RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 CLPSL1A2RUU4 121 aa14.57□□□□□ -0.08
UPF3A-203ENST00000474056 H3BUX3 64 aa14.57□□□□□ -0.08
UPF3A-203ENST00000474056 LALBAP00709 142 aa14.57□□□□□ -0.08
UPF3A-203ENST00000474056 GNAO1P09471 354 aa14.57□□□□□ -0.08
UPF3A-203ENST00000474056 IGHV1-8P0DP01 117 aa14.57□□□□□ -0.08
UPF3A-203ENST00000474056 CAPGP40121 348 aa14.57□□□□□ -0.08
UPF3A-203ENST00000474056 MEF2CQ06413 473 aaPredicted RBP14.57□□□□□ -0.08
UPF3A-203ENST00000474056 DHRS7BQ6IAN0 325 aaPredicted RBP14.57□□□□□ -0.08
UPF3A-203ENST00000474056 TMPRSS11AQ6ZMR5 421 aa14.57□□□□□ -0.08
UPF3A-203ENST00000474056 Q6ZSV7 163 aa14.57□□□□□ -0.08
UPF3A-203ENST00000474056 LHFPL4Q7Z7J7 247 aa14.57□□□□□ -0.08
UPF3A-203ENST00000474056 SAXO1Q8IYX7 474 aa14.57□□□□□ -0.08
UPF3A-203ENST00000474056 ZSCAN4Q8NAM6 433 aaPredicted RBP14.57□□□□□ -0.08
UPF3A-203ENST00000474056 OR5R1Q8NH85 324 aa14.57□□□□□ -0.08
UPF3A-203ENST00000474056 GGHQ92820 318 aa14.57□□□□□ -0.08
UPF3A-203ENST00000474056 MEGF9Q9H1U4 602 aa14.57□□□□□ -0.08
UPF3A-203ENST00000474056 TAS2R4Q9NYW5 299 aa14.57□□□□□ -0.08
UPF3A-203ENST00000474056 LINC00312Q9Y6C7 94 aa14.57□□□□□ -0.08
UPF3A-203ENST00000474056 hADV38S2A0JD32 116 aa14.56□□□□□ -0.08
UPF3A-203ENST00000474056 SH2D1BO14796 132 aa14.56□□□□□ -0.08
UPF3A-203ENST00000474056 MGST3O14880 152 aa14.56□□□□□ -0.08
UPF3A-203ENST00000474056 RBP4P02753 201 aa14.56□□□□□ -0.08
UPF3A-203ENST00000474056 TMEM225BP0DP42 221 aa14.56□□□□□ -0.08
UPF3A-203ENST00000474056 MYL12AP19105 171 aa14.56□□□□□ -0.08
UPF3A-203ENST00000474056 RAB3AP20336 220 aa14.56□□□□□ -0.08
UPF3A-203ENST00000474056 LGALS4P56470 323 aa14.56□□□□□ -0.08
UPF3A-203ENST00000474056 LAIR2Q6ISS4 152 aa14.56□□□□□ -0.08
UPF3A-203ENST00000474056 ZNF529Q6P280 563 aa14.56□□□□□ -0.08
UPF3A-203ENST00000474056 LINC01006Q8NI28 216 aa14.56□□□□□ -0.08
UPF3A-203ENST00000474056 PPP1R35Q8TAP8 253 aa14.56□□□□□ -0.08
UPF3A-203ENST00000474056 GPR148Q8TDV2 347 aa14.56□□□□□ -0.08
UPF3A-203ENST00000474056 SMIM19Q96E16 107 aa14.56□□□□□ -0.08
UPF3A-203ENST00000474056 TMEM80Q96HE8 168 aa14.56□□□□□ -0.08
UPF3A-203ENST00000474056 NKX3-1Q99801 234 aaPredicted RBP14.56□□□□□ -0.08
UPF3A-203ENST00000474056 RNF114Q9Y508 228 aa14.56□□□□□ -0.08
UPF3A-203ENST00000474056 HSPE1-MOB4S4R3N1 261 aa14.56□□□□□ -0.08
UPF3A-203ENST00000474056 ODF3BA8MYP8 253 aa14.55□□□□□ -0.08
UPF3A-203ENST00000474056 GABRPO00591 440 aa14.55□□□□□ -0.08
UPF3A-203ENST00000474056 OGG1O15527 345 aa14.55□□□□□ -0.08
UPF3A-203ENST00000474056 XPNPEP2O43895 674 aa14.55□□□□□ -0.08
UPF3A-203ENST00000474056 ZNF44P15621 663 aa14.55□□□□□ -0.08
UPF3A-203ENST00000474056 ERP29P30040 261 aaKnown RBP14.55□□□□□ -0.08
UPF3A-203ENST00000474056 LY6EQ16553 131 aa14.55□□□□□ -0.08
UPF3A-203ENST00000474056 LRRC75BQ2VPJ9 315 aa14.55□□□□□ -0.08
UPF3A-203ENST00000474056 Q6P435 159 aa14.55□□□□□ -0.08
UPF3A-203ENST00000474056 C8orf59Q8N0T1 100 aaPredicted RBP14.55□□□□□ -0.08
UPF3A-203ENST00000474056 DYNAPQ8N1N2 210 aa14.55□□□□□ -0.08
UPF3A-203ENST00000474056 OR13C5Q8NGS8 318 aa14.55□□□□□ -0.08
UPF3A-203ENST00000474056 OR13D1Q8NGV5 346 aa14.55□□□□□ -0.08
UPF3A-203ENST00000474056 OR52N1Q8NH53 320 aa14.55□□□□□ -0.08
UPF3A-203ENST00000474056 TMEM106AQ96A25 262 aa14.55□□□□□ -0.08
UPF3A-203ENST00000474056 PPA2Q9H2U2 334 aa14.55□□□□□ -0.08
UPF3A-203ENST00000474056 ZNF696Q9H7X3 374 aa14.55□□□□□ -0.08
UPF3A-203ENST00000474056 RHOFQ9HBH0 211 aa14.55□□□□□ -0.08
UPF3A-203ENST00000474056 BABAM2Q9NXR7 383 aa14.55□□□□□ -0.08
UPF3A-203ENST00000474056 CMYA5Q8N3K9 4069 aa14.55□□□□□ -0.08
UPF3A-203ENST00000474056 WNK1Q9H4A3 2382 aa14.55□□□□□ -0.08
UPF3A-203ENST00000474056 MGAM2Q2M2H8 2515 aa14.54□□□□□ -0.08
UPF3A-203ENST00000474056 FAM90A8PA6NJQ4 464 aa14.54□□□□□ -0.08
UPF3A-203ENST00000474056 ARG1P05089 322 aa14.54□□□□□ -0.08
UPF3A-203ENST00000474056 CD2P06729 351 aa14.54□□□□□ -0.08
UPF3A-203ENST00000474056 LMO1P25800 156 aa14.54□□□□□ -0.08
UPF3A-203ENST00000474056 P2RX3P56373 397 aa14.54□□□□□ -0.08
UPF3A-203ENST00000474056 KRTAP10-3P60369 221 aa14.54□□□□□ -0.08
UPF3A-203ENST00000474056 SCN1BQ07699 218 aa14.54□□□□□ -0.08
UPF3A-203ENST00000474056 ST3GAL4Q11206 333 aa14.54□□□□□ -0.08
UPF3A-203ENST00000474056 PRR31Q5SQ13 230 aa14.54□□□□□ -0.08
UPF3A-203ENST00000474056 LDLRAD2Q5SZI1 272 aa14.54□□□□□ -0.08
UPF3A-203ENST00000474056 ZNF626Q68DY1 528 aa14.54□□□□□ -0.08
UPF3A-203ENST00000474056 SATL1Q86VE3 508 aa14.54□□□□□ -0.08
UPF3A-203ENST00000474056 ZFP41Q8N8Y5 198 aa14.54□□□□□ -0.08
UPF3A-203ENST00000474056 ZNF485Q8NCK3 441 aa14.54□□□□□ -0.08
UPF3A-203ENST00000474056 ORAI1Q96D31 301 aa14.54□□□□□ -0.08
UPF3A-203ENST00000474056 GPER1Q99527 375 aa14.54□□□□□ -0.08
UPF3A-203ENST00000474056 CHCHD3Q9NX63 227 aaKnown RBP14.54□□□□□ -0.08
UPF3A-203ENST00000474056 ZNF281Q9Y2X9 895 aa14.54□□□□□ -0.08
UPF3A-203ENST00000474056 PCDHGB5Q9Y5G0 923 aa14.54□□□□□ -0.08
UPF3A-203ENST00000474056 A0A0G2JK05 382 aa14.53□□□□□ -0.08
UPF3A-203ENST00000474056 SLC33A1O00400 549 aaPredicted RBP14.53□□□□□ -0.08
UPF3A-203ENST00000474056 MAGEB3O15480 346 aa14.53□□□□□ -0.08
UPF3A-203ENST00000474056 MMP23AO75900 390 aa14.53□□□□□ -0.08
UPF3A-203ENST00000474056 TGFBR2P37173 567 aa14.53□□□□□ -0.08
UPF3A-203ENST00000474056 PROK1P58294 105 aa14.53□□□□□ -0.08
UPF3A-203ENST00000474056 AESQ08117 197 aa14.53□□□□□ -0.08
UPF3A-203ENST00000474056 MED21Q13503 144 aa14.53□□□□□ -0.08
UPF3A-203ENST00000474056 PLA1AQ53H76 456 aa14.53□□□□□ -0.08
UPF3A-203ENST00000474056 DMKNQ6E0U4 476 aaPredicted RBP14.53□□□□□ -0.08
UPF3A-203ENST00000474056 BRICD5Q6PL45 260 aa14.53□□□□□ -0.08
UPF3A-203ENST00000474056 TRAPPC6BQ86SZ2 158 aa14.53□□□□□ -0.08
UPF3A-203ENST00000474056 PXT1Q8NFP0 134 aa14.53□□□□□ -0.08
UPF3A-203ENST00000474056 OR11H6Q8NGC7 330 aa14.53□□□□□ -0.08
UPF3A-203ENST00000474056 FBLIM1Q8WUP2 373 aa14.53□□□□□ -0.08
UPF3A-203ENST00000474056 TNFAIP8L1Q8WVP5 186 aa14.53□□□□□ -0.08
UPF3A-203ENST00000474056 PGLYRP3Q96LB9 341 aa14.53□□□□□ -0.08
UPF3A-203ENST00000474056 FAM192AQ9GZU8 254 aa14.53□□□□□ -0.08
UPF3A-203ENST00000474056 NKX1-2Q9UD57 310 aaPredicted RBP14.53□□□□□ -0.08
UPF3A-203ENST00000474056 TBL2Q9Y4P3 447 aaKnown RBP14.53□□□□□ -0.08
UPF3A-203ENST00000474056 SESN1Q9Y6P5 492 aa14.53□□□□□ -0.08
UPF3A-203ENST00000474056 TSPAN9O75954 239 aa14.52□□□□□ -0.09
UPF3A-203ENST00000474056 CLPXO76031 633 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms