RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, human

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5A-208	ENST00000476544	UBE2E1	P51965	193 aa		11.14	□□□□□ -0.63
RAB5A-208	ENST00000476544		Q499Y3	187 aa		11.14	□□□□□ -0.63
RAB5A-208	ENST00000476544	YIF1B	Q5BJH7	314 aa		11.14	□□□□□ -0.63
RAB5A-208	ENST00000476544	SATL1	Q86VE3	508 aa		11.14	□□□□□ -0.63
RAB5A-208	ENST00000476544		Q8IYB0	196 aa		11.14	□□□□□ -0.63
RAB5A-208	ENST00000476544	OR8H2	Q8N162	312 aa		11.14	□□□□□ -0.63
RAB5A-208	ENST00000476544	ASCC1	Q8N9N2	400 aa	Known RBP	11.14	□□□□□ -0.63
RAB5A-208	ENST00000476544	OR10K1	Q8NGX5	313 aa		11.14	□□□□□ -0.63
RAB5A-208	ENST00000476544	JMJD8	Q96S16	334 aa		11.14	□□□□□ -0.63
RAB5A-208	ENST00000476544	CHST6	Q9GZX3	395 aa		11.14	□□□□□ -0.63
RAB5A-208	ENST00000476544	NOX4	Q9NPH5	578 aa		11.14	□□□□□ -0.63
RAB5A-208	ENST00000476544	TMEM138	Q9NPI0	162 aa		11.14	□□□□□ -0.63
RAB5A-208	ENST00000476544	TRAV24	A0A0B4J272	114 aa		11.13	□□□□□ -0.63
RAB5A-208	ENST00000476544	MEGF11	A6BM72	1044 aa		11.13	□□□□□ -0.63
RAB5A-208	ENST00000476544	NPFF	O15130	113 aa		11.13	□□□□□ -0.63
RAB5A-208	ENST00000476544	MMP23A	O75900	390 aa		11.13	□□□□□ -0.63
RAB5A-208	ENST00000476544	RNASE1	P07998	156 aa	Known RBP	11.13	□□□□□ -0.63
RAB5A-208	ENST00000476544	CGB3	P0DN86	165 aa		11.13	□□□□□ -0.63
RAB5A-208	ENST00000476544	CGB7	P0DN87	165 aa		11.13	□□□□□ -0.63
RAB5A-208	ENST00000476544	PAX6	P26367	422 aa		11.13	□□□□□ -0.63
RAB5A-208	ENST00000476544	OR3A4P	P47883	348 aa		11.13	□□□□□ -0.63
RAB5A-208	ENST00000476544	COMP	P49747	757 aa	Predicted RBP	11.13	□□□□□ -0.63
RAB5A-208	ENST00000476544	C16orf87	Q6PH81	154 aa		11.13	□□□□□ -0.63
RAB5A-208	ENST00000476544	RBMS3	Q6XE24	437 aa	Known RBP	11.13	□□□□□ -0.63
RAB5A-208	ENST00000476544	CMTM4	Q8IZR5	234 aa		11.13	□□□□□ -0.63
RAB5A-208	ENST00000476544	OR5D13	Q8NGL4	314 aa		11.13	□□□□□ -0.63
RAB5A-208	ENST00000476544	MYDGF	Q969H8	173 aa		11.13	□□□□□ -0.63
RAB5A-208	ENST00000476544	CYYR1	Q96J86	154 aa		11.13	□□□□□ -0.63
RAB5A-208	ENST00000476544	DERL3	Q96Q80	235 aa		11.13	□□□□□ -0.63
RAB5A-208	ENST00000476544	OR14A2	Q96R54	314 aa		11.13	□□□□□ -0.63
RAB5A-208	ENST00000476544	ERGIC3	Q9Y282	383 aa		11.13	□□□□□ -0.63
RAB5A-208	ENST00000476544	ANK2	Q01484	3957 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	SIRPB1	O00241	398 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	SLC33A1	O00400	549 aa	Predicted RBP	11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	SH2D1B	O14796	132 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	CYB5A	P00167	134 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	IGHV4-59	P01825	116 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	ZNF728	P0DKX0	622 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	HKR1	P10072	659 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	CD37	P11049	281 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	ERP29	P30040	261 aa	Known RBP	11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	MAP2K4	P45985	399 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	IER3	P46695	156 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	GLIPR1	P48060	266 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	RELB	Q01201	579 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	BDH1	Q02338	343 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	MED21	Q13503	144 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	SPHAR	Q15513	63 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	GRK1	Q15835	563 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	SPIN3	Q5JUX0	258 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	UTF1	Q5T230	341 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	FAM27D1	Q5T7N8	215 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	BAIAP2L2	Q6UXY1	529 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	OR51T1	Q8NGJ9	327 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	PIFO	Q8TCI5	191 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	TNFAIP8L1	Q8WVP5	186 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	ZDHHC16	Q969W1	377 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	COQ2	Q96H96	371 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	CHIA	Q9BZP6	476 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	RHOF	Q9HBH0	211 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	TNFRSF19	Q9NS68	423 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544	SCN3B	Q9NY72	215 aa		11.12	□□□□□ -0.63
RAB5A-208	ENST00000476544		A0A1W2PP11	408 aa		11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	FAM90A8P	A6NJQ4	464 aa		11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	HAX1	O00165	279 aa		11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	MGST3	O14880	152 aa		11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	DEGS1	O15121	323 aa		11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	SC5D	O75845	299 aa		11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	CD2	P06729	351 aa		11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	OCM	P0CE72	109 aa	Predicted RBP	11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	GABRR1	P24046	479 aa		11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	BDKRB2	P30411	391 aa		11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	SAA4	P35542	130 aa		11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	GDNF	P39905	211 aa		11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	EDDM3B	P56851	147 aa		11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	TAS2R43	P59537	309 aa		11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	MEF2C	Q06413	473 aa	Predicted RBP	11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	SCN1B	Q07699	218 aa		11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	AES	Q08117	197 aa		11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	TAF9	Q16594	264 aa		11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	ACSM3	Q53FZ2	586 aa		11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	TMEM91	Q6ZNR0	172 aa		11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	LDLRAD3	Q86YD5	345 aa		11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	DYNAP	Q8N1N2	210 aa		11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	TBC1D15	Q8TC07	691 aa		11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	CORO2A	Q92828	525 aa		11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	NR1H4	Q96RI1	486 aa	Predicted RBP	11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	NEK6	Q9HC98	313 aa		11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	ING4	Q9UNL4	249 aa		11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	SF3B6	Q9Y3B4	125 aa	Known RBP	11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	TPRKB	Q9Y3C4	175 aa		11.11	□□□□□ -0.63
RAB5A-208	ENST00000476544	FBN3	Q75N90	2809 aa		11.1	□□□□□ -0.63
RAB5A-208	ENST00000476544	FAM181B	A6NEQ2	426 aa		11.1	□□□□□ -0.63
RAB5A-208	ENST00000476544	MYL12B	O14950	172 aa		11.1	□□□□□ -0.63
RAB5A-208	ENST00000476544	ZNF93	P35789	620 aa	Predicted RBP	11.1	□□□□□ -0.63
RAB5A-208	ENST00000476544	MTNR1B	P49286	362 aa		11.1	□□□□□ -0.63
RAB5A-208	ENST00000476544	P2RX3	P56373	397 aa		11.1	□□□□□ -0.63
RAB5A-208	ENST00000476544	TPBG	Q13641	420 aa		11.1	□□□□□ -0.63
RAB5A-208	ENST00000476544	EDDM3A	Q14507	147 aa		11.1	□□□□□ -0.63
RAB5A-208	ENST00000476544	PIGY	Q3MUY2	71 aa		11.1	□□□□□ -0.63

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