RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 PTAFRP25105 342 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 RPL23AP62750 156 aaKnown RBP8.5□□□□□ -1.05
CMC1-209ENST00000477739 DHODHQ02127 395 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 HIST2H3PS2Q5TEC6 136 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 AADACL3Q5VUY0 350 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 SLC35G3Q8N808 338 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 EDAQ92838 391 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 CPNE4Q96A23 557 aaPredicted RBP8.5□□□□□ -1.05
CMC1-209ENST00000477739 PLK3Q9H4B4 646 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 UNKLQ9H9P5 680 aaKnown RBP8.5□□□□□ -1.05
CMC1-209ENST00000477739 BARX1Q9HBU1 254 aaPredicted RBP8.5□□□□□ -1.05
CMC1-209ENST00000477739 C19orf12Q9NSK7 152 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 ST8SIA3O43173 380 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 GSK3AP49840 483 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 RBP2P50120 134 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 STARD6P59095 220 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 PLPPR5Q32ZL2 321 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 C1orf100Q5SVJ3 147 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 EMG1Q92979 244 aaKnown RBP8.5□□□□□ -1.05
CMC1-209ENST00000477739 RPUSD4Q96CM3 377 aaKnown RBP8.5□□□□□ -1.05
CMC1-209ENST00000477739 LYZL4Q96KX0 146 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 HIST1H2AAQ96QV6 131 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 ALX4Q9H161 411 aaPredicted RBP8.5□□□□□ -1.05
CMC1-209ENST00000477739 IFT22Q9H7X7 185 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 ANXA10Q9UJ72 324 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 TMEM14DPA8MWL7 114 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 NDUFS6O75380 124 aaKnown RBP8.5□□□□□ -1.05
CMC1-209ENST00000477739 METTL15P1P0C7V9 234 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 PGA4P0DJD7 388 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 PGA3P0DJD8 388 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 NKX2-1P43699 371 aaPredicted RBP8.5□□□□□ -1.05
CMC1-209ENST00000477739 SULT1A1P50225 295 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 CARD18P57730 90 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 SPINK14Q6IE38 97 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 FAM166AQ6J272 317 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 ZNF880Q6PDB4 577 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 ARRDC1Q8N5I2 433 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 THOC3Q96J01 351 aaKnown RBP8.5□□□□□ -1.05
CMC1-209ENST00000477739 HINT2Q9BX68 163 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 SLC17A5Q9NRA2 495 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 CYTL1Q9NRR1 136 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 FZR1Q9UM11 496 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 SERPINE2P07093 398 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 GSTP1P09211 210 aaKnown RBP8.49□□□□□ -1.05
CMC1-209ENST00000477739 SNRPCP09234 159 aaKnown RBP8.49□□□□□ -1.05
CMC1-209ENST00000477739 RAB2AP61019 212 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 SPANXN5Q5MJ07 72 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 WDR25Q64LD2 544 aaPredicted RBP8.49□□□□□ -1.05
CMC1-209ENST00000477739 DEGS2Q6QHC5 323 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 MAML2Q8IZL2 1156 aaPredicted RBP8.49□□□□□ -1.05
CMC1-209ENST00000477739 LGI3Q8N145 548 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 LILRB2Q8N423 598 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 DTWD2Q8NBA8 298 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 NFAM1Q8NET5 270 aaPredicted RBP8.49□□□□□ -1.05
CMC1-209ENST00000477739 POC1BQ8TC44 478 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 OCSTAMPQ9BR26 566 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 RSG1Q9BU20 258 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 LIME1Q9H400 295 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 GAB2Q9UQC2 676 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 MED13Q9UHV7 2174 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 A0A0J9YW62 118 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 C10orf142B7Z368 130 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 PDGFBP01127 241 aaPredicted RBP8.49□□□□□ -1.05
CMC1-209ENST00000477739 P04436 131 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 SCTP09683 121 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 H2AFB1P0C5Y9 115 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 SLC25A4P12235 298 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 FABP4P15090 132 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 SHBQ15464 509 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 ADIRFQ15847 76 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 GFI1BQ5VTD9 330 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 SSX9Q7RTT3 188 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 RPS19BP1Q86WX3 136 aaKnown RBP8.49□□□□□ -1.05
CMC1-209ENST00000477739 AGBL5Q8NDL9 886 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 OXGR1Q96P68 337 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 TMEM204Q9BSN7 226 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 RAB18Q9NP72 206 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 UFSP2Q9NUQ7 469 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 PISDQ9UG56 409 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 MGAQ8IWI9 3026 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 CEBPZOSA8MTT3 80 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 SIRPB1O00241 398 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 JTBO76095 146 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 CSRP1P21291 193 aaKnown RBP8.49□□□□□ -1.05
CMC1-209ENST00000477739 ALDH3B1P43353 468 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 SLC35A1P78382 337 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 PLGLB1Q02325 96 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 ZNF92Q03936 586 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 ZP4Q12836 540 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 CDPF1Q6NVV7 123 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 OPN5Q6U736 354 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 TMPRSS7Q7RTY8 843 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 MRPL21Q7Z2W9 205 aaKnown RBP8.49□□□□□ -1.05
CMC1-209ENST00000477739 OR56B2PQ8NGI1 322 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 HIST1H2BAQ96A08 127 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 POM121Q96HA1 1249 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 HES7Q9BYE0 225 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 ZNF286AQ9HBT8 521 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 CCL28Q9NRJ3 127 aa8.49□□□□□ -1.05
CMC1-209ENST00000477739 NECAP2Q9NVZ3 263 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms