RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 CCDC144NLQ6NUI1 221 aa5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 ZNF322Q6U7Q0 402 aaPredicted RBP5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 SLC35E3Q7Z769 313 aa5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 RTN4RL2Q86UN3 420 aa5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 FOXRED2Q8IWF2 684 aa5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 SLC35F2Q8IXU6 374 aa5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 ENTHD1Q8IYW4 607 aa5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 OR52N4Q8NGI2 321 aa5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 OR5M8Q8NGP6 311 aa5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 OR14K1Q8NGZ2 314 aa5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 OR56B4Q8NH76 319 aa5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 MUC7Q8TAX7 377 aa5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 ITFG2Q969R8 447 aa5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 RFT1Q96AA3 541 aa5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 CREB3L1Q96BA8 519 aa5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 HRASLS5Q96KN8 279 aa5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 TBX5Q99593 518 aa5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 CCDC134Q9H6E4 229 aa5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 NEK6Q9HC98 313 aa5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 EXOSC4Q9NPD3 245 aaKnown RBP5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 H2AFY2Q9P0M6 372 aaPredicted RBP5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 ACTR3BQ9P1U1 418 aa5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 TAGLN3Q9UI15 199 aa5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 GSTK1Q9Y2Q3 226 aa5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 SNX5Q9Y5X3 404 aa5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 R4GMQ9 66 aa5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 RYR3Q15413 4870 aa5.29□□□□□ -1.56
RTFDC1-206ENST00000477485 IGKV1-27A0A075B6S5 117 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 A0A1B0GTI1 187 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 TCRBV5S2A0A599 114 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 NCBP2LA6PVI3 153 aaKnown RBP5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 ZNF670-ZNF695F2Z2N8 137 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 BUB1B-PAK6H3BSN5 160 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 CCL24O00175 119 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 HSPB6O14558 160 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 SH2D1BO14796 132 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 ZFPL1O95159 310 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 SERPINA3P01011 423 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 IGKV1D-33P01593 117 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 IGKV1-33P01594 117 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 KRT8P05787 483 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 LYL1P12980 280 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 OSMP13725 252 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 SLC2A5P22732 501 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 GDNFP39905 211 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 GLP1RP43220 463 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 GLIPR1P48060 266 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 GNG10P50151 68 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 MNAT1P51948 309 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 FUT6P51993 359 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 ATP1B3P54709 279 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 GP2P55259 537 aaKnown RBP5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 ROM1Q03395 351 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 ZNF91Q05481 1191 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 ATXN7L3Q14CW9 347 aaPredicted RBP5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 UBE2V2Q15819 145 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 ZNF260Q3ZCT1 412 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 KRBOX4Q5JUW0 171 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 NKAPLQ5M9Q1 402 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 CASC10Q5T4H9 136 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 TMEM42Q69YG0 159 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 ZFAND6Q6FIF0 208 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 CD300LDQ6UXZ3 194 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 LCNL1Q6ZST4 164 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 MEPCEQ7L2J0 689 aaKnown RBP5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 KRT74Q7RTS7 529 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 Q8IYB0 196 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 ELMOD2Q8IZ81 293 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 HS3ST5Q8IZT8 346 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 FAM58AQ8N1B3 248 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 DRAM1Q8N682 238 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 OR8U1Q8NH10 309 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 LEAP2Q969E1 77 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 CCDC124Q96CT7 223 aaKnown RBP5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 RAX2Q96IS3 184 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 P2RX4Q99571 388 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 ZFP57Q9NU63 452 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 ARL8BQ9NVJ2 186 aa5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 AMMECR1Q9Y4X0 333 aaPredicted RBP5.28□□□□□ -1.56
RTFDC1-206ENST00000477485 CCDC182A6NF36 153 aa5.27□□□□□ -1.57
RTFDC1-206ENST00000477485 M0R129 80 aa5.27□□□□□ -1.57
RTFDC1-206ENST00000477485 ENTPD6O75354 484 aa5.27□□□□□ -1.57
RTFDC1-206ENST00000477485 SRSF10O75494 262 aaKnown RBP5.27□□□□□ -1.57
RTFDC1-206ENST00000477485 OR2H2O95918 312 aa5.27□□□□□ -1.57
RTFDC1-206ENST00000477485 IGLV1-47P01700 117 aa5.27□□□□□ -1.57
RTFDC1-206ENST00000477485 RPLP1P05386 114 aaKnown RBP5.27□□□□□ -1.57
RTFDC1-206ENST00000477485 RAP2AP10114 183 aa5.27□□□□□ -1.57
RTFDC1-206ENST00000477485 ZNF20P17024 532 aa5.27□□□□□ -1.57
RTFDC1-206ENST00000477485 PRKACGP22612 351 aa5.27□□□□□ -1.57
RTFDC1-206ENST00000477485 SLC6A1P30531 599 aa5.27□□□□□ -1.57
RTFDC1-206ENST00000477485 RBP2P50120 134 aa5.27□□□□□ -1.57
RTFDC1-206ENST00000477485 MTCP1P56278 107 aa5.27□□□□□ -1.57
RTFDC1-206ENST00000477485 CDK5Q00535 292 aa5.27□□□□□ -1.57
RTFDC1-206ENST00000477485 SPATS1Q496A3 300 aa5.27□□□□□ -1.57
RTFDC1-206ENST00000477485 CXorf66Q5JRM2 361 aaPredicted RBP5.27□□□□□ -1.57
RTFDC1-206ENST00000477485 SPIN3Q5JUX0 258 aa5.27□□□□□ -1.57
RTFDC1-206ENST00000477485 TEX38Q6PEX7 206 aa5.27□□□□□ -1.57
RTFDC1-206ENST00000477485 HEPN1Q6WQI6 88 aa5.27□□□□□ -1.57
RTFDC1-206ENST00000477485 OVCH2Q7RTZ1 564 aa5.27□□□□□ -1.57
RTFDC1-206ENST00000477485 BCDIN3DQ7Z5W3 292 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms