RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 ZNF714Q96N38 554 aa9.1□□□□□ -0.95
CKS1B-206ENST00000474215 CHST6Q9GZX3 395 aa9.1□□□□□ -0.95
CKS1B-206ENST00000474215 MEGF9Q9H1U4 602 aa9.1□□□□□ -0.95
CKS1B-206ENST00000474215 EXOSC4Q9NPD3 245 aaKnown RBP9.1□□□□□ -0.95
CKS1B-206ENST00000474215 CHCHD3Q9NX63 227 aaKnown RBP9.1□□□□□ -0.95
CKS1B-206ENST00000474215 GSTK1Q9Y2Q3 226 aa9.1□□□□□ -0.95
CKS1B-206ENST00000474215 EXOSC1Q9Y3B2 195 aaKnown RBP9.1□□□□□ -0.95
CKS1B-206ENST00000474215 SIRT4Q9Y6E7 314 aaPredicted RBP9.1□□□□□ -0.95
CKS1B-206ENST00000474215 H3BUX3 64 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 SIRPB1O00241 398 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 CASQ2O14958 399 aaPredicted RBP9.09□□□□□ -0.95
CKS1B-206ENST00000474215 MAGEB3O15480 346 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 OR2H2O95918 312 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 CD2P06729 351 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 GNAO1P09471 354 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 IGHV1-8P0DP01 117 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 LMO1P25800 156 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 ERP29P30040 261 aaKnown RBP9.09□□□□□ -0.95
CKS1B-206ENST00000474215 TGFBR2P37173 567 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 CAPGP40121 348 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 OR3A1P47881 315 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 SOX2P48431 317 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 BMXP51813 675 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 ZP1P60852 638 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 SCN1BQ07699 218 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 ST3GAL4Q11206 333 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 CDK5R1Q15078 307 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 AANATQ16613 207 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 C8orf59Q8N0T1 100 aaPredicted RBP9.09□□□□□ -0.95
CKS1B-206ENST00000474215 TPRX1Q8N7U7 411 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 OR11H6Q8NGC7 330 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 OR13D1Q8NGV5 346 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 OR52N1Q8NH53 320 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 LINC01006Q8NI28 216 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 RPS4Y2Q8TD47 263 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 GGHQ92820 318 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 CPNE2Q96FN4 548 aaPredicted RBP9.09□□□□□ -0.95
CKS1B-206ENST00000474215 SSX3Q99909 188 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 ZNF696Q9H7X3 374 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 CLEC2DQ9UHP7 191 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 RNF114Q9Y508 228 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 LINC00312Q9Y6C7 94 aa9.09□□□□□ -0.95
CKS1B-206ENST00000474215 A0A0G2JK05 382 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 EFCAB10A6NFE3 127 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 FAM90A8PA6NJQ4 464 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 DEGS1O15121 323 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 P2RX3P56373 397 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 LRRC75BQ2VPJ9 315 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 PRR31Q5SQ13 230 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 ELP2Q6IA86 826 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 DHRS7BQ6IAN0 325 aaPredicted RBP9.08□□□□□ -0.96
CKS1B-206ENST00000474215 ASPHD2Q6ICH7 369 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 Q6ZSV7 163 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 TCF23Q7RTU1 214 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 LHFPL4Q7Z7J7 247 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 SATL1Q86VE3 508 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 CHST4Q8NCG5 386 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 ZNF485Q8NCK3 441 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 PXT1Q8NFP0 134 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 WFDC12Q8WWY7 111 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 GHSRQ92847 366 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 TMEM106AQ96A25 262 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 SMIM19Q96E16 107 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 GPER1Q99527 375 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 PPA2Q9H2U2 334 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 C16orf95Q9H693 158 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 DCLRE1BQ9H816 532 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 PLCXD1Q9NUJ7 323 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 TAS2R4Q9NYW5 299 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 ZNF281Q9Y2X9 895 aa9.08□□□□□ -0.96
CKS1B-206ENST00000474215 UBE2J1Q9Y385 318 aaPredicted RBP9.08□□□□□ -0.96
CKS1B-206ENST00000474215 TRGV10A0A0A0MS01 117 aa9.07□□□□□ -0.96
CKS1B-206ENST00000474215 FUOMA2VDF0 154 aa9.07□□□□□ -0.96
CKS1B-206ENST00000474215 ODF3BA8MYP8 253 aa9.07□□□□□ -0.96
CKS1B-206ENST00000474215 GABRPO00591 440 aa9.07□□□□□ -0.96
CKS1B-206ENST00000474215 TSPAN9O75954 239 aa9.07□□□□□ -0.96
CKS1B-206ENST00000474215 LALBAP00709 142 aa9.07□□□□□ -0.96
CKS1B-206ENST00000474215 ALDOBP05062 364 aa9.07□□□□□ -0.96
CKS1B-206ENST00000474215 ARG1P05089 322 aa9.07□□□□□ -0.96
CKS1B-206ENST00000474215 ZNF44P15621 663 aa9.07□□□□□ -0.96
CKS1B-206ENST00000474215 PAX6P26367 422 aa9.07□□□□□ -0.96
CKS1B-206ENST00000474215 MTNR1BP49286 362 aa9.07□□□□□ -0.96
CKS1B-206ENST00000474215 AESQ08117 197 aa9.07□□□□□ -0.96
CKS1B-206ENST00000474215 SRSF4Q08170 494 aaKnown RBP9.07□□□□□ -0.96
CKS1B-206ENST00000474215 DYNC1I2Q13409 638 aaKnown RBP9.07□□□□□ -0.96
CKS1B-206ENST00000474215 ZNF626Q68DY1 528 aa9.07□□□□□ -0.96
CKS1B-206ENST00000474215 DMKNQ6E0U4 476 aaPredicted RBP9.07□□□□□ -0.96
CKS1B-206ENST00000474215 LAIR2Q6ISS4 152 aa9.07□□□□□ -0.96
CKS1B-206ENST00000474215 Q6P435 159 aa9.07□□□□□ -0.96
CKS1B-206ENST00000474215 ASCL4Q6XD76 172 aa9.07□□□□□ -0.96
CKS1B-206ENST00000474215 TRAPPC6BQ86SZ2 158 aa9.07□□□□□ -0.96
CKS1B-206ENST00000474215 OR51A2Q8NGJ7 313 aa9.07□□□□□ -0.96
CKS1B-206ENST00000474215 PIFOQ8TCI5 191 aa9.07□□□□□ -0.96
CKS1B-206ENST00000474215 FBLIM1Q8WUP2 373 aa9.07□□□□□ -0.96
CKS1B-206ENST00000474215 TNFAIP8L1Q8WVP5 186 aa9.07□□□□□ -0.96
CKS1B-206ENST00000474215 TFAP2CQ92754 450 aa9.07□□□□□ -0.96
CKS1B-206ENST00000474215 CORO2AQ92828 525 aa9.07□□□□□ -0.96
CKS1B-206ENST00000474215 MALSU1Q96EH3 234 aa9.07□□□□□ -0.96
CKS1B-206ENST00000474215 VCXQ9H320 206 aa9.07□□□□□ -0.96
CKS1B-206ENST00000474215 TMEM138Q9NPI0 162 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms