□□□ -2.48
NCKAP1-204ENST00000477988 SPAM1P38567 509 aa-0.45□□□□□ -2.48
NCKAP1-204ENST00000477988 MGAT3Q09327 533 aa-0.45□□□□□ -2.48
NCKAP1-204ENST00000477988 TSPAN31Q12999 210 aa-0.45□□□□□ -2.48
NCKAP1-204ENST00000477988 ZMYND11Q15326 602 aa-0.45□□□□□ -2.48
NCKAP1-204ENST00000477988 TTC32Q5I0X7 151 aa-0.45□□□□□ -2.48
NCKAP1-204ENST00000477988 CLLU1OSQ5K130 101 aa-0.45□□□□□ -2.48
NCKAP1-204ENST00000477988 THOC7Q6I9Y2 204 aaKnown RBP-0.45□□□□□ -2.48
NCKAP1-204ENST00000477988 AGTRAPQ6RW13 159 aa-0.45□□□□□ -2.48
NCKAP1-204ENST00000477988 NDNFQ8TB73 568 aa-0.45□□□□□ -2.48
NCKAP1-204ENST00000477988 UBA3Q8TBC4 463 aa-0.45□□□□□ -2.48
NCKAP1-204ENST00000477988 C22orf15Q8WYQ4 148 aa-0.45□□□□□ -2.48
NCKAP1-204ENST00000477988 NT5C3BQ969T7 300 aa-0.45□□□□□ -2.48
NCKAP1-204ENST00000477988 ZBTB18Q99592 522 aa-0.45□□□□□ -2.48
NCKAP1-204ENST00000477988 NABP2Q9BQ15 211 aa-0.45□□□□□ -2.48
NCKAP1-204ENST00000477988 STK38LQ9Y2H1 464 aa-0.45□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms