RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 SERPINA7P05543 415 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 CA6P23280 308 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 NKX2-1P43699 371 aaPredicted RBP4.36□□□□□ -1.71
CCDC39-204ENST00000476379 OR2F1Q13607 317 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 GUK1Q16774 197 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 LY6G6FQ5SQ64 297 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 CATSPERDQ86XM0 798 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 LGI3Q8N145 548 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 PLPP5Q8NEB5 264 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 OR13G1Q8NGZ3 307 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 SLC25A43Q8WUT9 341 aaPredicted RBP4.36□□□□□ -1.71
CCDC39-204ENST00000476379 TMEM9BQ9NQ34 198 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 DCHS2Q6V1P9 2916 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 CCDC187A0A096LP49 1063 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 A0A1W2PRD5 423 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 A0A1W2PRF3 423 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 A0A1W2PRM7 423 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 CD300LBA8K4G0 201 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 ALG1L2C9J202 215 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 LMO7DNF2Z398 122 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 MS4A18H0YCH9 400 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 H0YIZ8 118 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 H0YL77 283 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 DHHO43323 396 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 TNFSF15O95150 251 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 IFNA17P01571 189 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 S100GP29377 79 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 SLC35B1P78383 322 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 CYCSP99999 105 aaKnown RBP4.36□□□□□ -1.71
CCDC39-204ENST00000476379 TRIP6Q15654 476 aaKnown RBP4.36□□□□□ -1.71
CCDC39-204ENST00000476379 MS4A18Q3C1V0 323 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 PABPC1L2AQ5JQF8 200 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 CXorf66Q5JRM2 361 aaPredicted RBP4.36□□□□□ -1.71
CCDC39-204ENST00000476379 HACD4Q5VWC8 232 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 JMJD6Q6NYC1 403 aaPredicted RBP4.36□□□□□ -1.71
CCDC39-204ENST00000476379 CMTM1Q8IZ96 169 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 SNX22Q96L94 193 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 SOSTQ9BQB4 213 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 RSG1Q9BU20 258 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 NPDC1Q9NQX5 325 aaPredicted RBP4.36□□□□□ -1.71
CCDC39-204ENST00000476379 GFOD1Q9NXC2 390 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 HAO2Q9NYQ3 351 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 IL17BQ9UHF5 180 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 MCTS1Q9ULC4 181 aaKnown RBP4.36□□□□□ -1.71
CCDC39-204ENST00000476379 A0A0G2JMM0 328 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 A0A1W2PPB8 328 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 A0A1W2PRS3 328 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 RNF222A6NCQ9 220 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 NKX2-6A6NCS4 301 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 KIR3DP1A8MWS1 328 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF732B4DXR9 585 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 TRAPPC2LH3BP13 241 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 MSTNO14793 375 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 GP1BAP07359 652 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 H2AFB1P0C5Y9 115 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 TMEM11P17152 192 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 CHATP28329 748 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 FOLR3P41439 243 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 RBP2P50120 134 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 RAB13P51153 203 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 ERVS71-1P61550 626 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 EIF5AP63241 154 aaKnown RBP4.36□□□□□ -1.71
CCDC39-204ENST00000476379 GJC3Q8NFK1 279 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 FLVCR1-AS1Q8TAF5 88 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 PRRX2Q99811 253 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 SARGQ9BW04 601 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 LPAR5Q9H1C0 372 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 SLC25A22Q9H936 323 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 FAM212BQ9NTI7 297 aaPredicted RBP4.36□□□□□ -1.71
CCDC39-204ENST00000476379 ZFP57Q9NU63 452 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 SERTAD4Q9NUC0 356 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 WIF1Q9Y5W5 379 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 LHFPL6Q9Y693 200 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 YLPM1P49750 1951 aaKnown RBP4.36□□□□□ -1.71
CCDC39-204ENST00000476379 A0A087WZY1 265 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 IGLV1-36A0A0B4J1U3 117 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 UBE2L5PA0A1B0GUS4 154 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 KIAA1324LA8MWY0 1029 aaPredicted RBP4.35□□□□□ -1.71
CCDC39-204ENST00000476379 E9PLN8 166 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 ST8SIA3O43173 380 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 LYZL6O75951 148 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 MT-ATP6P00846 226 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 IGHV3-48P01763 117 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 CRYAAP02489 173 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 SMIM10L1P0DMW3 83 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 HOXC12P31275 282 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 SSR4P51571 173 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 RHEBQ15382 184 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 UBE2V2Q15819 145 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 ABHD17BQ5VST6 288 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 NSUN5P2Q63ZY6 315 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 ANKRD37Q7Z713 158 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 TMEM229BQ8NBD8 167 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 NOXO1Q8NFA2 376 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 SAP25Q8TEE9 199 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 ASB10Q8WXI3 467 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 EMG1Q92979 244 aaKnown RBP4.35□□□□□ -1.71
CCDC39-204ENST00000476379 NINJ1Q92982 152 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 SMIM10Q96HG1 83 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF286AQ9HBT8 521 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms